SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05941
Pre Gene Modal
BGIBMGA002910
Annotation
putative_sulfate/bicarbonate/oxalate_exchanger_sat-1_[Operophtera_brumata]
Location in the cell
PlasmaMembrane   Reliability : 4.956
 

Sequence

CDS
ATGACAGTTCTTCCGAATATCGATCCGAGTCCCTGTCGCAAAAAAATCAAGAAGACTCTAAGAAAAACGTGTTCAGTGAAAACCTTGAAGAGACGTCTACCGATACTCAGCTGGCTACCGAAGTACAAACCTGGATACTTCCCACAAGACTTCATAGCTGGCATAACCGTGGGATTGACAGCCATACCGCAAGGCATAGCGTATGCGGTGGTGGCAGGACTGCCTCCAGAACACGGACTGTACGCATCTTTGACTTCAGGTGTCATTTACGTTTTCTTTGGAAGCTGTTATAATGTGACCGTTGGACCAACAGCTATCTTGGCAGCGATGACGGCAAAATATGTTTCGAACTATTCAGCTGATTTTGCCATTTTAGTTGCTTTCATTTCTGGATTAGTAATATTAGGCATGGGTATACTGCAGCTCGGTTTTTTGGTTGAATTTATTTCGATGCCCGTTATAAGCGGCTTCACGACAGCTGCAGCATTACAGATCGCTGCGTCGCAATTAAAATCGTTCGTCGGTCTAAGCGGACCGTCAGGAAATTATTTCGCAGAGTCAATAGAAAATTTAATCGTTAATTTCAAGACAATGAAACTATATGAACCGATCCTAGGACTAGCTACAATCATTATGCTGATGCTACTGAAAAAACTCGGTGAAGGTTGCAAGAGAACTGATGGTTTCATAAAACAGGTACGATGGTTCATTTCGCTCTCCAGAAACGCTGTGGTTATAGTCGTAGGAATGACTGTAGCATTCATTTTGAAAATCACGCTTGAGCATGAGCCGTTGATATTAATTGGTGACATTGGAGGTGGACTGCCAGAGTTCAGCTGGCCGCCATTTTCGACAGTCGTCGGCAACCAAACTTACAGCTTCGGAGACATGATGAACGTAATGGGCACCGGATTTGTGGTGCTACCTTTAGTTGCTATAATCGAATCTGTGGCGATAGCTAAAGCTTTCGCAGGTGGTGCTACAGTGGATGCCACACAAGAAATGATCGCCCTTGGCTTGTGCAATATAATCGGTTCTTTTGGTCAAAGTATGCCAATCACCGGATCATTTACCAGAACAGCCCTAAATCATATGTCCGGTGTTGTCACCCCACTGGGAGGAGTTACCAAAGTTATTTTATTAATCATTGCCCTCACCTCGTTGACTTCTACGTTTTATTACATTCCAAAAGCTTCATTATCTGGTTTGATCATATCGGCCATGTTTTCCATGATTGATTATAAAATAGTGCAAAAATTGTGGAGGAACAGCAAAAAAGAGTTGGCTATTCTTATTGTGACTGGAATGGTTTGTTTATTATACGGTTTGGAATACGGTATAATAGCTGGAATCGTTATTGAAGCAGCCTTGTTACTGCATAGAGTGTCAAGGCCTAAATTGAGTGCTAATTTCGTGAAATCCCAGAAAGGGGATCTACTTATTGTACCACTCACTGAAGACATATCGTACTGCGCCGCTGAGCATATTCGCAGAACAGTTATCAAGGAATCGCAGGAACTATCCGATACAGTAATCGTAATTGATGGTACGAACCTCAAAAACATGGATTTCACAGCTGCCTCGAATTTAGTGTTAGTTGTGAAGGAGTTAGACAAGAAATCGCTCAGAGTGTTGATGCTGAATTTCAATTTGATATTGAAGAATCTGTGTGTTGATATTGACAGGAGTATAGAAGAGAAATTTGTTTACGGCACAAACGTTCTGGTAATGCCGGAAGTATTTTTAAAAGCCGTGTAA
Protein
MTVLPNIDPSPCRKKIKKTLRKTCSVKTLKRRLPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLTSGVIYVFFGSCYNVTVGPTAILAAMTAKYVSNYSADFAILVAFISGLVILGMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGLSGPSGNYFAESIENLIVNFKTMKLYEPILGLATIIMLMLLKKLGEGCKRTDGFIKQVRWFISLSRNAVVIVVGMTVAFILKITLEHEPLILIGDIGGGLPEFSWPPFSTVVGNQTYSFGDMMNVMGTGFVVLPLVAIIESVAIAKAFAGGATVDATQEMIALGLCNIIGSFGQSMPITGSFTRTALNHMSGVVTPLGGVTKVILLIIALTSLTSTFYYIPKASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAALLLHRVSRPKLSANFVKSQKGDLLIVPLTEDISYCAAEHIRRTVIKESQELSDTVIVIDGTNLKNMDFTAASNLVLVVKELDKKSLRVLMLNFNLILKNLCVDIDRSIEEKFVYGTNVLVMPEVFLKAV

