Gene

KWMTBOMO05949

Pre Gene Modal

BGIBMGA002798

Annotation

PREDICTED:_superoxide_dismutase_[Cu-Zn]-like_[Amyelois_transitella]

Location

Bomo_Chr10(+):15288251-15296302      View in EpiBrowser

Full name

Superoxide dismutase [Cu-Zn]      

Location in the cell

Extracellular   Reliability : 2.549

CDS

ATGAACCTTCGCGGCTATCTACTATTTGGCCAGTTTCTGTGGCTGGTGGCCGTTTTAAACGGAAAAACCTTGCAAGGTATCCCTGGTTACGGCAGGAATTTGATTATCAAATCCCTGCCCGCCATTGAAGATTATCAAAGTCCCGTTTATGAAGTGTACATGGAGCCTTATTTATATGCACTGGGTCAAACAACATACCCTTTGAACGACAACAGAGCTGAAAAACAGATCGATTTGTCTATGGCACCACACCACGCACCCGGTTTGCAAGCCGTCGTCCATTTCATCGCTGATGAGGAGTCAGGCGTTTCCGGGGATCTGATCTTCACCCAGATCGTGCCTAACGGACCGGTGACAATCGAAGGGAACGTTACAGGCTTGGCCCCGGGACTACATGGCCTCCACGTCCACCAAACGGGCGACATAAAGGATAACTGCAAAGACATCGGACCCCATTTTTTTGCTTACTACGGTCGTCATGGTGGTCCCCGCGACCCGATTCGTCACGTTGGTGACCTCGGCAACATCAAGGCGGAGGAAGAAGCCACTCTTAATTTGAAGATAGTTGATCACCTCATTTCGTTGGCTGGACCTCGTTCTGTTGTGGGAAGGTCTATTGCCATAAGCAAGAGCGAGGATGACTATGGGAGGGCCAGTACTGAAGATAGCGCCCTCACCGGAACTTCAGGACCGGCGGTGGCTTGTGGAATAATAGGATACTTACATTAA

Protein

MNLRGYLLFGQFLWLVAVLNGKTLQGIPGYGRNLIIKSLPAIEDYQSPVYEVYMEPYLYALGQTTYPLNDNRAEKQIDLSMAPHHAPGLQAVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTEDSALTGTSGPAVACGIIGYLH

Description

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic Activity

2 H(+) + 2 superoxide = H2O2 + O2

Cofactor

Cu cation
Zn(2+)

Similarity

Belongs to the Cu-Zn superoxide dismutase family.

Feature

chain  Superoxide dismutase [Cu-Zn]

Uniprot

H9IZW3   A0A0L7LQD3   A0A2I6PNB4   A0A212F8Q6   A0A2H1VIW0   I4DK29   + More
A0A194Q3M4   A0A194QR24   A0A2A4JBP1   A0A1W4XTC5   D6X0S3   A0A0U2UW08   A0A385HW17   A0A1W4XHS9   A0A076G2A7   A0A1Y1MG08   A0A1B6MSG6   A0A075W394   A0A2R4SDS4   A0A0S2A4A1   E9J9R9   A0A151JLU4   A0A0C9RVD9   E2B222   A0A158NAZ2   F4WBA7   A0A3L8DNU6   A0A1B6G7R0   E2BYV3   A0A0A9Z714   A0A1D2NID4  

EC Number

1.15.1.1

Pubmed

19121390    26227816    29258441    22118469    22651552    26354079    + More
18362917    19820115    25042129    28004739    21282665    20798317    21347285    21719571    30249741    25401762    27289101   

EMBL

BABH01019012    JTDY01000324    KOB77698.1    MG566057    AUM62139.1    AGBW02009690    + More
OWR50110.1    ODYU01002618    SOQ40352.1    AK401647    BAM18269.1    KQ459472    KPJ00132.1    KQ461175    KPJ07958.1    NWSH01002062    PCG69269.1    KQ971372    EFA10684.1    KT270585    ALR99799.1    MG601766    AXY54994.1    KF527567    AII26026.1    GEZM01036299    JAV82816.1    GEBQ01001097    JAT38880.1    KJ754013    AIG92783.1    MF101776    AVZ46913.1    KT002137    KT002142    ALN12439.1    ALN12444.1    GL769399    EFZ10460.1    KQ978966    KYN26892.1    GBYB01011661    JAG81428.1    GL445031    EFN60278.1    ADTU01010586    ADTU01010587    GL888060    EGI68528.1    QOIP01000006    RLU22061.1    GECZ01011299    GECZ01001455    JAS58470.1    JAS68314.1    GL451531    EFN79125.1    GBHO01003923    JAG39681.1    LJIJ01000031    ODN05017.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053268    UP000053240    UP000218220    + More
UP000192223    UP000007266    UP000078492    UP000000311    UP000005205    UP000007755    UP000279307    UP000008237    UP000094527   

PRIDE

H9IZW3   

Pfam

PF00080   Sod_Cu

Interpro

IPR024134   SOD_Cu/Zn_/chaperone        + More
IPR036423   SOD-like_Cu/Zn_dom_sf       
IPR001424   SOD_Cu_Zn_dom       
IPR018152   SOD_Cu/Zn_BS       

SUPFAM

SSF49329   SSF49329       

Gene 3D

2.60.40.200    

CDD

cd00305  Cu-Zn_Superoxide_Dismutase

ProteinModelPortal

H9IZW3   A0A0L7LQD3   A0A2I6PNB4   A0A212F8Q6   A0A2H1VIW0   I4DK29   + More
A0A194Q3M4   A0A194QR24   A0A2A4JBP1   A0A1W4XTC5   D6X0S3   A0A0U2UW08   A0A385HW17   A0A1W4XHS9   A0A076G2A7   A0A1Y1MG08   A0A1B6MSG6   A0A075W394   A0A2R4SDS4   A0A0S2A4A1   E9J9R9   A0A151JLU4   A0A0C9RVD9   E2B222   A0A158NAZ2   F4WBA7   A0A3L8DNU6   A0A1B6G7R0   E2BYV3   A0A0A9Z714   A0A1D2NID4  

PDB

3GTV     E-value=1.1104e-30,     Score=330

KEGG

101741277    K04565 superoxide dismutase, Cu-Zn family [EC:1.15.1.1] | (RefSeq) superoxide dismutase [Cu-Zn]-like

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)
04213    Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0006801   GO:0046872   GO:0004784   GO:0005507   GO:0019430   GO:0005634   GO:0005829   GO:0005525   GO:0030131   GO:0005488   GO:0005622   GO:0007264   GO:0008026   GO:0016597  

PANTHER

PTHR10003  

SignalP

Position:   1 - 21,         Likelihood:  0.887172

 

 

Length:

242

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.00660000000001

Exp number, first 60 AAs:

4.96776

Total prob of N-in:

0.22652

outside

1  -  242

 

 

Pi

261.052934

Theta

161.409619

Tajima's D

1.724102

CLR

0.257825

CSRT

0.830458477076146

Interpretation

Uncertain