SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05933
Pre Gene Modal
BGIBMGA002912
Annotation
PREDICTED:_uncharacterized_protein_LOC101740438_isoform_X5_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.583
 

Sequence

CDS
ATGGAGGAGACAGTCAGATCGCTGCTACAATACAAGAGCCGCGTGGAGACTTTGAAGCAGGAGAAGGCGTCTTTATCATCAGCCCTGGAGGCGTCAGCGGCGCACTACCAGAGTCAGCTGGCTACGTTGAGCACAGAGAACGAGCGTCTCCGTGGCCAGCTATCTGCGCTGTCGGCAGGACTCGAAGCTAATGAACACGAAAGAAAGCTCGATGACGTGGCACAGCAGGTCGTTAGGGCACTACTCTCACAGAAGAGTATACGTGAGGAGTTAGGATGCGCCAGGGCCCGCGTCAGAGAGCTTGAAGCTCAGAACAGAGCTTTAAGTGCGTTGCTGGTGAGGCAACTTCGCCCTGTGCCGCGTCCGTCGCCCGCCACTCCGCTTACACCCATTACACCGGCACCGAGAGACTTGCAAGTACACCTAGTGGACGTCGGATCGTGTGGGTCGTTGGTCTCATTCAGAGACTCGCCACCCCCCGCTCCTCCGGTGCAGCACCCCCACCCCCTCAGTCACGACGACAAGCGACGCCATCAGATCCTGGCCGATATATGGACTGAACTTAAGGGTCTGGAAGTAACCCCAGCAAATCTGGCGCGTGCGCTGTCAGCCGTGGATCCCACACTTTGGGCTCCACCGGCCAGACCTGCTACTCTCAGCCTCAATGTACCTCCTCCTCGTTCTGACTCTGCAAAAGATGTCAAAGAAGATAAAGTGACTGAGGAGGAGAGCGGTGAGGCGTGTGAAGCGGGAGCTGAATCTCCAGAAAGTGGTGCCAAGGACGAAGGCTACTCCACAATGTCTAGTGACGTTCAGGCTGATGCTTCAAGGCAAAGTGACCACGCTGCCGACAGGGCTTTACCGGACTTAAATGAGGCTTCAGATGAAACAGACAATCAAACTATTGTCTCAATAAACCCTAGAGAATCTCGAAGGCATGCTAGGTTATTGGCTGAGGCGGACTACATTTACTTCCCTATAGGTGTAGCGTTTGCTGGAGTCCGCGGCAGTTATCCTCCTTCGAGACCCGTACTGCCTTTTCAGCACGTCGTTCGAAGCTTTTCTGATTCACATCTATGTTTAAAGTTGATAGCAGGAACGACGTGTGCCAGCAGTTGTATGGACACTCCGACACCAAGTTCCGGAGTACTGTTATTGGATTTAAAGCCGGCACCGGAAAGACCATTACGACGAGCAGCGATCGCGTCTACTACGAGTTCCGAAAGGGTTTCATGGGGAAGCACGGTAGATGAAAGACCTGATGGTTCCCAATATGAAGCCGATTACGTCCAGCACTGGCTAGAACTCGACGACGCAAGATCAGCTTTGCAACAGAGACACAGAGATTTAGCAGATTTAGAATACGATAGAGCTGAACTTGAAGACTGGAGTTTATCGCTTTCGTGTGAAGATCTCAGAGATAGGCAGTCGCCATTCGCAGAAATCACTACACCAGGCCAAATATCGCTGTCCACTTTGCCGAGCATAAGAGAAGATGATGCCTTAGAATTAGAAGAAGATGTCGGAGATTGTCTGTGGAATGATTGTGGTTTTGCAACTGTCGAAATTGATGAATGTAAAGGAGACGATCCGGAAAATTCCGAGAAGCGATGGGAATGTACCGGAACTCATTCCCCTGGTGGATCGTGGTCGAGTGCTTCGGATGCTCAAGACAAGCGATCTAGCACGGCATTGAGTGAAGATGGCGATTGCACAAATGTCGGTTTAGATTTTACTAGAGACTTTTATCGTCTCGTCAAATATGAAAGCACAAAGAGCTTAGCATCAAATTCGTCCAGAGGCATTGCGTCACACGACGCCAATAGTCATTTAAGGATACATGACGTCCAATCTATGGCCATACAAGACAGGGAACATGCGCTTCAAAATGTGCTCCACTTTATAGCTGAACAACAGAAATATTGTCGAGATCGTGAAGAATCAGATTCCATGTCTTCAAGGCCGGTATCAGAAATCAGAGAATTACCTCCTCCGTACGCTGCGGCCGACTTCGATGACGATTCAGTTGGCCCACGTAGCGAAGTATCCGAAGATAGAAGGCCAGATTCTTTTGGTAGTTTCTCAGAGAACGATTCATGTGAGGCAATTTCCGATCGGCCTAGAGTATCATTTAGTGAAACTGTATCAGAACCAAGATTCATTGCACGAGAGGATCCTTACGTGGAATCTGAAGCTTTTTATGAAGAGTTATCAAGGATAGATTCTAGCAACGAAATTGAGGATCTCACAAAAGTGCAACGGAAAAACGAAATCAATAAAAACGTTGCTGTAAGTGATAACGATGATAAAGAAGATAATTCTGTGCAATTTTTAAATAGTACGCCAAATGATACTGAAACTAGTCGAAGCGCTGAGTCTATTATAGCTTTAAAAGAAAACACAGTTAACATAATTCTGCCCATAATTGCATCTGAAATTGAAACCCCGAAGGTGACTTTTGCGTTTACCACAAGCGAAACTGACATAGCCATAGTAGATGAAGTAATTAGTGTTTGTAAAAGAAACACAGCGCTACTAACAGTTCCTGAAGAAGAAGAAGGCTCCTCGCCAGAAACGAGCTCACCACAAATGACTGAATCAAATACCACGAGCACTTCAACTGCTGAAACTGTGATAATAAGTAATAAGAATGATGTTAAAGAAATAAGACTTCGAGAACGGAGCCGCATTCCCACCCTTGCTGGTAAAAGGCCTCCGTCCTCGCCGAGTAAGGGAAAATCGAAGATCCCCGTAGCGGGAAAACTTAGACAAGCCAAATCAGTTCCCAATGCTGAGCCAATTATTGTTAAACAAGAGAATAAGTTGAGCTTCCACGAGGCTGCCACTTCTAAGGACGTCATCGAAGAACTTAATAGGATGATTAGACAAAGCGAAACTGGAACGCCTGGAAACGAACCTAAGAATGATGAAAAGAACGATAAAGGCAATTCGCATAAGGACAGCGAACTTTGGGCGCCTACAGGATGGGTGCACGTTGAAAAGGACATAGATTTTAGTGATCCTAAGGCCCGAGCTAATCTTCTAGACGTGATGTTAGCATCGAGCGATTCTTCTCCATCATCGTGTGGCTCCTCACCAGCCGAACCTCCTCCGCCCTACTCCAGGCTACATCGCCTGCACAGATCTAGGAGACAAAAAACCGCGGCGGCGCTGCGTGCCCGCGGGCTCGGCGTGGTGCGTCTGGGCCGAGGCGCGTCGCGGCGCCCTACCATCCTGGGACGGGAGTCGCTGTTCGTGCGCTACGCCGACCCGGAGCGCGCCGCGGTCGCGACCTTCGACTTCCTCGACGCGTTCTCCGCCTCCACCTCCCCCGAAGACACCCTCAACGCGCTACCGGACAAATGA
Protein
MEETVRSLLQYKSRVETLKQEKASLSSALEASAAHYQSQLATLSTENERLRGQLSALSAGLEANEHERKLDDVAQQVVRALLSQKSIREELGCARARVRELEAQNRALSALLVRQLRPVPRPSPATPLTPITPAPRDLQVHLVDVGSCGSLVSFRDSPPPAPPVQHPHPLSHDDKRRHQILADIWTELKGLEVTPANLARALSAVDPTLWAPPARPATLSLNVPPPRSDSAKDVKEDKVTEEESGEACEAGAESPESGAKDEGYSTMSSDVQADASRQSDHAADRALPDLNEASDETDNQTIVSINPRESRRHARLLAEADYIYFPIGVAFAGVRGSYPPSRPVLPFQHVVRSFSDSHLCLKLIAGTTCASSCMDTPTPSSGVLLLDLKPAPERPLRRAAIASTTSSERVSWGSTVDERPDGSQYEADYVQHWLELDDARSALQQRHRDLADLEYDRAELEDWSLSLSCEDLRDRQSPFAEITTPGQISLSTLPSIREDDALELEEDVGDCLWNDCGFATVEIDECKGDDPENSEKRWECTGTHSPGGSWSSASDAQDKRSSTALSEDGDCTNVGLDFTRDFYRLVKYESTKSLASNSSRGIASHDANSHLRIHDVQSMAIQDREHALQNVLHFIAEQQKYCRDREESDSMSSRPVSEIRELPPPYAAADFDDDSVGPRSEVSEDRRPDSFGSFSENDSCEAISDRPRVSFSETVSEPRFIAREDPYVESEAFYEELSRIDSSNEIEDLTKVQRKNEINKNVAVSDNDDKEDNSVQFLNSTPNDTETSRSAESIIALKENTVNIILPIIASEIETPKVTFAFTTSETDIAIVDEVISVCKRNTALLTVPEEEEGSSPETSSPQMTESNTTSTSTAETVIISNKNDVKEIRLRERSRIPTLAGKRPPSSPSKGKSKIPVAGKLRQAKSVPNAEPIIVKQENKLSFHEAATSKDVIEELNRMIRQSETGTPGNEPKNDEKNDKGNSHKDSELWAPTGWVHVEKDIDFSDPKARANLLDVMLASSDSSPSSCGSSPAEPPPPYSRLHRLHRSRRQKTAAALRARGLGVVRLGRGASRRPTILGRESLFVRYADPERAAVATFDFLDAFSASTSPEDTLNALPDK

Summary

Interpro
IPR026163   Nckap5l       

Ontologies

GO

Topology

Length:
1121
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02622
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00128
outside
1  -  1121
 
 

Population Genetic Test Statistics

Pi
240.556947
Theta
174.611658
Tajima's D
1.196685
CLR
0.383432
CSRT
0.718314084295785
Interpretation
Uncertain
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