Gene

KWMTBOMO05946

Annotation

PREDICTED:_23_kDa_integral_membrane_protein-like_[Bombyx_mori]

Location

Bomo_Chr10(-):15245502-15247080      View in EpiBrowser

Full name

Tetraspanin       + More
Tetraspanin-9      

Location in the cell

PlasmaMembrane   Reliability : 4.143

CDS

ATGAAACCCCGCTCTATACGCTGCATGAAGTTTTTTCTGACGCTCTTCAATGTGATTTGCATCGTCTTTGGTTTGATTTTGATGGCCATTTGCGTCATTAATATGCGCGACAAGAAGAATCGTCCGGATCAACAATCAGCTTTGTCAAGAGGTGTGCTGTCATTCCTCTTAACTCTTGGTTTCTGTTTGGCTGTAACTGGTGTTTTGGGCTGCGTCGGTGCTTTGAGAGAGCACGTTAAAGTACTTTATGTGCATGCTTGCTTCTTCATATTCCTGGTATCAGTCGAGCTGGTGGTAGGAGTCGGAGGGGCGGTCCTTAGCGCTTGGGTCGGCGGGAGCAACGAACTACGAATGCAATTTTACAAAAACGCTACCGTGGAAGACGAAGTATCGAAACATCACAATTTCTGGGACAGCTTACAGTCCGAGAATAAATGTTGTGGCGTGGACGGTCCCCAAGATTACGCCATACTGCATCGAGACATTCCGGCCTCATGCTGCGCCCGAGCTTATCCTCTCCGCGAGGGTGGAGCCCGTCGACATTTGTACGCTACCTGTATTTCGGAAAGGACATACTACAAGGCAGGTTGCGAAGAGGCTCTCCGACAGAAGAAAACCATGAAAGGAAACATTTTTATTAGTACAGGAATCGTTTTCGCTTTATTGGAGGTACGTGTAAAAATATTTTTAGTTACAAAATTACATGATCATTTTTATAATATAGACTAG

Protein

MKPRSIRCMKFFLTLFNVICIVFGLILMAICVINMRDKKNRPDQQSALSRGVLSFLLTLGFCLAVTGVLGCVGALREHVKVLYVHACFFIFLVSVELVVGVGGAVLSAWVGGSNELRMQFYKNATVEDEVSKHHNFWDSLQSENKCCGVDGPQDYAILHRDIPASCCARAYPLREGGARRHLYATCISERTYYKAGCEEALRQKKTMKGNIFISTGIVFALLEVRVKIFLVTKLHDHFYNID

Similarity

Belongs to the tetraspanin (TM4SF) family.

Keywords

Complete proteome   Glycoprotein   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  Tetraspanin-9

Uniprot

A0A2A4JFK4   A0A2H1W865   A0A212F783   A0A0L7KZ26   A0A194QRJ2   A0A194Q3L9   + More
A0A212F781   A0A194Q457   A0A3S2P1W8   A0A3S2LJ58   A0A2A4JFM4   A0A212F793   A0A194Q9P1   A0A2H8TQA1   A0A2H1W9Q9   A0A087TFG6   A0A076KUR5   K7J9H7   A0A0B5H7U5   A0A182FCW0   A0A0K8WBF2   N6UM92   A0A0A1WG71   A0A084W472   A0A034WD08   A0A2S2QQ20   A0A182RV02   A0A1B0D9D5   B4KR28   B4MQJ7   Q7Q9H6   A0A182XET4   A0A182HNW1   T1GNT4   A0A232EUB7   A0A0C9QE23   Q28Y97   A0A1B0CUN9   A0A182MBF2   A0A182WME0   B4LQ51   H7CHJ1   B4J8Z2   A0A026W8X0   A0A182P8U7   A0A0J7L311   W8BXV6   B4GCW3   A0A1D1UQ65   Q176T5   A0A0M5J749   A0A026W8U6   A0A3B5KLI5   A0A0V0JAW3   A0A158NAZ0   A0A3B3RMI6   A0A182YC21   A0A2U9BBA8   A0A0N0BFU5   F6TTN6   N6UQ61   A0A3B0JKU2   A0A0N0BD54   A0A1Z5L5C1   H2UYH5   A0A3Q1FFI0   D6X0S1   A0A3B3RJZ9   A0A0C9RAA1   W5JSN2   A0A336MEI8   E2BYV0   A0A3B3ULN6   H2YU34   A0A1I8QDE5   K7ISS9   A0A1W4XT51   A0A1I8MII5   A0A151HY78   D6X0S0   A0A3P8YU62   Q6GMK6   A0A3B3RM52   A0A3Q2ZL31   B3MFB3   A1Z8K7   A0A0L7KTN2   E2B224  

Pubmed

22118469    26227816    26354079    20075255    23537049    25830018    + More
24438588    25348373    17994087    12364791    28648823    15632085    24508170    30249741    24495485    27649274    17510324    21551351    21347285    29240929    25244985    12481130    15114417    28528879    18362917    19820115    20920257    23761445    20798317    25315136    25069045    23594743    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

NWSH01001766    PCG70203.1    ODYU01006924    SOQ49203.1    AGBW02009903    OWR49602.1    + More
JTDY01004293    KOB68321.1    KQ461175    KPJ07954.1    KQ459472    KPJ00127.1    OWR49601.1    KPJ00129.1    RSAL01000002    RVE54994.1    RVE54996.1    PCG70202.1    OWR49603.1    KPJ00126.1    GFXV01004355    MBW16160.1    SOQ49204.1    KK114976    KFM63855.1    KF433416    AII97740.1    KJ535125    AJF38198.1    GDHF01004139    JAI48175.1    APGK01026523    APGK01026524    KB740635    KB631992    ENN79832.1    ERL87761.1    GBXI01016899    JAC97392.1    ATLV01020284    KE525297    KFB45016.1    GAKP01006771    GAKP01006770    JAC52182.1    GGMS01010625    MBY79828.1    AJVK01012925    CH933808    EDW10384.2    CH963849    EDW74386.1    AAAB01008900    EAA09395.4    APCN01002794    CAQQ02119555    CAQQ02119556    CAQQ02119557    CAQQ02119558    CAQQ02119559    CAQQ02119560    NNAY01002144    OXU21942.1    GBYB01012658    JAG82425.1    CM000071    EAL26068.1    AJWK01029481    AXCM01011569    CH940648    EDW61336.1    AB701637    BAL70289.1    CH916367    EDW01341.1    KK107353    QOIP01000012    EZA52081.1    RLU15762.1    LBMM01001031    KMQ97046.1    GAMC01002393    JAC04163.1    CH479181    EDW32526.1    BDGG01000001    GAU88503.1    CH477383    EAT42156.1    CP012524    ALC41286.1    KK107324    QOIP01000006    EZA52517.1    RLU21332.1    GEEE01000265    JAP62960.1    ADTU01010579    ADTU01010580    ADTU01010581    CP026247    AWP01225.1    KQ435794    KOX73598.1    EAAA01000909    APGK01008978    APGK01008979    APGK01008980    APGK01008981    KB737825    ENN82906.1    OUUW01000001    SPP73856.1    KQ435878    KOX69968.1    GFJQ02004357    JAW02613.1    KQ971372    EFA09563.1    GBYB01003736    JAG73503.1    ADMH02000552    ETN65900.1    UFQS01000997    UFQT01000997    SSX08337.1    SSX28360.1    GL451531    EFN79122.1    EFN79123.1    AAZX01003292    KQ976724    KYM76647.1    EFA09564.2    BX901962    CT573114    BC074038    BC142792    CH902619    EDV35587.1    AE013599    AAM68735.1    JTDY01005790    KOB66627.1    GL445031    EFN60280.1   

Proteomes

UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    UP000283053    + More
UP000054359    UP000002358    UP000069272    UP000019118    UP000030742    UP000030765    UP000075900    UP000092462    UP000009192    UP000007798    UP000007062    UP000076407    UP000075840    UP000015102    UP000215335    UP000001819    UP000092461    UP000075883    UP000075920    UP000008792    UP000001070    UP000053097    UP000279307    UP000075885    UP000036403    UP000008744    UP000186922    UP000008820    UP000092553    UP000005226    UP000005205    UP000261540    UP000076408    UP000246464    UP000053105    UP000008144    UP000268350    UP000257200    UP000007266    UP000000673    UP000008237    UP000261500    UP000007875    UP000095300    UP000192223    UP000095301    UP000078540    UP000265140    UP000000437    UP000264820    UP000007801    UP000000803    UP000000311   

PRIDE

A1Z8K7   

Pfam

PF00335   Tetraspanin        + More
PF00067   p450
PF05649   Peptidase_M13_N
PF01431   Peptidase_M13

Interpro

IPR018499   Tetraspanin/Peripherin        + More
IPR000301   Tetraspanin       
IPR008952   Tetraspanin_EC2_sf       
IPR018503   Tetraspanin_CS       
IPR024079   MetalloPept_cat_dom_sf       
IPR008753   Peptidase_M13_N       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR042089   Peptidase_M13_dom_2       
IPR036396   Cyt_P450_sf       
IPR000718   Peptidase_M13       
IPR018497   Peptidase_M13_C       

SUPFAM

SSF48652   SSF48652        + More
SSF48264   SSF48264       

Gene 3D

1.10.1450.10     1.10.1380.10     1.10.630.10     3.40.390.10    

CDD

cd08662  M13

ProteinModelPortal

A0A2A4JFK4   A0A2H1W865   A0A212F783   A0A0L7KZ26   A0A194QRJ2   A0A194Q3L9   + More
A0A212F781   A0A194Q457   A0A3S2P1W8   A0A3S2LJ58   A0A2A4JFM4   A0A212F793   A0A194Q9P1   A0A2H8TQA1   A0A2H1W9Q9   A0A087TFG6   A0A076KUR5   K7J9H7   A0A0B5H7U5   A0A182FCW0   A0A0K8WBF2   N6UM92   A0A0A1WG71   A0A084W472   A0A034WD08   A0A2S2QQ20   A0A182RV02   A0A1B0D9D5   B4KR28   B4MQJ7   Q7Q9H6   A0A182XET4   A0A182HNW1   T1GNT4   A0A232EUB7   A0A0C9QE23   Q28Y97   A0A1B0CUN9   A0A182MBF2   A0A182WME0   B4LQ51   H7CHJ1   B4J8Z2   A0A026W8X0   A0A182P8U7   A0A0J7L311   W8BXV6   B4GCW3   A0A1D1UQ65   Q176T5   A0A0M5J749   A0A026W8U6   A0A3B5KLI5   A0A0V0JAW3   A0A158NAZ0   A0A3B3RMI6   A0A182YC21   A0A2U9BBA8   A0A0N0BFU5   F6TTN6   N6UQ61   A0A3B0JKU2   A0A0N0BD54   A0A1Z5L5C1   H2UYH5   A0A3Q1FFI0   D6X0S1   A0A3B3RJZ9   A0A0C9RAA1   W5JSN2   A0A336MEI8   E2BYV0   A0A3B3ULN6   H2YU34   A0A1I8QDE5   K7ISS9   A0A1W4XT51   A0A1I8MII5   A0A151HY78   D6X0S0   A0A3P8YU62   Q6GMK6   A0A3B3RM52   A0A3Q2ZL31   B3MFB3   A1Z8K7   A0A0L7KTN2   E2B224  

KEGG

105841985    K17296 tetraspanin-14 | (RefSeq) 23 kDa integral membrane protein-like

GO

GO:0016021   GO:0005887   GO:0020037   GO:0004222   GO:0016705   GO:0005506   GO:0015116   GO:0005525   GO:0030131   GO:0005488   GO:0005622   GO:0007264   GO:0008026   GO:0016597  

Subcellular location

Membrane  

Length:

242

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

86.17253

Exp number, first 60 AAs:

31.03724

Total prob of N-in:

0.37452

POSSIBLE N-term signal

sequence

inside

1  -  10

TMhelix

11  -  33

outside

34  -  52

TMhelix

53  -  75

inside

76  -  87

TMhelix

88  -  110

outside

111  -  242

 

 

Pi

131.854376

Theta

136.021641

Tajima's D

0.3985

CLR

0.883989

CSRT

0.490525473726314

Interpretation

Uncertain