Gene

KWMTBOMO05919

Annotation

tetraspanin_D107_[Bombyx_mori]

Location

Bomo_Chr10(+):14391016-14397884      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

Extracellular   Reliability : 3.097

CDS

ATGTTTTCAGTATTCCTCTTGATCATATTCGTGGCTGAACTGGCTGTGGGCATCGCTGGTTACATGAAGCATACGGACTTGGAAGATTCGGTTATGCGCAACCTGAACGCTTCCATTACTCAATATCCGGTAGACAAGAACGTCCAGAAGACTATTGATATCATACAAACAGACTTGCAATGCTGCGGTATAAACAGTCCGGCCGACTGGGCCGATCACGGTCTGCCCATACCGAGCACGTGCTGCTCCGCCCAGGAGATCAATGACGGCGTCGTCGCGGCCTGCACCGAGAACTCGACCAACTTCCACTCGAAGGGATGTCTTACTAAACTGGTTGTTCACATGAAGGACATTGGTATGGTGCTCGCCGGCGTTGGAGTCGGTATCGCTTTGGTTCAGCTCCTCGGTGTGATATTCGCATGCTGCCTCGCTCGTTCCATTCGCAGCCAATATGAAACAGTTTAA

Protein

MFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKLVVHMKDIGMVLAGVGVGIALVQLLGVIFACCLARSIRSQYETV

Similarity

Belongs to the tetraspanin (TM4SF) family.

Feature

chain  Tetraspanin

Uniprot

Q2F5V7   Q9NB10   Q5MGP8   A0A2H1WWQ3   A0A3S2LWH7   S4PYD2   + More
A0A194QWI4   A0A194Q3I5   I4DMY1   Q60FR9   A0A1E1W138   I4DPV4   A0A0L7KWS2   A0A212F0C8   E9J782   A0A0B5H7U5   A0A1W4XRX4   A0A2M4C2Z6   A0A182F2L9   W5JDD0   A0A2M4CVN0   A0A2M4BYY8   A0A1B0D6J1   A0A195FSB6   A0A2M4AUK4   A0A2M4CKJ9   A0A2M4BYB1   A0A2M4ATY8   A0A2M3ZCD0   A0A060Q7H8   U5EVW1   A0A195EKQ3   T1EB32   A0A2M4CTM9   A0A1I8M784   A0A2J7QZL2   D6X1Y5   A0A182MUZ1   A0A182VTP8   A0A0T6AV57   A0A182VC99   A0A182Y8G9   A0A182L035   A0A195C3K8   A0A182NB46   A0A182TVX3   A0A182QJI5   Q5TQJ1   A0A182IBU2   A0A088AJM5   A0A2A3E8P8   A0A158NJM3   A0A182JDH2   A0A084WCK9   A0A195B6H4   R4UW62   A0A0L7QP89   A0A023EMW2   A0A1B6H4L4   A0A1L8DK25   A0A1L8DK60   A0A1I8NW60   A0A0J7KBL9   E2A971   A0A1J1ILK4   A0A1B6IF02   A0A210PG06   A0A0P6IVF7   A0A182P4P3   C1C4F6   A0A0B7B6P4   E2BUA7   A0A1Q3G1S2   A0A087TFG6   A0A0A1XA90   A0A0K8TX51   E0VTU3   A0A067QFM7   A0A0C9RNX4   A0A1B6J372   A0A034WFT7   Q9VID1   A0A2C9KTG3   A0A1B6FJP4   A0A1B6MUJ9   T1II96   K7IWT9   A0A1B6KYM3   A0A2I9LNV4   B3NLX2   B3MMB6   B4Q4D8   A0A3Q2XPV4   H7CHJ1   A0A2T7PWD3   T1IN95   A0A1B6KDN1  

Pubmed

11122467    16023793    23622113    26354079    22651552    26227816    + More
22118469    21282665    20920257    23761445    25315136    18362917    19820115    25244985    20966253    12364791    14747013    17210077    21347285    24438588    24945155    20798317    28812685    26999592    25830018    20566863    24845553    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15562597    20075255    29248469    17994087    22936249   

