Gene

KWMTBOMO05921

Pre Gene Modal

BGIBMGA002786

Annotation

PREDICTED:_peptidyl-prolyl_cis-trans_isomerase-like_2_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(+):14407166-14414810      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.424

CDS

ATGGGGAAACGACAGCATCAAAAAGATAAAATGTATTTAACGTATACGGAATGGACAACTCTCTACGGTGGAAAACGTTCTGGAACGGCTACTGAAGAAGATACAACATTTAAAAGACTTCCATTCGATCACTGTTGTCTTTGTTTGCAGCCCTTTGACGATCCCTACTGTGATGCAGACGGCAATGTATTTGAATTGCAAGCTATCATTGATTTTCGAAAAAAGTTTAAAATTAATCCTGTGACTGGAAAGAAACTTGATATAAAAACTCTAATAAAGTTAAACTTCTTCAAAAATGCTGAAGATGCCTACCACTGCCCAGTATTATTTAAACCCTTTACAAAAAACTCGCATATTGTTGCCATACGCACTAGTGGAAATGTCTACTCTTATGAGGCTGTTGAACAGCTCAATATCAAAGGCAAAAATTGGAAGGACCTGGTTGATGATACACCCTTTGCTGCACGTAATGATATTATCACTATTCAGGACCCTCAAAACTTGGCAAAGTTTAATATATCAAATTTTCATCACATAAAACACAATTTACGTGTTGAAACTGAAGAGGAAATAGCATTGAAAAAAGACCCACATGCAAGATTGAAAACAGTATCTGCCGAAACAAAAGATATATTACAAGAATTAGAAAAGGACTATAAGGCACCAGAAAAGAAAGAAGATCAAAAAGAGTCTGCCGACAAATTCAATGCGGCCCACTATTCCACTGGGAAGGTCGCGGCCAGCTTCACATCGACAGCAATGGTACCGGAGACGACACACGAAGCAGCCATCATATGTGAAGATGAGGTTATTTATGAAAGAACAAAAAAGAAAGGTTATGTAAGACTGGTAACAAATGTAGGACATCTGAACTTTGAATTGTACTGCGACGTAACGCCCAAAACTTGTCACAACTTCATGACACATTGTAAAAATGGATACTACAACGGAACAAAGTTCCACAGGTCTATCAGGAATTTTATGATTCAAGGAGGAGATCCAACGGGCACAGGGTTGGGAGGCGAATCCATTTGGAAGAAACCTTTTGATGATGAAATTAAGCCAAACTTGCACCACACCGGACGAGGAGTCTTGTCTATGGCTAACTCGGGAACCAATACTAACGGATCACAATTTTTCATTACGTTCCGTTCGTGCAAACAGTTGGACGGTAAACACACTATATTCGGGAAGCTGGTCGGCGGTCTGGACACTTTGAACGCCATGGAGTCGATTGAGGTCGACAATAAAGACAGGCCCATACAGGATATAGTTATTGAGGCAGCGCAAGTCTTTGTGGATCCTTTCGCTGAGGCTGAAGAGGAGCTCGCTAAAGAACGGGCAGCAGAATTAAAGCGTAAAGCTGAAGAGAAGGATCCCGGAGTCAGACCTAAAAAAGCGACACAACCCCTTAAAGTATTCAGGGAAGGTGTCGGTAAATACTTGAACCTGCAAGAGTCTGCAACGAAACCTGGAAAAGACCAGGAAATTCCAGCAAAAAAACCCAAAAAAGATGTCACTAGTTTTGGTAATTTTGATACCTGGTAA

Protein

MGKRQHQKDKMYLTYTEWTTLYGGKRSGTATEEDTTFKRLPFDHCCLCLQPFDDPYCDADGNVFELQAIIDFRKKFKINPVTGKKLDIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHIVAIRTSGNVYSYEAVEQLNIKGKNWKDLVDDTPFAARNDIITIQDPQNLAKFNISNFHHIKHNLRVETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADKFNAAHYSTGKVAASFTSTAMVPETTHEAAIICEDEVIYERTKKKGYVRLVTNVGHLNFELYCDVTPKTCHNFMTHCKNGYYNGTKFHRSIRNFMIQGGDPTGTGLGGESIWKKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGKLVGGLDTLNAMESIEVDNKDRPIQDIVIEAAQVFVDPFAEAEEELAKERAAELKRKAEEKDPGVRPKKATQPLKVFREGVGKYLNLQESATKPGKDQEIPAKKPKKDVTSFGNFDTW

Uniprot

H9IZV1   A0A3S2NVS1   A0A212F0G0   A0A194Q526   S4PE85   A0A2A4IYS6   + More
A0A2H1WWG3   A0A0L7KWK8   A0A1B0CIX4   Q16NE3   Q16IE1   A0A1B6F3U2   A0A2C9GQV5   A0A182KSY6   A0A0L0BZX7   A0A182V0Z0   A0A084WHF9   A0A182WZX7   A0A182K8H1   A0A182UH27   A0A1B6I137   A0A182W9D7   B0WTD2   A0A182Y216   A0A034VCZ2   A0A182RQV9   A0A182P1S2   A0A182JKM0   A0A1Q3FCS0   A0A026WII7   A0A1I8MD16   A0A0K8UBJ6   A0A151WR25   A0A1L8DUJ5   A0A182N2L6   A0A1B0DP53   A0A182M705   B3MFM6   W8AVZ5   A0A182QN32   A0A195EH79   A0A1I8P751   W5JD36   F4WPR2   A0A1A9X4W7   A0A182FZR8   A0A154P3D5   K7IWT7   E2APB7   A0A158NHX7   A0A1W4UKZ6   E9IBN0   B4HSV9   A0A1Y1MUX8   A0A1B6F8R0   A0A232EZG8   B3NPK8   A0A336M6W0   A0A1B6DSR5   A0A195C087   A0A0L7R6Z9   A0A0M4E7A1   A0A336MC90   A0A1L8DU38   A0A2A3E544   A0A1B0AF55   A0A0J9RDU0   Q7K231   B4KNZ0   A0A3B0J2Q3   B4GAC7   A0A1A9YFZ5   A0A1B0BS11   B4MJX8   A0A067QFD2   B4P694   Q291S0   A0A0C9QRT2   A0A088A006   A0A0K8TKP6   A0A2J7QZJ1   A0A1A9VU64   A0A0J7KXW6   A0A1B0FPY4   A0A195AWC9   B4LIP4   E0VTT9   A0A195FFJ3   A0A0C9R0H6   B4J466   A0A1B6CWT2   A0A2J7QZJ7   N6USE6   A0A0N0BDW3   D6X1Y7   A0A1W4XIZ5   E2C8K5   U4TY59   A0A0P5V612   E9H7X4  

Pubmed

19121390    22118469    26354079    23622113    26227816    17510324    + More
20966253    26108605    24438588    25244985    25348373    24508170    30249741    25315136    17994087    24495485    20920257    23761445    21719571    20075255    20798317    21347285    21282665    28004739    28648823    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    17550304    15632085    26369729    20566863    23537049    18362917    19820115    21292972   

EMBL

BABH01019079    RSAL01000147    RVE45863.1    AGBW02011105    OWR47197.1    KQ459472    + More
KPJ00105.1    GAIX01004642    JAA87918.1    NWSH01004572    PCG64911.1    ODYU01011572    SOQ57398.1    JTDY01004985    KOB67505.1    AJWK01013857    CH477828    EAT35856.1    CH478086    EAT34025.1    GECZ01024889    JAS44880.1    APCN01003275    JRES01001096    KNC25605.1    ATLV01023810    ATLV01023811    ATLV01023812    KE525347    KFB49653.1    GECU01027074    JAS80632.1    DS232085    EDS34370.1    GAKP01017791    JAC41161.1    GFDL01009670    JAV25375.1    KK107185    QOIP01000012    EZA55830.1    RLU16370.1    GDHF01028373    JAI23941.1    KQ982813    KYQ50316.1    GFDF01004149    JAV09935.1    AJVK01018086    AXCM01009508    CH902619    EDV37716.1    GAMC01017647    JAB88908.1    AXCN02001078    KQ978957    KYN27219.1    ADMH02001585    ETN61966.1    GL888255    EGI63803.1    KQ434809    KZC06381.1    AAZX01011511    GL441504    EFN64716.1    ADTU01016101    GL762111    EFZ22150.1    CH480816    EDW48123.1    GEZM01020010    JAV89461.1    GECZ01023151    JAS46618.1    NNAY01001516    OXU23719.1    CH954179    EDV55775.1    UFQT01000640    SSX26006.1    GEDC01008595    JAS28703.1    KQ978501    KYM93563.1    KQ414643    KOC66650.1    CP012524    ALC42528.1    SSX26007.1    GFDF01004160    JAV09924.1    KZ288379    PBC26614.1    CM002911    KMY94238.1    AE013599    AY061295    AAF58019.1    AAL28843.1    CH933808    EDW09035.1    OUUW01000001    SPP73422.1    CH479181    EDW31879.1    JXJN01019442    CH963846    EDW72417.1    KK853603    KDR06370.1    CM000158    EDW91944.1    CM000071    EAL25042.2    GBYB01006439    JAG76206.1    GDAI01002902    JAI14701.1    NEVH01009069    PNF33993.1    LBMM01002197    KMQ95156.1    CCAG010004164    KQ976725    KYM76553.1    CH940648    EDW61397.1    DS235773    EEB16795.1    KQ981636    KYN38794.1    GBYB01006437    JAG76204.1    CH916367    EDW02672.1    GEDC01019655    JAS17643.1    PNF33994.1    APGK01018457    APGK01018458    APGK01018459    KB740076    ENN81647.1    KQ435848    KOX71004.1    KQ971371    EFA10186.1    GL453666    EFN75735.1    KB631643    ERL84928.1    GDIP01222092    GDIP01119826    GDIP01089713    GDIP01081402    LRGB01003325    JAL83888.1    KZS03253.1    GL732602    EFX72103.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000218220    UP000037510    + More
UP000092461    UP000008820    UP000075840    UP000075882    UP000037069    UP000075903    UP000030765    UP000076407    UP000075881    UP000075902    UP000075920    UP000002320    UP000076408    UP000075900    UP000075885    UP000075880    UP000053097    UP000279307    UP000095301    UP000075809    UP000075884    UP000092462    UP000075883    UP000007801    UP000075886    UP000078492    UP000095300    UP000000673    UP000007755    UP000091820    UP000069272    UP000076502    UP000002358    UP000000311    UP000005205    UP000192221    UP000001292    UP000215335    UP000008711    UP000078542    UP000053825    UP000092553    UP000242457    UP000092445    UP000000803    UP000009192    UP000268350    UP000008744    UP000092443    UP000092460    UP000007798    UP000027135    UP000002282    UP000001819    UP000005203    UP000235965    UP000078200    UP000036403    UP000092444    UP000078540    UP000008792    UP000009046    UP000078541    UP000001070    UP000019118    UP000053105    UP000007266    UP000192223    UP000008237    UP000030742    UP000076858    UP000000305   

