Gene

KWMTBOMO05976  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002894

Annotation

PREDICTED:_GTP-binding_protein_1_[Amyelois_transitella]

Location

Bomo_Chr10(-):15674969-15680517      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.708

CDS

ATGGACAGCGTACCAGAATCTCCGATTAAGGCGATTTCCTTAACTGAGGATGAAGCCTTCGTAGAAAGCGAAACAGATTATTCCAGTATTAGAGGGAAGATGGTGATGGTGAGTCCAAATGCTGATGAGTATGAGTTACTCCGTAAACAGCTATTGGAAAGGCTTGAAGCTGGAAATGGCGAGATCATTTATGATATTGGACATGGAGAAGATGGTCGGGGCTTAACAGAGGATGAATACAATGCGTCCCTAGCAACGCTTCATTCATTGGTGGCAAGTGAGAGAGTGTCATGTGTTGAGCTGAGGAGGTGGGAGTGTGGAAGTGGGCTCACCGGCCAATACCTCCTTAGGACGGAGCTTGACAATAATGACTTTATGGAGATTAGAGTGGCTGTGGTGGGTAACGTGGACGCTGGCAAGTCCACGCTGCTCGGGGTCCTCACGCACGGAGAACTGGACAACGGTCGAGGGTATGCACGACAGAGGCTGTTCCGCCACAAACACGAGATGGAGAGCGGGAGGACCAGCTCCGTGGGGAACGACATATTGGGCTTTGATAATATGGGTAATGTTGTGAATAAGCCAGATCACGGCACTCTTGACTGGGTGAAGATCTGCGAGAAGTCTTCCAAAGTGATAACGTTTATAGACCTAGCTGGACACGAGAGGTACCTCAAAACTACGGTCTTTGGGATGACGGGACACGCTCCCGACTTTGGGATGCTCATGGTTAGTGTTGTAATGCTAAAGATTTTTTTTTTATTCCTTGGATGGGTGAACGAGCTCATAGTCAACCAAGTATTAAGCGGTTACCGGAGCCCATAG

Protein

MDSVPESPIKAISLTEDEAFVESETDYSSIRGKMVMVSPNADEYELLRKQLLERLEAGNGEIIYDIGHGEDGRGLTEDEYNASLATLHSLVASERVSCVELRRWECGSGLTGQYLLRTELDNNDFMEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGYARQRLFRHKHEMESGRTSSVGNDILGFDNMGNVVNKPDHGTLDWVKICEKSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMVSVVMLKIFFLFLGWVNELIVNQVLSGYRSP

Uniprot

H9J059   A0A2H1WLW7   A0A3S2PLM8   A0A212FCG4   A0A194Q3N7   A0A194QR39   + More
A0A2J7QBF2   A0A1B6CKT1   B0XK56   T1DPK0   T1DRM8   T1DGA0   A0A232EF70   A0A2J7QBF1   A0A2M3ZAL8   A0A336M7T6   A0A0K8TRU4   A0A1S4EVC2   A0A310SQ58   A0A182SYQ0   Q17PS8   A0A2S2Q811   A0A2P8YJR4   A0A182YC26   A0A151JPI4   A0A154P339   A0A0K8VFQ8   A0A151X1D2   F4W9Y8   E9I9K4   A0A0J7KWN3   A0A158NTC6   A0A182GEP4   A0A151I5T8   A0A023EVQ5   A0A1Q3FWW4   D3TL06   E2B9X0   A0A1A9YD13   A0A1B6IFS0   A0A1B0C274   A0A2M4BFK5   A0A2M4BFK4   A0A151IPM6   A0A1B0GBU0   A0A1A9Z7L5   A0A1A9WQP9   A0A2M4ADA9   A0A1S3DT58   A0A151JU39   A0A1I8Q935   A0A2H8TN13   W5JV36   A0A182FCW7   A0A182RKW9   T1HQL4   A0A084WCP0   W8BM14   V9ICL1   A0A0C9S099   A0A2S2NKW1   A0A1A9VJ01   A0A0A1XH05   A0A1B0EVS3   J9JW71   A0A182QTD8   A0A182JEF1   A0A1B0GM92   A0A087ZQ35   A0A0N0BHA2   A0A023F5K2   A0A0V0G492   A0A0P4VW78   T1PGX4   A0A1I8N4I0   A0A069DZE2   A0A182NQ71   A0A1B6MMP3   A0A182P8U1   A0A1B6G1C6   A0A034WU37   A0A0K8U795   A0A224XL22   A0A182K5M9   A0A182WK12   A0A0A9XRM5   A0A182MGK0   A0A182LBN9   A0A182VJR9   Q7Q9H9   A0A182XEU0   A0A182TN19   A0A182HNW7   A0A2A3E0S5   A0A1J1HK92   E0VCV1   A0A1W4XCJ5   A0A2R7VR23   A0A1Y1JR16  

