Silkworm Genome Informatics Database

Gene

KWMTBOMO05956

Pre Gene Modal

BGIBMGA002800

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]

Location

Bomo_Chr10(+):15418661-15485160 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.946

CDS

ATGGAAGCTGTACATACAAAAGAACTTATAATAATCAGTGACGACGCAAAACAACACGGCACGGTCAAGGCATTGCTGAGAAACTTCAGAGTGACCGAAAAAGAAATGGCTATCAAAGAGAACCAAAACGATACTAACAAATGTGTTTACTCGGTACCCATAACGCCAGCGATACAAACAGCTAGAACGAAATCAATTAGCGAAGCGAAGAAAGCCTTCCTGAATGCAACAGTTAGTCCTAATGCCCCTCCCACCAAACCGGACAAAAGGATCGAACCAACAGTACATTATGCACAACTAGATATTATAACGAAAAGCGAAGACACGAGAAGCACTGGCGGAGGACATGACTTAAAAACATCAAGTGATGTTAAGAGCAAAGAAACGCCAAACGAAGCGACCCACGCTGGGAGTCATGTTAAGAGAAAAATAGATCCGAATCAAAGAAAAGTCAGCTTTAAAATTAAAACTGCCGGAACATTCCACAGGAGGCCGCCTATCGCTGCGAAAACTGTCACCGTGGCGACCAGCAATGTTTCAGAGCTCACACATAAATTTAATCTATTAAATCAACCGCACAGTTCCCCTAAGCATTCAAAACTCGCCAAAACAATAGAAGGCCTACAAACAGCGCGGCGTTCACTCAGTAATAGCTCTACGCCGTCATCAACGCTCAGTTCCAGCCCTAACATCAAAATAGTGGTTCGTCAGAAGCGGGGTTCTAAAAAGAGAAATCACAGAAAAAGATGTTCTAGCATGGACTCTATAGACAAATTGATAATCACGGATAAAGAATCTACGAAAATCCAAGTCATACGCTCTAAATCTGACGGAATCAAAGCACCGAAGTACCAAAGCTCGAAAAAGAAGTTAAAATACCACGATTCGAACGAACATCAAAACGGGTCTGATTCAGTCGACGGTCTTGCCGCTAAATCTGTAATTAATGAACCAGAGAAAGATATAAAAGCAACAGGAAACAATGTCAAAAGTGTTATCAAGAAATTTGAATGTGAAATAAATGCTCAAACAATTAATACAAATACGATTAAGAAGCAACCTGATCCAACAAAAAGTATAGTACCATTAAAAGAGAAACCCAAAGTACCTGAGAAAAAATCGTCGATAGTGTTAACAAAGAACATTGTCGTTAAAGACGGCATTCCAAAGATTAAGACGATTAGACCGATTTCGAATTCTAATGAAACTCCAAGAAAGACACAGGCGGCAAATCCTGATTCAACTTTGGTCCCAAAAAAGAAGGAACTAATATACGATAGAAAAAAATACAAAACAAATTACATACACACGGAAAAGCTTCCATTAAAGGTGGTGGAAATAATTCCCGAGGACATTGAAAATACTTCTAGCTTAGTAAAAGACCAAATAATTACAAATATATCAAATGAAACTTCGATAAATATCACTCGTGTATCTGTCATAACGGAGTCGAAGGCACAAGACGTAGAACCACCGATAATTCCCAATGAATCTTTTTTATGGCGTAGGAAAAGCAGCACCCAAATTTACGCAGAATCTGATTTATCATCGTCTGCTGATATATCATCATGCAGTTTAATAACAATCACTACAAATGAAAATTCCATATCTTGTGACGAAGCCGCAGAAGAACAGTCGCAAACCATTGAAGTGAAAGAATCTCAGATGAATGTGAACGCTTGTGAGAAGAATATGGATTTTGAAAGCGATTTAGTCGAAGCATACAACAAGGAAATTTTAGTTGGGTACACCCCTAAACCTCAGAAGGAGCCAGTCATAGAAGACGATTATGAGGTATTAGAACCCAGGGAATCTGAAAACATCGTTGTAATTCCAGTCAAACAGGTCGATATGACATCTAAAATGAACTGCCCCTTGCCTGAAATACCAAAACAAACTAGTACTGAGTCATCCGAATCTGACGATAAAGAAAACATATATCAGTGTCTATTAGAGATGAGGTCACACCCTGAAGGCGACGAGAGCAGTCTCCATAATTATGAACTATGCGAAAACGAATTAGAAGAACGAACGCGAGGAGACGGAGACAGCGATGACGGATACGAATACTGCAAATCGCCGATAAAACCTTACTGCCTAACGTCCAGCTCAGGAATACAAATAGCCGAAGACTACAAACCCTACAATAAAGATAACAACAAAAACTATGCTATTTCAAAGTCCGTAAGCGGCACTTCCACCGTCAGCTACGAAAAGATCGGATGCGATCGAATATACGAGAAGATCCCGCCGCGACCTCCGAAATCCAAAGACAGCAGTCCCACTTACAGCGACAGGCACTCTTTCATATCGGACTATATCGAAAGCGAAAATATATATGATACAATAAAGCATGGCGATGGATCTTTATCGCACTGCTACGAGAGCATACCAAACAGTCCGAGCATGGTGAAATTGCGGAATAACTTGAAGAAGCAGCTGGCGTCTGCTGTTCAGAAGCGATTGTCCTTCGATACTGTCTCTAACATTAGCCAGTCGACTTTGTCGAGCGAACAGAAAACGAATAGCATATACGGCCAGAGATCAGTGATAAGCTTTAATGGACAAGAAGTGGCTTTTCAAGTGCCGTGCAGCGAGACCAGTGTCAGTGATAGAAGCGATCGTAGCGACGATTGGGTTGATGTTTCTGATGAGGAGAAAAATGAACAGAAAATTGTCATTGTACGAGAAAGGAGCAGAGGCAGAAAGAGCCCTATCAGCTGGTCGCAGAAAGTAAGGCATCAATGGCTGAATTCTCCAAAGAAAAGTGATAGCAAAGAATGCGACAGCAGCGACTCGTCTGGTCATCTGTACGAGTCGCTGGAGCCGGCGCCCTCGCAGCCGCCGCGGGCTCCGGTCGTGCCGATCGAGGAAGACTTCGATTCCTTCGACAGCGACTCCGATCCTGATGACAATGACAAGACACTTACGTACGCTCAGGCTCCGCCGTTGCCGGCTTCGAAGCTACCAACGCCACCTAGCGGCGGACAATATACACTCACCAAGATAGCCAGCGCCGCCCAGCGAACAATGAAATCAATCAAACGAAACTTAACAAAAAGATATTCAGTCGCAATGGACGGGAAGTCGTTTACTAAATCATCACAAAACGGCACGTACGAAGCGCCAACGAAAACGAAAAAAACACCAATATACGCAAACTACGAGAAGCCAGAAATCCAGAACGTTTACAGCAATATCAGCTTCAACGACACGAAACCTGTACTCAATAAGGCGGAGAATCCCGTGAAAGCTGAATTCCAAGAAGAGCTGAAATATGCAGTAAGCGAAAAAAGGCCGAACATTAGTGATGTTCCACCTCCGTTACCGGAAAAACCTCCGCCGGAGAGACCAATGGCTTCGGCTTGTGACATGAAGAAGGACAGCGGAACTTTGTCGAGGAAAGCGTACTTTTCGTTCAAATCCCGCTTCAGAAGAGCGACATCGTTGGCCGTCGACATTAACGATGTCCCAAGCGCTTTGAAGATCACCAATTCCACTTTTTATTTGACCGACTCAATGGATGGCGACTCCGGTTTCAGCAATTGCGACGGTGGCCAGGCCAGCAGCAGCGAGACCCCCCCGTCCCGCCGCGGAGAAGGTACGCTCCGCTACGAGTCGACCCCGTGCCTCGCTCTGGAGCGCCCCTCCGTCCCGCCCCCGCCCCCGCCCACTGACATTAGCGCTGTCAACGAAGAGTTGAAGCGACTCCTGCCGACGTTGGCGCGCAAGGACAAGAGTCCCAGAGCCCGGACGTCCTGGTACGCCGAGTGCGGAGCGGACGCTACTTCGAACACCGCCTCGACATCCTGGTACGCGGAAGCTGGTCTGTACCAAGCCGGGAACCTCTCGACATCCTCCGGCGCGTCTTCAGGGTCGCACCCCGCCTCGCCGCTCCCCCGGTCGCTGTTCACGCACGAGCCGCTCTACCAGTTCTATAACGCAGCCAAAGTCGAGTCGATCTACCGGGAGACCGGCGACTCGGACTCCGACGGGTACGAGGCGGGCGTGCCGGGCGCGCAGGCCCCGCCCCCCGAGCCGGCGCGGCCGTCCGCCATGGCGCTGGTGTCGCCGCGCGGGCCGGCGCGCACGCTGTGGTGCGAGGTCCCGGAGGTCCTCAACTCCGCTGTGCTCAGCTCACTGGCGCCGGCACAGAAACGCCTGCAAGAGGCGAAATTCGAGCTGCTCACCTCTGAAGCTTCGTACCTGAACTCTCTGAACGTGTTGGAATCTCAGTTCGTGGCTCATCCAGCGTTCAGGGACCCACACATCCTACCACGGGACGACTGGGAGATACTCTTCTCCACCATACTGCCAGTACGGAAATGCTCGCAGTTGCTCATGAATGAATTGGAAAAGTGCTGGCAAGAGAACATTCTGCTGCAAGGGATCTGCGACATAGTGCGGCACCACGCCGAGGAGCATTTCCAGGTCTACGTCAAGTACTGCGAGAACCAGACGCTGATGGTCAAAGCGCTGCAGAGGCTTCGGGAGAGACCGGCTTTCGCTACGGCCCTTAAGAGAGTGAGGTAG