EMBL

DQ311316    ABD36260.1    AF274021    AAF90147.1    AY829738    AAV91352.1    + More
ODYU01011572    SOQ57396.1    RSAL01000147    RVE45865.1    GAIX01003493    JAA89067.1    KQ461175    KPJ07931.1    KQ459472    KPJ00103.1    AK402649    BAM19271.1    AB189030    BAD52262.1    GDQN01010346    GDQN01003174    JAT80708.1    JAT87880.1    AK403799    BAM19944.1    JTDY01004985    KOB67504.1    AGBW02011105    OWR47199.1    GL768424    EFZ11326.1    KJ535125    AJF38198.1    GGFJ01010237    MBW59378.1    ADMH02001848    ETN60890.1    GGFL01005216    MBW69394.1    GGFJ01008990    MBW58131.1    AJVK01003639    AJVK01003640    AJVK01003641    AJVK01003642    AJVK01003643    KQ981305    KYN42794.1    GGFK01011133    MBW44454.1    GGFL01001655    MBW65833.1    GGFJ01008908    MBW58049.1    GGFK01010861    MBW44182.1    GGFM01005411    MBW26162.1    HG316497    CDF77374.1    GANO01001692    JAB58179.1    KQ978739    KYN28818.1    GAMD01000403    JAB01188.1    GGFL01004451    MBW68629.1    NEVH01009069    PNF34005.1    KQ971371    EFA10185.1    AXCM01007720    LJIG01022738    KRT78969.1    KQ978292    KYM95449.1    AXCN02000643    AAAB01008964    EAA12176.4    APCN01000738    APCN01000739    APCN01000740    KZ288349    PBC27441.1    ADTU01001946    ADTU01001947    ADTU01001948    ATLV01022709    KE525336    KFB47953.1    KQ976582    KYM79784.1    KC571982    AGM32481.1    KQ414821    KOC60445.1    GAPW01003914    GEHC01000801    JAC09684.1    JAV46844.1    GECZ01000130    JAS69639.1    GFDF01007272    JAV06812.1    GFDF01007258    JAV06826.1    LBMM01009958    KMQ87758.1    GL437711    EFN70056.1    CVRI01000055    CRL01040.1    GECU01022234    JAS85472.1    NEDP02076728    OWF35418.1    GDUN01000926    JAN94993.1    BT081735    ACO51866.1    HACG01040930    CEK87795.1    GL450619    EFN80735.1    GFDL01001278    JAV33767.1    KK114976    KFM63855.1    GBXI01013469    GBXI01006642    GBXI01000751    JAD00823.1    JAD07650.1    JAD13541.1    GDHF01033468    GDHF01008433    GDHF01002375    JAI18846.1    JAI43881.1    JAI49939.1    DS235773    EEB16799.1    KK853603    KDR06366.1    GBYB01012814    GBYB01015237    JAG82581.1    JAG85004.1    GECU01014061    JAS93645.1    GAKP01005394    GAKP01005393    JAC53559.1    AE014134    BT010223    AAF53992.3    AAQ23541.1    GECZ01030572    GECZ01030333    GECZ01025548    GECZ01024288    GECZ01019368    GECZ01016109    GECZ01015276    GECZ01014808    GECZ01009428    GECZ01006774    JAS39197.1    JAS39436.1    JAS44221.1    JAS45481.1    JAS50401.1    JAS53660.1    JAS54493.1    JAS54961.1    JAS60341.1    JAS62995.1    GEBQ01000361    JAT39616.1    JH430149    AAZX01011889    AAZX01017071    GEBQ01023430    JAT16547.1    GFWZ01000074    MBW20064.1    CH954179    EDV54438.1    CH902620    EDV31876.1    CM000361    CM002910    EDX05735.1    KMY91343.1    AB701637    BAL70289.1    PZQS01000001    PVD37729.1    JH431152    GEBQ01030408    JAT09569.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000037510    UP000007151    UP000192223    + More
UP000069272    UP000000673    UP000092462    UP000078541    UP000078492    UP000095301    UP000235965    UP000007266    UP000075883    UP000075920    UP000075903    UP000076408    UP000075882    UP000078542    UP000075884    UP000075902    UP000075886    UP000007062    UP000075840    UP000005203    UP000242457    UP000005205    UP000075880    UP000030765    UP000078540    UP000053825    UP000095300    UP000036403    UP000000311    UP000183832    UP000242188    UP000075885    UP000008237    UP000054359    UP000009046    UP000027135    UP000000803    UP000076420    UP000002358    UP000008711    UP000007801    UP000000304    UP000264820    UP000245119   

PRIDE

Q2F5V7    Q9VID1   

Pfam

PF00335   Tetraspanin

Interpro

IPR008952   Tetraspanin_EC2_sf        + More
IPR000301   Tetraspanin       
IPR018499   Tetraspanin/Peripherin       
IPR018503   Tetraspanin_CS       

SUPFAM

SSF48652   SSF48652       

Gene 3D

1.10.1450.10    

ProteinModelPortal

Q2F5V7   Q9NB10   Q5MGP8   A0A2H1WWQ3   A0A3S2LWH7   S4PYD2   + More
A0A194QWI4   A0A194Q3I5   I4DMY1   Q60FR9   A0A1E1W138   I4DPV4   A0A0L7KWS2   A0A212F0C8   E9J782   A0A0B5H7U5   A0A1W4XRX4   A0A2M4C2Z6   A0A182F2L9   W5JDD0   A0A2M4CVN0   A0A2M4BYY8   A0A1B0D6J1   A0A195FSB6   A0A2M4AUK4   A0A2M4CKJ9   A0A2M4BYB1   A0A2M4ATY8   A0A2M3ZCD0   A0A060Q7H8   U5EVW1   A0A195EKQ3   T1EB32   A0A2M4CTM9   A0A1I8M784   A0A2J7QZL2   D6X1Y5   A0A182MUZ1   A0A182VTP8   A0A0T6AV57   A0A182VC99   A0A182Y8G9   A0A182L035   A0A195C3K8   A0A182NB46   A0A182TVX3   A0A182QJI5   Q5TQJ1   A0A182IBU2   A0A088AJM5   A0A2A3E8P8   A0A158NJM3   A0A182JDH2   A0A084WCK9   A0A195B6H4   R4UW62   A0A0L7QP89   A0A023EMW2   A0A1B6H4L4   A0A1L8DK25   A0A1L8DK60   A0A1I8NW60   A0A0J7KBL9   E2A971   A0A1J1ILK4   A0A1B6IF02   A0A210PG06   A0A0P6IVF7   A0A182P4P3   C1C4F6   A0A0B7B6P4   E2BUA7   A0A1Q3G1S2   A0A087TFG6   A0A0A1XA90   A0A0K8TX51   E0VTU3   A0A067QFM7   A0A0C9RNX4   A0A1B6J372   A0A034WFT7   Q9VID1   A0A2C9KTG3   A0A1B6FJP4   A0A1B6MUJ9   T1II96   K7IWT9   A0A1B6KYM3   A0A2I9LNV4   B3NLX2   B3MMB6   B4Q4D8   A0A3Q2XPV4   H7CHJ1   A0A2T7PWD3   T1IN95   A0A1B6KDN1  

PDB

2M7Z     E-value=0.0016765,     Score=92

KEGG

693101    K06497 CD63 antigen | (RefSeq) tetraspanin D107

PATHWAY

04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005887   GO:0006508   GO:0005488   GO:0016765   GO:0005634   GO:0006355   GO:0016818   GO:0003676   GO:0008026   GO:0016597  

Subcellular location

Membrane  

SignalP

Position:   1 - 19,         Likelihood:  0.969984

 

 

Length:

154

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

42.05316

Exp number, first 60 AAs:

19.1216

Total prob of N-in:

0.92616

POSSIBLE N-term signal

sequence

inside

1  -  1

TMhelix

2  -  21

outside

22  -  117

TMhelix

118  -  140

inside

141  -  154

 

 

Pi

226.568633

Theta

187.797017

Tajima's D

0.685364

CLR

0.235595

CSRT

0.567371631418429

Interpretation

Uncertain