Pubmed

19121390    22118469    26354079    24330624    28648823    26369729    + More
17510324    29403074    25244985    21719571    21282665    21347285    26483478    24945155    20353571    20798317    20920257    23761445    24438588    24495485    25830018    25474469    27129103    25315136    26334808    25348373    25401762    26823975    20966253    12364791    14747013    17210077    20566863    28004739   

EMBL

BABH01018980    ODYU01009515    SOQ54007.1    RSAL01000002    RVE54976.1    AGBW02009199    + More
OWR51407.1    KQ459472    KPJ00147.1    KQ461175    KPJ07973.1    NEVH01016298    PNF25910.1    GEDC01023231    JAS14067.1    DS233709    EDS31202.1    GAMD01001865    JAA99725.1    GAMD01001859    JAA99731.1    GALA01001756    JAA93096.1    NNAY01005096    OXU17005.1    PNF25911.1    GGFM01004836    MBW25587.1    UFQT01000669    SSX26336.1    GDAI01000521    JAI17082.1    KQ761155    OAD58181.1    CH477189    EAT48763.1    GGMS01004680    MBY73883.1    PYGN01000545    PSN44488.1    KQ978719    KYN29044.1    KQ434809    KZC06242.1    GDHF01014939    JAI37375.1    KQ982585    KYQ54178.1    GL888034    EGI68989.1    GL761846    EFZ22690.1    LBMM01002353    KMQ94937.1    ADTU01025819    ADTU01025820    JXUM01011747    JXUM01011748    KQ560337    KXJ82981.1    KQ976412    KYM90523.1    GAPW01000452    JAC13146.1    GFDL01002945    JAV32100.1    EZ422096    ADD18301.1    GL446605    EFN87557.1    GECU01021936    JAS85770.1    JXJN01024376    GGFJ01002695    MBW51836.1    GGFJ01002694    MBW51835.1    KQ976832    KYN07987.1    CCAG010005890    GGFK01005450    MBW38771.1    KQ981885    KYN33844.1    GFXV01003762    MBW15567.1    ADMH02000363    ETN66820.1    ACPB03000491    ATLV01022798    KE525337    KFB47984.1    GAMC01015857    GAMC01015856    JAB90699.1    JR038760    AEY58397.1    GBYB01013935    GBYB01013936    JAG83702.1    JAG83703.1    GGMR01005158    MBY17777.1    GBXI01004061    GBXI01001561    JAD10231.1    JAD12731.1    AJVK01024086    ABLF02028980    AXCN02001019    AJVK01024087    KQ435756    KOX75942.1    GBBI01002267    JAC16445.1    GECL01003286    JAP02838.1    GDKW01001650    JAI54945.1    KA647138    AFP61767.1    GBGD01000795    JAC88094.1    GEBQ01002796    JAT37181.1    GECZ01013535    JAS56234.1    GAKP01001095    JAC57857.1    GDHF01029787    JAI22527.1    GFTR01007583    JAW08843.1    GBHO01021318    GBHO01021317    GBRD01017283    GDHC01019695    GDHC01007877    JAG22286.1    JAG22287.1    JAG48544.1    JAP98933.1    JAQ10752.1    AXCM01012095    AAAB01008900    EAA09394.4    APCN01002799    KZ288507    PBC25144.1    CVRI01000008    CRK88471.1    DS235065    EEB11207.1    KK854023    PTY09588.1    GEZM01103018    GEZM01103016    JAV51612.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000053240    UP000235965    + More
UP000002320    UP000215335    UP000075901    UP000008820    UP000245037    UP000076408    UP000078492    UP000076502    UP000075809    UP000007755    UP000036403    UP000005205    UP000069940    UP000249989    UP000078540    UP000008237    UP000092443    UP000092460    UP000078542    UP000092444    UP000092445    UP000091820    UP000079169    UP000078541    UP000095300    UP000000673    UP000069272    UP000075900    UP000015103    UP000030765    UP000078200    UP000092462    UP000007819    UP000075886    UP000075880    UP000005203    UP000053105    UP000095301    UP000075884    UP000075885    UP000075881    UP000075920    UP000075883    UP000075882    UP000075903    UP000007062    UP000076407    UP000075902    UP000075840    UP000242457    UP000183832    UP000009046    UP000192223   

