Gene

KWMTBOMO05924  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002788

Annotation

PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(+):14472255-14503629      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.36

CDS

ATGTCCTATGCTTTGCTTGCCGACCTCCAGAACTCTATCAACCCTGGCGGCGCCCGAGTCAGCAGCCCCAGCGGCAGGACCACGTCGCCCGGCGGTCGCACCAGTTCCCCGGGCAGAACTGGGTCTCCTCTAGGCAGAGGCACTTCACCGGGCCGTCTCAGCTCGTCAGGCAGCCTGAGTTCCCCCACCTCCACCGGCTACGGATCCATCAATGGATCTAGGAATATTAGCTCGGATTATGCAAAACCTGCTTCGCCAACTTACCAAAACACAAGCTCATTCCACTCAGAGAAGATGACTCCGCACAAATATACGAGTACCGTCCAAAGCAACTACAGTACCCACACGCCCGGTTACAACGTGGGACAATCGCCAGGCTACGGCAGGACCGGTGGTCGAGGGAACCTGAGCGAGCTGGACACCCTACTCGACGACTTGAGCAGTGCCCGCTACGGGAATTACGCAGAAAAAACTTCGTTCACCGAAAGATCTGTAAATGACAGCTACGGGCGCAGTAACGGAGCCATCAGTCCGGCGTCAGCGAGGCCCACGGTCGACTCCTTGCTGGATCAATTAAGCGCGGAAATACCTAATGGCCGCCAATCCACATCTCCAATACCACCGCCATCGACGGGAGGAACTCTCCCCAGACCGGGCACCAAACAGGTGACCGTCACCGTGCAGGAGACGGTCGTAGAACCCGCTCAGGCTCAGCAACAGATTCCAGTGGCGGCCCCTGTAGTCCGGCACCAGCACCACGCGTCCAGCGCCACCAAGGAACTTGATGACTTGATGGCGTCGCTCTCCGACTTCAAGGTTAGCGGCACAGGGGGAGATAGCGGGACTCACGTGTACAGAGAGAAACGCGCGTGGCAGGAACAGTACCGCACCAACCCGCGTCAACCCGAGTCCGCATCTCTCGAGCATATGCTCGGATCTCTTCGGGCAGACATGAGCCGCCAAGGAGTACAAACCCCCCAGAAGGGATGCTGTAACGCCTGCGAGAAACCAATCGTTGGACAGGTGATCACGGCGCTGGGTCGCACCTGGCACCCTGAGCACTTCACCTGCGCTCACTGCAACCAGGAACTGGGCACGAGGAACTTCTTCGAGCGCGACGGCAGGCCCTACTGCGAACCCGACTACCACAATCTGTTCTCACCGAGATGCGCTTACTGCAACGGACCAATCTTGGATAAATGCGTCACAGCTCTAGAGAAAACGTGGCACACGGAGCACTTCTTTTGCGCTCAATGCGGTCAGCAATTTGGGGAAGAGGGTTTCCATGAAAGGGACGGGAAGCCCTACTGCAGGGCTGATTACTTTGACATGTTCGCCCCCAAATGCGGTGGTTGCAATAAGCCCATAATGGAAAACTATATCTCAGCGCTCAACACCCAGTGGCATCCAGACTGTTTCGTTTGCAAGGACTGCCAGAATCCCGTCAAAGGGAAGTCCTTCTATGCCATGGAAGGGAAGCCGGAATGCCGTGAGCCTTTCCACGGAGGTTCGTTCTTCGAGCACGAGGGCCAACCGTACTGCGAGACGCATTACCACGGAAAGCGAGGGTCATTATGCGCGGGCTGCCACAAACCGATCGCGGGCCGATGCATCACGGCGATGTTCAGGAAATTCCACCCGGAGCACTTCGTCTGCGCGTTTTGCCTTCGACAACTCAACAAAGGCACTTTCAAAGAACAAAACGACAAGCCGTACTGCCACGCGTGCTTTGACAAGCTGTTCGGGTAA

