Gene

KWMTBOMO05958

Pre Gene Modal

BGIBMGA002804

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]

Location

Bomo_Chr10(+):15489791-15496135      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.435 Mitochondrial   Reliability : 1.486

CDS

ATGCAGCGAGTGACGAGACTCCCGTTGTTGATGGACGCGGTACTGAAGAACCTCTCATCAGAAGACGAAGAGTATGAGGCGTGCATGCATGCACTAGCGACTCTGAACAATTACGTCCAGCAGTGCAACGAGGGCGCCCGCAACACGGAGCGCGTGGAGGAGATGTACCGACTGGCGCGCGTCATCGAGTTCCCGGCCGGCGTGCGCCACCCGCCCGACCTGGGGCCCGCCCTGGCGCGCCGGGACCGACGGCCGGTGAGGTGGCTGGTCCGGTCCGGCGAGATGACGCAGCTGGTGTGGAAGAATGACGAACTGAAGCTGACCTTCGGCAAGAAGTTCCACAAGGTTCCCCTGCACGTGTTCCTGTTCAACGACCTGCTCGTCGTCACCAAGAAGAAAGGCGAGGAGTCGTACGTGGCGGTGGACCACTGTCCGCGCTCGCTGCTGGAGGTGTGCAGCGCGGAGGGAGTGGCCGCCACCAAGCACGCGCTGCTCCTCACCCTCCTCGACAACCACGAGGGAAGGACCGTCGAAATGTTGATGTCGTGCGGCAGTGAGACGGAGGTGTCGCGATGGCGCGAGGCGCTGTGGCTGCCCGCCGCCGCGCCCGGGGAGGCGGTCTACGCCGGCTGGGACTGTCCGCAGGTGTGCGCGCTGTACGCGTACGCCGCCGCGCAGCCCGACGAGCTGTCGCTGGCCGAGGGCGACGTCGTCAACGTCACCAGGAAGACGGCCGAAGGCTGGTACTACGGCGAGCGCACCCGGGACGGGGAGGCGGGCTGGTTCCCCGGGGCCTACTCCGCCGAGATCGCGTCCCCGCACGTCCGGGCCCGCAACCTGCGACAACGGTACCGCCTGCTCGCGCTCTCCGGGACCTACCTAGGGAACAAGAGGAAGCTACTCTGA

Protein

MQRVTRLPLLMDAVLKNLSSEDEEYEACMHALATLNNYVQQCNEGARNTERVEEMYRLARVIEFPAGVRHPPDLGPALARRDRRPVRWLVRSGEMTQLVWKNDELKLTFGKKFHKVPLHVFLFNDLLVVTKKKGEESYVAVDHCPRSLLEVCSAEGVAATKHALLLTLLDNHEGRTVEMLMSCGSETEVSRWREALWLPAAAPGEAVYAGWDCPQVCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAYSAEIASPHVRARNLRQRYRLLALSGTYLGNKRKLL

Uniprot

H9IZW9   A0A2A4J8B5   A0A2H1VM05   A0A3S2P8J0   A0A212EIX4   A0A194QRK3   + More
A0A194Q3M9   A0A067RD85   A0A2J7PJJ6   A0A2J7PJH2   A0A1L8DM52   A0A1Y1JUK3   E9FZ04   A0A2J7PJH1   A0A1Y1JXM7   A0A1B0CX95   D6WZ80   A0A0P5BCR3   A0A0P5J3R5   A0A0P5BBT9   A0A0P5Y750   A0A0P5JFA2   A0A0P4ZSG1   A0A0P4ZU73   A0A0P6DXP6   A0A0P5FS70   A0A0P5E744   A0A0P5X9Y1   A0A0P5YS26   A0A0P5UDD3   A0A0N8CE79   A0A0P5K6I1   U4TUS1   A0A2R7WY38   A0A0P5S9R5   A0A0P6E515   A0A0N8AUC3   W8ALN0   A0A0P6C669   A0A0N7ZU47   A0A0P5YY12   A0A1A9V2W2   A0A0K8UVY5   A0A1A9ZFV8   A0A1B0B457   A0A1A9XK93   A0A0P5SFN4   A0A0P5XC98   W8AQR3   N6SS33   A0A1B6EVP9   A0A1B0FJS3   A0A1B6GC27   A0A1A9WPW5   A0A0P6GWF4   A0A182GMU3   A0A0A1X5J7   A0A336MZU7   A0A0M4EKA9   Q17LB9   A0A336LCD9   A0A336L3Q5   A0A0V0G4Y3   A0A0A1WWA0   A0A1I8M552   A0A1I8M555   W5JRM7   A0A0P4VNZ7   A0A182T1I5   A0A2S2R034   A0A1B6DUQ5   A0A2M4ADF1   A0A2M4ADY4   B0XEA0   A0A2M4ADP0   A0A182FF25   A0A1Q3F243   A0A1I8PY90   V5H3S2   B4KW86   A0A0P6J5W1   A0A2M4B9L7   A0A1I8M546   A0A0Q9XCC1   A0A182NHX3   A0A2H8U1M9   A0A1Q3G0V0   A0A0Q9WIX8   A0A1Q3G0Y3   A0A182J2P4   B4IYC1   A0A0R3P6N9   V5HKV1   B4H4E8   A0A1B6L190   Q29DU1   A0A182QAM3   A0A2S2R4S5   A0A0M4ER70   A0A069DXW9  