Summary

Similarity
Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
EMBL
BABH01019037    JTDY01007741    KOB64973.1    NWSH01007697    PCG62852.1    ODYU01006956    + More
SOQ49277.1    KQ459472    KPJ00123.1    KQ461175    KPJ07949.1    JTDY01000476    KOB77005.1    AGBW02012324    OWR45211.1    GFTR01007336    JAW09090.1    GBGD01000935    JAC87954.1    NWSH01004247    PCG65307.1    ODYU01000543    SOQ35478.1    GECL01002483    JAP03641.1    KZ150001    PZC75311.1    CH477832    EAT35825.1    GFDF01009352    JAV04732.1    ADMH02000728    ETN65234.1    GFDL01008117    JAV26928.1    GFDF01009351    JAV04733.1    GDHC01003476    JAQ15153.1    GDKW01002824    JAI53771.1    GDHC01006325    JAQ12304.1    NNAY01003020    OXU20106.1    GEZM01058160    JAV71860.1    AAZX01001196    AAZX01010281    ACPB03014185    NNAY01002700    OXU20749.1    GEZM01058159    JAV71861.1    GL439905    EFN66636.1    GL434761    EFN74604.1    GECU01037002    JAS70704.1    GECZ01025058    GECZ01004421    JAS44711.1    JAS65348.1    GECZ01021069    GECZ01006625    JAS48700.1    JAS63144.1    GL451937    EFN78210.1    GGFK01010181    MBW43502.1    GECU01031114    GECU01026481    JAS76592.1    JAS81225.1    DS231819    EDS42809.1    KQ976750    KYN08644.1    JXUM01047217    JXUM01047218    KQ561510    KXJ78346.1    JXUM01049949    JXUM01049950    UFQS01000397    UFQT01000397    SSX03619.1    SSX23984.1    ETN65233.1    KQ459169    KPJ03413.1    GAPW01000485    JAC13113.1    ATLV01021319    KE525316    KFB46321.1    KQ976514    KYM82271.1    KK854946    PTY19868.1    AAAB01008952    GL888147    EGI66552.1    GEBQ01002282    JAT37695.1    GEBQ01010697    JAT29280.1    KFB46322.1    GFDL01008179    JAV26866.1    UFQS01004118    UFQT01004118    SSX16183.1    SSX35509.1    ADTU01014484    ADTU01014485    ADTU01014486    ADTU01014487    ADTU01014488    ADTU01014489    NEVH01000254    PNF43806.1    GEDC01018755    JAS18543.1    GEDC01005490    JAS31808.1    CH933808    EDW09310.1    GEDC01002456    JAS34842.1    GEDC01019009    JAS18289.1    CH916367    EDW02497.1    KQ971362    KYB25749.1    AXCN02002212    GEDC01010889    JAS26409.1    GEDC01018210    JAS19088.1    GEDC01018041    JAS19257.1    GEDC01016037    JAS21261.1    GL452471    EFN77150.1    KQ982877    KYQ49705.1    KQ978538    KYN30256.1    GEDC01022794    JAS14504.1    CH479183    EDW35447.1    APCN01005988    CH940648    EDW61791.2    UFQS01001323    UFQT01001323    SSX10345.1    SSX30033.1    LJIG01002933    KRT84007.1    PNF43808.1    UFQS01001780    UFQT01001780    SSX12330.1    SSX31781.1    JRES01000835    KNC27930.1    KQ434857    KZC08897.1    CM000071    EDY69428.1   
Pfam
PF00916   Sulfate_transp        + More
PF01740   STAS
PF17906   HTH_48
Interpro
IPR002645   STAS_dom        + More
IPR036513   STAS_dom_sf       
IPR001902   SLC26A/SulP_fam       
IPR011547   SLC26A/SulP_dom       
IPR018045   S04_transporter_CS       
IPR041426   Mos1_HTH       
SUPFAM
SSF52091   SSF52091       
Gene 3D
PDB
5DA0     E-value=5.65105e-12,     Score=173

Ontologies

Topology

Subcellular location
Membrane  
Length:
585
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
214.27096
Exp number, first 60 AAs:
9.51536
Total prob of N-in:
0.45418
inside
1  -  50
TMhelix
51  -  73
outside
74  -  87
TMhelix
88  -  110
inside
111  -  121
TMhelix
122  -  144
outside
145  -  199
TMhelix
200  -  217
inside
218  -  237
TMhelix
238  -  260
outside
261  -  296
TMhelix
297  -  319
inside
320  -  365
TMhelix
366  -  388
outside
389  -  397
TMhelix
398  -  417
inside
418  -  429
TMhelix
430  -  452
outside
453  -  585
 
 

Population Genetic Test Statistics

Pi
151.152629
Theta
178.765354
Tajima's D
-0.485972
CLR
11.972163
CSRT
0.246537673116344
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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