Protein

MSYALLADLQNSINPGGARVSSPSGRTTSPGGRTSSPGRTGSPLGRGTSPGRLSSSGSLSSPTSTGYGSINGSRNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRGNLSELDTLLDDLSSARYGNYAEKTSFTERSVNDSYGRSNGAISPASARPTVDSLLDQLSAEIPNGRQSTSPIPPPSTGGTLPRPGTKQVTVTVQETVVEPAQAQQQIPVAAPVVRHQHHASSATKELDDLMASLSDFKVSGTGGDSGTHVYREKRAWQEQYRTNPRQPESASLEHMLGSLRADMSRQGVQTPQKGCCNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPECREPFHGGSFFEHEGQPYCETHYHGKRGSLCAGCHKPIAGRCITAMFRKFHPEHFVCAFCLRQLNKGTFKEQNDKPYCHACFDKLFG

Uniprot

A0A194Q438   A0A3S2L4Z6   A0A194QSH6   A0A154P5H8   A0A0L7R7B7   A0A195EG22   + More
E2APB8   A0A195BZ05   A0A232EZM3   A0A182Q0H5   A0A195AWX5   A0A182Y8H2   E2C8K4   F4WPX3   A0A2C9GPQ2   A0A2C9GPX0   A0A2C9GPQ1   A0A182VE27   A0A182JGL6   A0A2C9GPQ5   A0A2M4A327   A0A084WCL1   A0A2M4CSZ7   A0A2M4A2A1   A0A2M4A3F3   A0A2M3ZFN6   A0A2M4CTM1   A0A2M4A2B0   U5EP66   A0A2M4BJS3   A0A2M4BJF8   A0A2M4BJM7   A0A2M4BIS9   A0A2M4A3Z0   E0VTT4   Q7PNA2   B0W9X4   Q17PE9   A0A158NHX8   A0A1Q3FK05   A0A1Q3FK38   A0A1Q3FJY5   A0A1Q3FJN5   A0A1Q3FKQ5   A0A1Q3FJP2   A0A1W4XK65   A0A1W4XVB6   A0A1L8DMW9   A0A1L8DMY0   A0A1L8DMM3   A0A0L0BVA0   A0A1L8DMD9   A0A1L8DMM4   A0A1J1IQS1   A0A1J1ISP2   A0A3L8D686   A0A0Q5VK40   A0A0Q5VXX5   B3NM64   A0A1I8NX84   A0A1I8NX97   A0A0Q5VSD4   A0A1I8NX90   A0A1I8NXA2   A0A1I8NX89   A0A1W4V2U6   W8BBY0   A0A0Q9X1Z6   B4MTG9   A0A0Q9WYL0  

Pubmed

26354079    20798317    28648823    25244985    21719571    24438588    + More
20566863    12364791    14747013    17210077    17510324    21347285    26108605    30249741    17994087    24495485   

EMBL

KQ459472    KPJ00109.1    RSAL01000147    RVE45861.1    KQ461175    KPJ07935.1    + More
KQ434809    KZC06380.1    KQ414643    KOC66651.1    KQ978957    KYN27215.1    GL441504    EFN64717.1    KQ978501    KYM93560.1    NNAY01001516    OXU23720.1    AXCN02000642    AXCN02000643    KQ976725    KYM76550.1    GL453666    EFN75734.1    GL888255    EGI63802.1    APCN01000737    GGFK01001727    MBW35048.1    ATLV01022719    KE525336    KFB47955.1    GGFL01004123    MBW68301.1    GGFK01001633    MBW34954.1    GGFK01001847    MBW35168.1    GGFM01006544    MBW27295.1    GGFL01004000    MBW68178.1    GGFK01001643    MBW34964.1    GANO01000288    JAB59583.1    GGFJ01004156    MBW53297.1    GGFJ01003972    MBW53113.1    GGFJ01004135    MBW53276.1    GGFJ01003828    MBW52969.1    GGFK01002121    MBW35442.1    DS235773    EEB16790.1    AAAB01008964    EAA12524.5    DS231866    EDS40541.1    CH477191    EAT48671.1    ADTU01016101    GFDL01007229    JAV27816.1    GFDL01007137    JAV27908.1    GFDL01007233    JAV27812.1    GFDL01007342    JAV27703.1    GFDL01006855    JAV28190.1    GFDL01007297    JAV27748.1    GFDF01006370    JAV07714.1    GFDF01006360    JAV07724.1    GFDF01006371    JAV07713.1    JRES01001284    KNC23951.1    GFDF01006458    JAV07626.1    GFDF01006459    JAV07625.1    CVRI01000058    CRL02587.1    CRL02588.1    QOIP01000012    RLU15746.1    CH954179    KQS61891.1    KQS61890.1    EDV54664.1    KQS61893.1    GAMC01015919    JAB90636.1    CH963852    KRF98236.1    EDW75408.2    KRF98232.1   

Proteomes

UP000053268    UP000283053    UP000053240    UP000076502    UP000053825    UP000078492    + More
UP000000311    UP000078542    UP000215335    UP000075886    UP000078540    UP000076408    UP000008237    UP000007755    UP000075840    UP000075903    UP000075880    UP000030765    UP000009046    UP000007062    UP000002320    UP000008820    UP000005205    UP000192223    UP000037069    UP000183832    UP000279307    UP000008711    UP000095300    UP000192221    UP000007798   

Pfam

PF00412   LIM

Interpro

IPR001781   Znf_LIM        + More
IPR017305   Tgfb1i1/Leupaxin/TGFB1I1       

ProteinModelPortal

A0A194Q438   A0A3S2L4Z6   A0A194QSH6   A0A154P5H8   A0A0L7R7B7   A0A195EG22   + More
E2APB8   A0A195BZ05   A0A232EZM3   A0A182Q0H5   A0A195AWX5   A0A182Y8H2   E2C8K4   F4WPX3   A0A2C9GPQ2   A0A2C9GPX0   A0A2C9GPQ1   A0A182VE27   A0A182JGL6   A0A2C9GPQ5   A0A2M4A327   A0A084WCL1   A0A2M4CSZ7   A0A2M4A2A1   A0A2M4A3F3   A0A2M3ZFN6   A0A2M4CTM1   A0A2M4A2B0   U5EP66   A0A2M4BJS3   A0A2M4BJF8   A0A2M4BJM7   A0A2M4BIS9   A0A2M4A3Z0   E0VTT4   Q7PNA2   B0W9X4   Q17PE9   A0A158NHX8   A0A1Q3FK05   A0A1Q3FK38   A0A1Q3FJY5   A0A1Q3FJN5   A0A1Q3FKQ5   A0A1Q3FJP2   A0A1W4XK65   A0A1W4XVB6   A0A1L8DMW9   A0A1L8DMY0   A0A1L8DMM3   A0A0L0BVA0   A0A1L8DMD9   A0A1L8DMM4   A0A1J1IQS1   A0A1J1ISP2   A0A3L8D686   A0A0Q5VK40   A0A0Q5VXX5   B3NM64   A0A1I8NX84   A0A1I8NX97   A0A0Q5VSD4   A0A1I8NX90   A0A1I8NXA2   A0A1I8NX89   A0A1W4V2U6   W8BBY0   A0A0Q9X1Z6   B4MTG9   A0A0Q9WYL0  

PDB

1X3H     E-value=6.73471e-18,     Score=224

KEGG

101742617    K05760 paxillin | (RefSeq) paxillin

GO

GO:0046872   GO:0005856   GO:0007160   GO:0016740   GO:0003712   GO:0005925   GO:0005829   GO:0005886   GO:1901739   GO:0046843   GO:0035220   GO:0005927   GO:0035218   GO:0043087   GO:0010506   GO:0008270   GO:0003755   GO:0006457   GO:0004842   GO:0016567   GO:0006355   GO:0016818   GO:0003676   GO:0008026   GO:0016597  

Length:

582

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00027

outside

1  -  582

 

 

Pi

243.89109

Theta

166.55403

Tajima's D

0.811671

CLR

0.372806

CSRT

0.608069596520174

Interpretation

Uncertain