Pubmed

19121390    22118469    26354079    24845553    28004739    21292972    + More
18362917    19820115    23537049    24495485    26483478    25830018    17510324    25315136    20920257    23761445    27129103    25765539    17994087    18057021    26999592    15632085    23185243    26334808   

EMBL

BABH01018995    NWSH01002508    PCG68109.1    ODYU01003117    SOQ41472.1    RSAL01000002    + More
RVE54985.1    AGBW02014561    OWR41421.1    KQ461175    KPJ07964.1    KQ459472    KPJ00137.1    KK852575    KDR20999.1    NEVH01024947    PNF16488.1    PNF16487.1    GFDF01006629    JAV07455.1    GEZM01100186    JAV52969.1    GL732527    EFX87681.1    PNF16486.1    GEZM01100187    JAV52968.1    AJWK01033451    AJWK01033452    AJWK01033453    AJWK01033454    AJWK01033455    AJWK01033456    AJWK01033457    AJWK01033458    AJWK01033459    AJWK01033460    KQ971372    EFA09747.2    GDIP01186669    JAJ36733.1    GDIQ01205078    JAK46647.1    GDIP01186668    JAJ36734.1    GDIP01075227    JAM28488.1    GDIQ01203330    JAK48395.1    GDIP01212362    JAJ11040.1    GDIP01211411    JAJ11991.1    GDIQ01085928    JAN08809.1    GDIQ01250725    JAK01000.1    GDIP01147215    JAJ76187.1    GDIP01075226    JAM28489.1    GDIP01054388    JAM49327.1    GDIP01131867    JAL71847.1    GDIP01140415    JAL63299.1    GDIQ01189935    JAK61790.1    KB631594    ERL84522.1    KK855844    PTY24080.1    GDIP01142664    JAL61050.1    GDIQ01068335    JAN26402.1    GDIQ01242075    JAK09650.1    GAMC01019718    GAMC01019716    JAB86837.1    GDIP01008470    JAM95245.1    GDIP01212361    JAJ11041.1    GDIP01064932    JAM38783.1    GDHF01021487    JAI30827.1    JXJN01008178    GDIP01140414    JAL63300.1    GDIP01075225    JAM28490.1    GAMC01019717    JAB86838.1    APGK01059181    APGK01059182    KB741292    ENN70454.1    GECZ01027714    JAS42055.1    CCAG010018347    GECZ01009785    JAS59984.1    GDIQ01028499    JAN66238.1    JXUM01075753    KQ562904    KXJ74859.1    GBXI01011983    GBXI01008131    JAD02309.1    JAD06161.1    UFQT01004987    SSX35844.1    CP012525    ALC43647.1    CH477217    EAT47456.1    UFQS01001610    UFQT01001610    SSX11594.1    SSX31161.1    SSX11593.1    SSX31160.1    GECL01003023    JAP03101.1    GBXI01011140    JAD03152.1    ADMH02000549    ETN65933.1    GDKW01003735    JAI52860.1    GGMS01014168    MBY83371.1    GEDC01007888    JAS29410.1    GGFK01005490    MBW38811.1    GGFK01005668    MBW38989.1    DS232813    EDS25874.1    GGFK01005511    MBW38832.1    GFDL01013419    JAV21626.1    GANP01012839    JAB71629.1    CH933809    EDW18493.1    KRG06213.1    GDUN01000353    JAN95566.1    GGFJ01000614    MBW49755.1    KRG06212.1    KRG06214.1    GFXV01008176    MBW19981.1    GFDL01001625    JAV33420.1    CH940647    KRF84467.1    GFDL01001595    JAV33450.1    CH916366    EDV96571.1    CH379070    KRT08825.1    GANP01000108    JAB84360.1    CH479208    EDW31263.1    GEBQ01022504    GEBQ01015082    GEBQ01014081    GEBQ01001207    JAT17473.1    JAT24895.1    JAT25896.1    JAT38770.1    EAL30323.1    KRT08822.1    KRT08823.1    AXCN02000381    GGMS01015761    MBY84964.1    ALC44917.1    GBGD01000154    JAC88735.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000027135    UP000235965    UP000000305    UP000092461    UP000007266    UP000030742    UP000078200    UP000092445    UP000092460    UP000092443    UP000019118    UP000092444    UP000091820    UP000069940    UP000249989    UP000092553    UP000008820    UP000095301    UP000000673    UP000075901    UP000002320    UP000069272    UP000095300    UP000009192    UP000075884    UP000008792    UP000075880    UP000001070    UP000001819    UP000008744    UP000075886   