PRIDE

H9J059   

Pfam

PF00009   GTP_EFTU        + More
PF03144   GTP_EFTU_D2
PF03143   GTP_EFTU_D3

Interpro

IPR009001   Transl_elong_EF1A/Init_IF2_C        + More
IPR000795   TF_GTP-bd_dom       
IPR039263   GTPB1       
IPR027417   P-loop_NTPase       
IPR009000   Transl_B-barrel_sf       
IPR035531   GTPBP1-like       
IPR004161   EFTu-like_2       
IPR004160   Transl_elong_EFTu/EF1A_C       

SUPFAM

SSF52540   SSF52540        + More
SSF50465   SSF50465       
SSF50447   SSF50447       

CDD

cd04165  GTPBP1_like

ProteinModelPortal

H9J059   A0A2H1WLW7   A0A3S2PLM8   A0A212FCG4   A0A194Q3N7   A0A194QR39   + More
A0A2J7QBF2   A0A1B6CKT1   B0XK56   T1DPK0   T1DRM8   T1DGA0   A0A232EF70   A0A2J7QBF1   A0A2M3ZAL8   A0A336M7T6   A0A0K8TRU4   A0A1S4EVC2   A0A310SQ58   A0A182SYQ0   Q17PS8   A0A2S2Q811   A0A2P8YJR4   A0A182YC26   A0A151JPI4   A0A154P339   A0A0K8VFQ8   A0A151X1D2   F4W9Y8   E9I9K4   A0A0J7KWN3   A0A158NTC6   A0A182GEP4   A0A151I5T8   A0A023EVQ5   A0A1Q3FWW4   D3TL06   E2B9X0   A0A1A9YD13   A0A1B6IFS0   A0A1B0C274   A0A2M4BFK5   A0A2M4BFK4   A0A151IPM6   A0A1B0GBU0   A0A1A9Z7L5   A0A1A9WQP9   A0A2M4ADA9   A0A1S3DT58   A0A151JU39   A0A1I8Q935   A0A2H8TN13   W5JV36   A0A182FCW7   A0A182RKW9   T1HQL4   A0A084WCP0   W8BM14   V9ICL1   A0A0C9S099   A0A2S2NKW1   A0A1A9VJ01   A0A0A1XH05   A0A1B0EVS3   J9JW71   A0A182QTD8   A0A182JEF1   A0A1B0GM92   A0A087ZQ35   A0A0N0BHA2   A0A023F5K2   A0A0V0G492   A0A0P4VW78   T1PGX4   A0A1I8N4I0   A0A069DZE2   A0A182NQ71   A0A1B6MMP3   A0A182P8U1   A0A1B6G1C6   A0A034WU37   A0A0K8U795   A0A224XL22   A0A182K5M9   A0A182WK12   A0A0A9XRM5   A0A182MGK0   A0A182LBN9   A0A182VJR9   Q7Q9H9   A0A182XEU0   A0A182TN19   A0A182HNW7   A0A2A3E0S5   A0A1J1HK92   E0VCV1   A0A1W4XCJ5   A0A2R7VR23   A0A1Y1JR16  

PDB

5LZZ     E-value=0.0251646,     Score=86

KEGG

101740168    no KO assigned | (RefSeq) GTP-binding protein 1

GO

GO:0005525   GO:0003924   GO:0003746   GO:0006414  

PANTHER

PTHR43721:SF9  

Length:

274

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.51422

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04895

outside

1  -  241

TMhelix

242  -  264

inside

265  -  274

 

 

Pi

5.119236

Theta

11.964895

Tajima's D

-1.644641

CLR

16.970447

CSRT

0.039798010099495

Interpretation

Uncertain