PRIDE

H9IZV1    Q7K231    A0A088A006   

Pfam

PF00160   Pro_isomerase        + More
PF04641   Rtf2
PF00169   PH

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR029000   Cyclophilin-like_dom_sf       
IPR020892   Cyclophilin-type_PPIase_CS       
IPR003613   Ubox_domain       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR027799   Rtf2_RING-finger       
IPR001849   PH_domain       
IPR011993   PH-like_dom_sf       

SUPFAM

SSF50891   SSF50891       

Gene 3D

2.40.100.10     3.30.40.10     2.30.29.30    

ProteinModelPortal

H9IZV1   A0A3S2NVS1   A0A212F0G0   A0A194Q526   S4PE85   A0A2A4IYS6   + More
A0A2H1WWG3   A0A0L7KWK8   A0A1B0CIX4   Q16NE3   Q16IE1   A0A1B6F3U2   A0A2C9GQV5   A0A182KSY6   A0A0L0BZX7   A0A182V0Z0   A0A084WHF9   A0A182WZX7   A0A182K8H1   A0A182UH27   A0A1B6I137   A0A182W9D7   B0WTD2   A0A182Y216   A0A034VCZ2   A0A182RQV9   A0A182P1S2   A0A182JKM0   A0A1Q3FCS0   A0A026WII7   A0A1I8MD16   A0A0K8UBJ6   A0A151WR25   A0A1L8DUJ5   A0A182N2L6   A0A1B0DP53   A0A182M705   B3MFM6   W8AVZ5   A0A182QN32   A0A195EH79   A0A1I8P751   W5JD36   F4WPR2   A0A1A9X4W7   A0A182FZR8   A0A154P3D5   K7IWT7   E2APB7   A0A158NHX7   A0A1W4UKZ6   E9IBN0   B4HSV9   A0A1Y1MUX8   A0A1B6F8R0   A0A232EZG8   B3NPK8   A0A336M6W0   A0A1B6DSR5   A0A195C087   A0A0L7R6Z9   A0A0M4E7A1   A0A336MC90   A0A1L8DU38   A0A2A3E544   A0A1B0AF55   A0A0J9RDU0   Q7K231   B4KNZ0   A0A3B0J2Q3   B4GAC7   A0A1A9YFZ5   A0A1B0BS11   B4MJX8   A0A067QFD2   B4P694   Q291S0   A0A0C9QRT2   A0A088A006   A0A0K8TKP6   A0A2J7QZJ1   A0A1A9VU64   A0A0J7KXW6   A0A1B0FPY4   A0A195AWC9   B4LIP4   E0VTT9   A0A195FFJ3   A0A0C9R0H6   B4J466   A0A1B6CWT2   A0A2J7QZJ7   N6USE6   A0A0N0BDW3   D6X1Y7   A0A1W4XIZ5   E2C8K5   U4TY59   A0A0P5V612   E9H7X4  

PDB

1ZKC     E-value=2.34189e-54,     Score=538

KEGG

101743201    K10598 peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-trans

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0003755   GO:0004842   GO:0006457   GO:0016021   GO:0071013   GO:0005634   GO:0000209   GO:0000398   GO:0000413   GO:0034450   GO:0016567   GO:0006355   GO:0016818   GO:0003676   GO:0008026   GO:0016597  

Length:

515

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00405000000000001

Exp number, first 60 AAs:

0.0015

Total prob of N-in:

0.01980

outside

1  -  515

 

 

Pi

175.20392

Theta

143.08982

Tajima's D

-1.198556

CLR

134.014614

CSRT

0.103794810259487

Interpretation

Uncertain