Gene

KWMTBOMO05981

Pre Gene Modal

BGIBMGA002891

Annotation

PREDICTED:_fidgetin-like_protein_1_[Papilio_polytes]

Location

Bomo_Chr10(-):15720113-15726997      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.5

CDS

ATGTCGACAGCTGATGAGAATGATAGACTTTTACTGAATTTTGAAAACATTCAGCAATACAAAAATTCTTTACCAAGTCAATCAAACATTTCCTCTAATGTCATACTCAACAGTGTTTGGAATGAAAACAAGAACATTCTCAATGAAAAAGTTGACGAAATCTTTAAATCCGCTAAAAGCCTTCTCCAAAACTCTGATAGTGAGTTGCATATCAGAACATGGAAATCATCCCTAAGAACTCTAGATCCTGAAATTGGCAAAAATTTTACTATTGAAGAACCCGTTCAAGACTTAGATTTTACAAAAGAAGAACTGGAAAATAAAGCACATAAAAGTAATGTAGCTAAAATTACATTTAAGACTGCAAAAGAACAATTGCTGGCATCTAATCCTGCTGCGAGAAGGACTCTCGGTACTTCTAGGAAAGCTCAAGCCAAGTTTGTGTCTCCCATGATCGGAGCTGTTACTCTAGAAAAACAGGATTCACAAGAAACAGAAATAACTGATGAAAGATTAAAGCATATTGATCCTAAAATGATTGAGTTAATTGAGAGTGAAATTATTGATAAAGGGACACCTGTTAGTTGGGAAGACATTGCCGGGCTGCAGTTCGCCAAGTCTGTGATCCAAGAGGCGGTAGTGTGGCCGCTGCTGAGACCGGACATCTTCACTGGACTGCGGCGGCCCCCCACCGGGATACTGCTGTTCGGGCCACCGGGAACCGGGAAAACATTGATTGGTAAATGCGTGGCGGCGCAGTGCAAGGCTACGTTCTTCAGCATCTCGGCGTCCTCGCTGACGTCCAAGTGGATCGGCGACGGAGAGAAGATGGTGCGCGCGCTGTTCGCAGTGGCGCGGTGCCGCCAACCCGCGGTGATATTCATAGACGAAATAGACTCGTTGCTGACCCAACGCAGCGACTCGGAGCACGAAGCCACCCGGAGAATCAAAACTGAGTTCCTCGTACAATTCGATGGTGCAGCTACAAGTGAAGAAGACAGACTTCTAATAGTTGGCGCGACCAATCGTCCCCAGGAGTTAGACGAAGCTGCCCGCAGGAGACTCGTCAAGCGGCTATACATACCTCTACCAGAAACTGACGCAAGAAAACAAATAATAATGAATTTGCTAAGGAACGAAAACAATGAACTGACGCCGGACCAAATATCGGAAATAGCGGACCTAACTGAAGGGTACTCCGGAGCGGACATGAAGTCTCTGTGCTGCGAGGCTGCCATGGGCCCCGTGCGCGCCGTGCCTCTGTCGCAGATCCTCAACGTCGACCGAGACAAGGTGCGACCAGTTTGTCTCAAAGATTTTACCAGTGCGTTACAAAGGGTCAAGCCGAGTGTATCGCAAGATGATTTGGGACAGTACATCAAATGGAATAAAACTTATGGTCAAGGATTTTAA

Protein

MSTADENDRLLLNFENIQQYKNSLPSQSNISSNVILNSVWNENKNILNEKVDEIFKSAKSLLQNSDSELHIRTWKSSLRTLDPEIGKNFTIEEPVQDLDFTKEELENKAHKSNVAKITFKTAKEQLLASNPAARRTLGTSRKAQAKFVSPMIGAVTLEKQDSQETEITDERLKHIDPKMIELIESEIIDKGTPVSWEDIAGLQFAKSVIQEAVVWPLLRPDIFTGLRRPPTGILLFGPPGTGKTLIGKCVAAQCKATFFSISASSLTSKWIGDGEKMVRALFAVARCRQPAVIFIDEIDSLLTQRSDSEHEATRRIKTEFLVQFDGAATSEEDRLLIVGATNRPQELDEAARRRLVKRLYIPLPETDARKQIIMNLLRNENNELTPDQISEIADLTEGYSGADMKSLCCEAAMGPVRAVPLSQILNVDRDKVRPVCLKDFTSALQRVKPSVSQDDLGQYIKWNKTYGQGF

Similarity

Belongs to the AAA ATPase family.