Protein

MEAVHTKELIIISDDAKQHGTVKALLRNFRVTEKEMAIKENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVSPNAPPTKPDKRIEPTVHYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAGSHVKRKIDPNQRKVSFKIKTAGTFHRRPPIAAKTVTVATSNVSELTHKFNLLNQPHSSPKHSKLAKTIEGLQTARRSLSNSSTPSSTLSSSPNIKIVVRQKRGSKKRNHRKRCSSMDSIDKLIITDKESTKIQVIRSKSDGIKAPKYQSSKKKLKYHDSNEHQNGSDSVDGLAAKSVINEPEKDIKATGNNVKSVIKKFECEINAQTINTNTIKKQPDPTKSIVPLKEKPKVPEKKSSIVLTKNIVVKDGIPKIKTIRPISNSNETPRKTQAANPDSTLVPKKKELIYDRKKYKTNYIHTEKLPLKVVEIIPEDIENTSSLVKDQIITNISNETSINITRVSVITESKAQDVEPPIIPNESFLWRRKSSTQIYAESDLSSSADISSCSLITITTNENSISCDEAAEEQSQTIEVKESQMNVNACEKNMDFESDLVEAYNKEILVGYTPKPQKEPVIEDDYEVLEPRESENIVVIPVKQVDMTSKMNCPLPEIPKQTSTESSESDDKENIYQCLLEMRSHPEGDESSLHNYELCENELEERTRGDGDSDDGYEYCKSPIKPYCLTSSSGIQIAEDYKPYNKDNNKNYAISKSVSGTSTVSYEKIGCDRIYEKIPPRPPKSKDSSPTYSDRHSFISDYIESENIYDTIKHGDGSLSHCYESIPNSPSMVKLRNNLKKQLASAVQKRLSFDTVSNISQSTLSSEQKTNSIYGQRSVISFNGQEVAFQVPCSETSVSDRSDRSDDWVDVSDEEKNEQKIVIVRERSRGRKSPISWSQKVRHQWLNSPKKSDSKECDSSDSSGHLYESLEPAPSQPPRAPVVPIEEDFDSFDSDSDPDDNDKTLTYAQAPPLPASKLPTPPSGGQYTLTKIASAAQRTMKSIKRNLTKRYSVAMDGKSFTKSSQNGTYEAPTKTKKTPIYANYEKPEIQNVYSNISFNDTKPVLNKAENPVKAEFQEELKYAVSEKRPNISDVPPPLPEKPPPERPMASACDMKKDSGTLSRKAYFSFKSRFRRATSLAVDINDVPSALKITNSTFYLTDSMDGDSGFSNCDGGQASSSETPPSRRGEGTLRYESTPCLALERPSVPPPPPPTDISAVNEELKRLLPTLARKDKSPRARTSWYAECGADATSNTASTSWYAEAGLYQAGNLSTSSGASSGSHPASPLPRSLFTHEPLYQFYNAAKVESIYRETGDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGPARTLWCEVPEVLNSAVLSSLAPAQKRLQEAKFELLTSEASYLNSLNVLESQFVAHPAFRDPHILPRDDWEILFSTILPVRKCSQLLMNELEKCWQENILLQGICDIVRHHAEEHFQVYVKYCENQTLMVKALQRLRERPAFATALKRVR

Uniprot

A0A3S2P8J0 A0A2A4J1L2 A0A2A4J008

EMBL

RSAL01000002 RVE54985.1 NWSH01004224 PCG65330.1 PCG65331.1

Proteomes

UP000283053 UP000218220

Pfam

PF00621 RhoGEF + More
PF14604 SH3_9

Interpro

IPR036028   SH3-like_dom_sf        + More
IPR000219   DH-domain
IPR011993   PH-like_dom_sf
IPR035899   DBL_dom_sf
IPR001452   SH3_domain

SUPFAM

SSF48065 SSF48065 + More
SSF50044 SSF50044

Gene 3D

1.20.900.10 2.30.29.30

CDD

cd00160 RhoGEF

ProteinModelPortal

A0A3S2P8J0 A0A2A4J1L2 A0A2A4J008

KEGG

101739343 K07525 neuronal guanine nucleotide exchange factor | (RefSeq) uncharacterized LOC101739343

GO

GO:0005089 GO:0035023 GO:0004784 GO:0005525 GO:0030131 GO:0005488 GO:0005622 GO:0007264 GO:0008026 GO:0016597

Length:

1510

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00038

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.00001

outside

1 - 1510

Pi

267.45685

Theta

176.895162

Tajima's D

1.45514

CLR

0.358457

CSRT

0.773361331933403

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics