Gene

KWMTBOMO05944

Pre Gene Modal

BGIBMGA002909

Annotation

PREDICTED:_uncharacterized_protein_LOC101740169_[Bombyx_mori]

Location

Bomo_Chr10(-):15192033-15194820      View in EpiBrowser

Full name

Tetraspanin       + More
Tetraspanin-18      

Location in the cell

Extracellular   Reliability : 2.676

CDS

ATGAGTACCAGAGACGCGGAAGGACTATCTAAGTCCCTGGCGGACAGCTTCCTACTGGCCCAGGAAGATAACTCGAGGCACGTGAAGCTCTGGGCTGCCACACAGCATGATTTAGCCTGCTGCGGTGTCTACAGTCCAGAAGATTACAAAAACCCAAAGATTCCTAAATACTTCCCCCCCGATGTCCCTATCTCTTGCTGTCCCACTTACGACCCGCAGCGATCTCCCCTGCTCCAGGAGAAAGAGAGAGAGCTCTGCAAAGCCCAGAGGGTCTACCACCCGGCCGGATGCACGGACTTGGTCATCAAGGCCTTCAGAGATACGGCCTATCTGGTGCTCGCTGTTACCATCAATCTGATTATGCTTGAGATTTTGTGTGCGATCTGTGGCTCGGTAATTGTGGTAAAAAACAGAAAAATCGAAAAGTGCGAAGAAGAAGCGGCACAGACGAAATAA

Protein

MSTRDAEGLSKSLADSFLLAQEDNSRHVKLWAATQHDLACCGVYSPEDYKNPKIPKYFPPDVPISCCPTYDPQRSPLLQEKERELCKAQRVYHPAGCTDLVIKAFRDTAYLVLAVTINLIMLEILCAICGSVIVVKNRKIEKCEEEAAQTK

Similarity

Belongs to the tetraspanin (TM4SF) family.

Keywords

Complete proteome   Glycoprotein   Membrane   Reference proteome   Transmembrane   Transmembrane helix   Polymorphism  

Feature

chain  Tetraspanin-18
sequence variant  In dbSNP:rs2291334.

Uniprot

H9J074   A0A2H1W3J2   A0A2A4JE11   A0A220K8K8   A0A2H1W528   A0A194Q545   + More
A0A3S2NS96   A0A3S2NS58   A0A212EZM1   A0A194QR30   A0A212F1Q0   H9IZW2   V4C6Z7   A0A194Q3L9   R0JLJ5   A0A091KHZ8   A0A1S3G9R0   F1SHI4   A0A0P6J4H3   U3IFH5   L5KXD6   A0A094LAB6   A0A384A1V2   W5NUT1   S7N394   Q58CY8   L8I1P8   A0A2Y9TJS8   G5AS48   A0A091JTN0   L5LC68   G1NUN5   A0A340X9K2   A0A341BRN0   A0A2Y9PRN2   A0A1U7TSZ3   A0A087QYI9   A0A2Y9JR02   A0A091PCW3   A0A093EWW0   A0A093FFT9   A0A194Q457   A0A093LIF2   A0A2K5DDF9   A0A093C3H1   A0A2K5QJQ9   A0A2K6FQ41   A0A2K6UNR9   A0A2K6L8I8   A0A2K5WC09   G3QVM4   A0A2I3FUL7   A0A2K5YQU1   A0A0D9QZV1   A0A2R9AHT9   A0A2K5JPL1   A0A2J8WFJ3   H2Q3G6   F6YG23   Q96SJ8   A0A093C3T4   A0A091W8Z1   H2NDM2   A0A093PA70   A0A091RTT8   A0A1A6GRP1   A0A2K6CNW3   A0A2R9AMI8   A0A096MQ94   A0A2K6NB07   A0A091LYI2   A0A2A4JFM4   A0A093IR98   F6Y3A1   A0A094NIR6   A0A091VS31   A0A2A4JFK4   A0A3S2LJ58   A0A091P5K8   A0A091F2N4   A0A091CR91   A0A093IK23   A0A0A0A1N7   A0A218V9L2   G1PZJ1   A0A226MYU6   A0A091TTC8   A0A2H1W865   A0A2U3YU90   A0A3M0JNK6   A0A091RYM6   A0A250XX07  

Pubmed

19121390    28630352    26354079    22118469    23254933    30723633    + More
23749191    23258410    20809919    16305752    22751099    21993625    21993624    22398555    22722832    16136131    17431167    25319552    14702039    12975309    25362486    18464734    28087693   

EMBL

BABH01019019    ODYU01006070    SOQ47603.1    NWSH01001766    PCG70201.1    MF319709    + More
ASJ26423.1    ODYU01006071    SOQ47604.1    KQ459472    KPJ00125.1    RSAL01000002    RVE55050.1    RVE54997.1    AGBW02011251    OWR46933.1    KQ461175    KPJ07952.1    AGBW02010830    OWR47668.1    BABH01019017    KB201305    ESO97434.1    KPJ00127.1    KB743578    EOA97946.1    KK742182    KFP39113.1    AEMK02000009    DQIR01238053    HDB93530.1    GEBF01006239    JAN97393.1    ADON01102566    ADON01102567    ADON01102568    KB030484    ELK16062.1    KL354175    KFZ60999.1    AMGL01033280    AMGL01033281    KE163014    EPQ10495.1    BT021809    JH882424    ELR49489.1    JH166724    EHA99858.1    KK502397    KFP23170.1    KB113178    ELK23797.1    AAPE02035076    KL226001    KFM06293.1    KK656829    KFQ05475.1    KK611753    KFV46511.1    KK388843    KFV53136.1    KPJ00129.1    KK573116    KFW08756.1    KL452611    KFV06822.1    AQIA01020334    CABD030078528    CABD030078529    ADFV01113821    ADFV01113822    ADFV01113823    ADFV01113824    AQIB01081563    AQIB01081564    AQIB01081565    AQIB01081566    AQIB01081567    AQIB01081568    AQIB01081569    AQIB01081570    AQIB01081571    AQIB01081572    AJFE02024479    NDHI03003391    PNJ68538.1    AACZ04016403    GABD01007241    NBAG03000291    JAA25859.1    PNI46764.1    JSUE03012344    JSUE03012345    JSUE03012346    JSUE03012347    JSUE03012348    JV635503    AFJ70843.1    AK027715    AK075547    AY358087    KL234132    KFV07724.1    KK734868    KFR11313.1    ABGA01131208    ABGA01131209    ABGA01131210    ABGA01131211    ABGA01131212    ABGA01131213    ABGA01131214    ABGA01131215    ABGA01131216    ABGA01131217    KL225333    KFW71115.1    KK932210    KFQ45564.1    LZPO01075899    OBS68559.1    AHZZ02006542    KK511965    KFP63437.1    PCG70202.1    KL216345    KFV69226.1    KL276250    KFZ66371.1    KL411355    KFR06004.1    PCG70203.1    RVE54996.1    KK668005    KFQ02606.1    KK719449    KFO63526.1    KN124869    KFO19885.1    KK590817    KFV99976.1    KL870451    KGL88469.1    MUZQ01000024    OWK62639.1    MCFN01000347    OXB60189.1    KK465600    KFQ81614.1    ODYU01006924    SOQ49203.1    QRBI01000144    RMC00300.1    KK808032    KFQ33492.1    GFFV01004049    JAV35896.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000007151    UP000053240    + More
UP000030746    UP000081671    UP000008227    UP000016666    UP000010552    UP000261681    UP000002356    UP000009136    UP000006813    UP000053119    UP000001074    UP000265300    UP000252040    UP000248483    UP000189704    UP000053286    UP000248482    UP000233020    UP000233040    UP000233160    UP000233220    UP000233180    UP000233100    UP000001519    UP000001073    UP000233140    UP000029965    UP000240080    UP000233080    UP000002277    UP000006718    UP000005640    UP000053605    UP000001595    UP000054081    UP000092124    UP000233120    UP000028761    UP000233200    UP000053875    UP000002279    UP000053283    UP000052976    UP000028990    UP000053858    UP000197619    UP000198323    UP000245341    UP000269221   

PRIDE

H9J074    H9IZW2    F1SHI4    Q58CY8    Q96SJ8   

Pfam

PF00335   Tetraspanin        + More
PF00014   Kunitz_BPTI

Interpro

IPR018499   Tetraspanin/Peripherin        + More
IPR008952   Tetraspanin_EC2_sf       
IPR002223   Kunitz_BPTI       
IPR036880   Kunitz_BPTI_sf       
IPR018503   Tetraspanin_CS       
IPR000301   Tetraspanin       

SUPFAM

SSF48652   SSF48652        + More
SSF57362   SSF57362       

Gene 3D

1.10.1450.10     4.10.410.10    

ProteinModelPortal

H9J074   A0A2H1W3J2   A0A2A4JE11   A0A220K8K8   A0A2H1W528   A0A194Q545   + More
A0A3S2NS96   A0A3S2NS58   A0A212EZM1   A0A194QR30   A0A212F1Q0   H9IZW2   V4C6Z7   A0A194Q3L9   R0JLJ5   A0A091KHZ8   A0A1S3G9R0   F1SHI4   A0A0P6J4H3   U3IFH5   L5KXD6   A0A094LAB6   A0A384A1V2   W5NUT1   S7N394   Q58CY8   L8I1P8   A0A2Y9TJS8   G5AS48   A0A091JTN0   L5LC68   G1NUN5   A0A340X9K2   A0A341BRN0   A0A2Y9PRN2   A0A1U7TSZ3   A0A087QYI9   A0A2Y9JR02   A0A091PCW3   A0A093EWW0   A0A093FFT9   A0A194Q457   A0A093LIF2   A0A2K5DDF9   A0A093C3H1   A0A2K5QJQ9   A0A2K6FQ41   A0A2K6UNR9   A0A2K6L8I8   A0A2K5WC09   G3QVM4   A0A2I3FUL7   A0A2K5YQU1   A0A0D9QZV1   A0A2R9AHT9   A0A2K5JPL1   A0A2J8WFJ3   H2Q3G6   F6YG23   Q96SJ8   A0A093C3T4   A0A091W8Z1   H2NDM2   A0A093PA70   A0A091RTT8   A0A1A6GRP1   A0A2K6CNW3   A0A2R9AMI8   A0A096MQ94   A0A2K6NB07   A0A091LYI2   A0A2A4JFM4   A0A093IR98   F6Y3A1   A0A094NIR6   A0A091VS31   A0A2A4JFK4   A0A3S2LJ58   A0A091P5K8   A0A091F2N4   A0A091CR91   A0A093IK23   A0A0A0A1N7   A0A218V9L2   G1PZJ1   A0A226MYU6   A0A091TTC8   A0A2H1W865   A0A2U3YU90   A0A3M0JNK6   A0A091RYM6   A0A250XX07  

KEGG

101740169    no KO assigned | (RefSeq) uncharacterized LOC101740169

GO

GO:0016021   GO:0004867   GO:0005887   GO:0015116   GO:0005525   GO:0030131   GO:0005488   GO:0005622   GO:0007264   GO:0008026   GO:0016597  

Subcellular location

Membrane  

Length:

151

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.0408

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.09426

outside

1  -  111

TMhelix

112  -  134

inside

135  -  151

 

 

Pi

183.680542

Theta

146.320304

Tajima's D

1.822819

CLR

0.51971

CSRT

0.848607569621519

Interpretation

Uncertain