Gene
KWMTBOMO05917
Pre Gene Modal
BGIBMGA000463
Annotation
tetraspanin_D107_[Bombyx_mori]
Full name
Tetraspanin
Location in the cell
PlasmaMembrane Reliability : 4.56
Sequence
CDS
ATGGCCCTCGAAGGTGGAATGTCCTGTGTAAAGTACCTCATGTTTTGCTTCAATCTCCTGTTTGCCATTACGGGATTGATCATCCTGATAGTTGGCATCAGGGCTGAAATAAACTCGTATCCTTACATGAACTTCACCGATGAGAACTTCTACAAGTTCGCTCCGATCGTTCTCATCATTGTCGGCATTATTGTTTTCATTGTCGCGTTCTTCGGCTGCTGTGGCGCTGTCAAAGAGAATCACTGCATGATAATAACGCTATGGTCTGCAGAAGGTTACACTTGGGGATACCAAATTTACAATGGTCAAAGTGTGCAAGTATTTGGTTTGGATACCGGAAGTATAGTAGTAACATTGGCAGAAGGTTTACTTGATGAAGGTCGCTGCATGATAACTGACAACTACTACACGAGCGACCCTTTGACAGAATTTATGTTTTCTCGCAATACAGACAGACCTCTGTGGCACAGTCAATAA
Protein
MALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIIVFIVAFFGCCGAVKENHCMIITLWSAEGYTWGYQIYNGQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFSRNTDRPLWHSQ
Summary
Similarity
Belongs to the tetraspanin (TM4SF) family.
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF00335 Tetraspanin
Interpro
SUPFAM
SSF48652
SSF48652
Gene 3D
ProteinModelPortal
Ontologies
GO
Topology
Subcellular location
Membrane
Length:
158
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
45.74353
Exp number, first 60 AAs:
29.79348
Total prob of N-in:
0.99526
POSSIBLE N-term signal
sequence
inside
1 - 12
TMhelix
13 - 35
outside
36 - 54
TMhelix
55 - 77
inside
78 - 158
Population Genetic Test Statistics
Pi
259.8281
Theta
196.089859
Tajima's D
1.22805
CLR
0.030977
CSRT
0.71906404679766
Interpretation
Uncertain