Uniprot

H9J056   A0A2H1VSZ2   A0A3S2TTP5   S4P8E6   A0A194Q9R3   A0A2A4J240   + More
A0A212FCE1   Q7PNH8   A0A182TB16   Q16WD0   A0A1S4FLU1   A0A182H821   A0A182W7M9   A0A182XZQ1   A0A182MF44   A0A146L3F9   A0A0K8T9N3   A0A182TGL4   A0A182IZ07   A0A182GXW7   A0A182NTE9   A0A182JVN0   A0A182IED8   A0A182X1F8   A0A1S4GW68   A0A182L2M3   A0A182Q7N0   A0A2J7QHY3   A0A182UM98   A0A0T6B0G4   A0A182RU68   W5JEG7   A0A067RIE0   A0A023F231   D6X4S0   A0A154PEE6   A0A084W7K8   A0A1Y1KPX1   N6TJE9   U5EUR3   A0A0M8ZU70   A0A182F1B9   A0A1S3IGH9   A0A3Q4HRB9   A0A195CJ76   A0A1S3JHD2   A0A3Q2WRF7   A0A3P8QG59   A0A3P9C0X3   A0A3B4F883   E9IKX9   A0A3Q1IEH3   A0A3S1B1R3   A0A3Q1FPF6   A0A151J3K8   A0A151HZH7   A0A158NDM2   A0A3Q0QXT0   A0A3P8RNG7   A0A1B6ERR5   A0A3B4VA14   A0A3B4YGF3   A0A2U9CE67   A0A1B6LYI3   A0A3Q3GBT2   C3YW86   A0A2A3EAD5   K4FUF0   Q4T5A1   I3KZM4   A0A3B4ZGV4   A0A3Q1ALV0   A0A3B4BD04   A0A2D0QL91   A0A0F8C3Z4   A0A088A325   A0A151X906   B0W0A7   B0XF07   A0A3Q3MKU5   A0A369SAM6   A0A3P8VJ85   A0A0N8A7S7   A0A3Q3JF94   A0A3B3YZP3   A0A3B3UW75   A0A195F455   A0A3B3E094   A0A3N0XYR1   A0A1Q3F4J7   A0A3P9NB70   A0A0P5K2T4   B3DGU1   A0A0P5CHN0   E0VN48   A0A3B4DF19  

Pubmed

19121390    23622113    26354079    22118469    12364791    17510324    + More
26483478    25244985    26823975    20966253    20920257    23761445    24845553    25474469    18362917    19820115    24438588    28004739    23537049    25186727    21282665    21347285    18563158    23056606    15496914    25463417    25835551    30042472    24487278    29451363    23594743    20566863   

EMBL

BABH01018974    BABH01018975    ODYU01003953    SOQ43344.1    RSAL01000002    RVE54971.1    + More
GAIX01005976    JAA86584.1    KQ459472    KPJ00151.1    NWSH01003683    PCG65929.1    AGBW02009199    OWR51402.1    AAAB01008964    EAA12156.5    CH477570    EAT38889.1    JXUM01028692    KQ560829    KXJ80713.1    AXCM01000920    GDHC01015558    JAQ03071.1    GBRD01003564    JAG62257.1    JXUM01020887    JXUM01020888    KQ560584    KXJ81797.1    APCN01005201    AXCN02000707    NEVH01013964    PNF28163.1    LJIG01022445    KRT80574.1    ADMH02001723    ETN61295.1    KK852458    KDR23557.1    GBBI01003723    JAC14989.1    KQ971380    EEZ97654.2    KQ434889    KZC10239.1    ATLV01021261    KE525315    KFB46202.1    GEZM01081273    JAV61725.1    APGK01035525    KB740927    KB631762    ENN77998.1    ERL85920.1    GANO01003755    JAB56116.1    KQ435878    KOX70076.1    KQ977720    KYN00487.1    GL764026    EFZ18713.1    RQTK01001001    RUS72904.1    KQ980275    KYN17018.1    KQ976664    KYM78293.1    ADTU01001047    GECZ01029130    JAS40639.1    CP026257    AWP14360.1    GEBQ01011219    JAT28758.1    GG666560    EEN55415.1    KZ288322    PBC28169.1    JX053327    AFK11555.1    CAAE01009347    CAF91931.1    AERX01006557    KQ042804    KKF10447.1    KQ982402    KYQ56851.1    DS231817    EDS39646.1    DS232886    EDS26355.1    NOWV01000037    RDD43534.1    GDIP01174121    JAJ49281.1    KQ981855    KYN34864.1    RJVU01057857    ROK15766.1    GFDL01012561    JAV22484.1    GDIQ01216108    JAK35617.1    BX890571    BC162519    AAI62519.1    GDIP01174120    JAJ49282.1    DS235332    EEB14814.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000218220    UP000007151    UP000007062    + More
UP000075901    UP000008820    UP000069940    UP000249989    UP000075920    UP000076408    UP000075883    UP000075902    UP000075880    UP000075884    UP000075881    UP000075840    UP000076407    UP000075882    UP000075886    UP000235965    UP000075903    UP000075900    UP000000673    UP000027135    UP000007266    UP000076502    UP000030765    UP000019118    UP000030742    UP000053105    UP000069272    UP000085678    UP000261580    UP000078542    UP000264840    UP000265100    UP000265160    UP000261460    UP000265040    UP000271974    UP000257200    UP000078492    UP000078540    UP000005205    UP000261340    UP000265080    UP000261420    UP000261360    UP000246464    UP000261660    UP000001554    UP000242457    UP000007303    UP000005207    UP000261400    UP000257160    UP000261520    UP000221080    UP000005203    UP000075809    UP000002320    UP000261640    UP000253843    UP000265120    UP000261600    UP000261480    UP000261500    UP000078541    UP000261560    UP000242638    UP000000437    UP000009046    UP000261440   