PRIDE

H9IZW9    V5H3S2    V5HKV1   

Pfam

PF00018   SH3_1        + More
PF00621   RhoGEF
PF14604   SH3_9
PF07653   SH3_2

Interpro

IPR001452   SH3_domain        + More
IPR035899   DBL_dom_sf       
IPR036028   SH3-like_dom_sf       
IPR000219   DH-domain       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       

SUPFAM

SSF48065   SSF48065        + More
SSF50044   SSF50044       

Gene 3D

1.20.900.10     2.30.29.30    

CDD

cd00160  RhoGEF

ProteinModelPortal

H9IZW9   A0A2A4J8B5   A0A2H1VM05   A0A3S2P8J0   A0A212EIX4   A0A194QRK3   + More
A0A194Q3M9   A0A067RD85   A0A2J7PJJ6   A0A2J7PJH2   A0A1L8DM52   A0A1Y1JUK3   E9FZ04   A0A2J7PJH1   A0A1Y1JXM7   A0A1B0CX95   D6WZ80   A0A0P5BCR3   A0A0P5J3R5   A0A0P5BBT9   A0A0P5Y750   A0A0P5JFA2   A0A0P4ZSG1   A0A0P4ZU73   A0A0P6DXP6   A0A0P5FS70   A0A0P5E744   A0A0P5X9Y1   A0A0P5YS26   A0A0P5UDD3   A0A0N8CE79   A0A0P5K6I1   U4TUS1   A0A2R7WY38   A0A0P5S9R5   A0A0P6E515   A0A0N8AUC3   W8ALN0   A0A0P6C669   A0A0N7ZU47   A0A0P5YY12   A0A1A9V2W2   A0A0K8UVY5   A0A1A9ZFV8   A0A1B0B457   A0A1A9XK93   A0A0P5SFN4   A0A0P5XC98   W8AQR3   N6SS33   A0A1B6EVP9   A0A1B0FJS3   A0A1B6GC27   A0A1A9WPW5   A0A0P6GWF4   A0A182GMU3   A0A0A1X5J7   A0A336MZU7   A0A0M4EKA9   Q17LB9   A0A336LCD9   A0A336L3Q5   A0A0V0G4Y3   A0A0A1WWA0   A0A1I8M552   A0A1I8M555   W5JRM7   A0A0P4VNZ7   A0A182T1I5   A0A2S2R034   A0A1B6DUQ5   A0A2M4ADF1   A0A2M4ADY4   B0XEA0   A0A2M4ADP0   A0A182FF25   A0A1Q3F243   A0A1I8PY90   V5H3S2   B4KW86   A0A0P6J5W1   A0A2M4B9L7   A0A1I8M546   A0A0Q9XCC1   A0A182NHX3   A0A2H8U1M9   A0A1Q3G0V0   A0A0Q9WIX8   A0A1Q3G0Y3   A0A182J2P4   B4IYC1   A0A0R3P6N9   V5HKV1   B4H4E8   A0A1B6L190   Q29DU1   A0A182QAM3   A0A2S2R4S5   A0A0M4ER70   A0A069DXW9  

PDB

1X6B     E-value=7.1545e-10,     Score=152

KEGG

101739343    K07525 neuronal guanine nucleotide exchange factor | (RefSeq) uncharacterized LOC101739343

GO

GO:0035023   GO:0005089   GO:0016021   GO:0031594   GO:0035011   GO:0007480   GO:0042734   GO:0046928   GO:0005515   GO:0005525   GO:0030131   GO:0005488   GO:0005622   GO:0007264   GO:0008026   GO:0016597  

Length:

301

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00271

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01991

outside

1  -  301

 

 

Pi

310.083485

Theta

207.3697

Tajima's D

1.432671

CLR

0

CSRT

0.767911604419779

Interpretation

Uncertain