PRIDE

H9J056   

Pfam

PF17862   AAA_lid_3        + More
PF00004   AAA
PF09336   Vps4_C
PF11799   IMS_C
PF18439   zf_UBZ
PF00817   IMS

Interpro

IPR027417   P-loop_NTPase        + More
IPR003960   ATPase_AAA_CS       
IPR003959   ATPase_AAA_core       
IPR041569   AAA_lid_3       
IPR003593   AAA+_ATPase       
IPR015415   Vps4_C       
IPR001126   UmuC       
IPR017961   DNA_pol_Y-fam_little_finger       
IPR036775   DNA_pol_Y-fam_lit_finger_sf       
IPR041298   Znf_UBZ       

SUPFAM

SSF52540   SSF52540        + More
SSF100879   SSF100879       

Gene 3D

3.30.1490.100    

ProteinModelPortal

H9J056   A0A2H1VSZ2   A0A3S2TTP5   S4P8E6   A0A194Q9R3   A0A2A4J240   + More
A0A212FCE1   Q7PNH8   A0A182TB16   Q16WD0   A0A1S4FLU1   A0A182H821   A0A182W7M9   A0A182XZQ1   A0A182MF44   A0A146L3F9   A0A0K8T9N3   A0A182TGL4   A0A182IZ07   A0A182GXW7   A0A182NTE9   A0A182JVN0   A0A182IED8   A0A182X1F8   A0A1S4GW68   A0A182L2M3   A0A182Q7N0   A0A2J7QHY3   A0A182UM98   A0A0T6B0G4   A0A182RU68   W5JEG7   A0A067RIE0   A0A023F231   D6X4S0   A0A154PEE6   A0A084W7K8   A0A1Y1KPX1   N6TJE9   U5EUR3   A0A0M8ZU70   A0A182F1B9   A0A1S3IGH9   A0A3Q4HRB9   A0A195CJ76   A0A1S3JHD2   A0A3Q2WRF7   A0A3P8QG59   A0A3P9C0X3   A0A3B4F883   E9IKX9   A0A3Q1IEH3   A0A3S1B1R3   A0A3Q1FPF6   A0A151J3K8   A0A151HZH7   A0A158NDM2   A0A3Q0QXT0   A0A3P8RNG7   A0A1B6ERR5   A0A3B4VA14   A0A3B4YGF3   A0A2U9CE67   A0A1B6LYI3   A0A3Q3GBT2   C3YW86   A0A2A3EAD5   K4FUF0   Q4T5A1   I3KZM4   A0A3B4ZGV4   A0A3Q1ALV0   A0A3B4BD04   A0A2D0QL91   A0A0F8C3Z4   A0A088A325   A0A151X906   B0W0A7   B0XF07   A0A3Q3MKU5   A0A369SAM6   A0A3P8VJ85   A0A0N8A7S7   A0A3Q3JF94   A0A3B3YZP3   A0A3B3UW75   A0A195F455   A0A3B3E094   A0A3N0XYR1   A0A1Q3F4J7   A0A3P9NB70   A0A0P5K2T4   B3DGU1   A0A0P5CHN0   E0VN48   A0A3B4DF19  

PDB

3D8B     E-value=3.98394e-120,     Score=1105

KEGG

101739486    K22766 fidgetin-like protein 1 [EC:3.6.4.-] | (RefSeq) fidgetin-like protein 1

GO

GO:0005524   GO:0003684   GO:0006281   GO:0005634   GO:0031122   GO:0008568   GO:0016887   GO:0010569   GO:0006412   GO:0005622   GO:0008270   GO:0006508   GO:0007264   GO:0008026   GO:0016597  

Length:

470

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00264

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00646

outside

1  -  470

 

 

Pi

14.787193

Theta

16.934848

Tajima's D

-0.523827

CLR

10.222698

CSRT

0.24308784560772

Interpretation

Uncertain