Gene

KWMTBOMO05915

Pre Gene Modal

BGIBMGA002919

Annotation

PREDICTED:_tetraspanin-4-like_[Papilio_polytes]

Location

Bomo_Chr10(-):14347557-14357145      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

PlasmaMembrane   Reliability : 4.901

CDS

ATGTTGTCGAAAATATTCACTACGGTGAAATACACATTGGTGACAGTGAATTTTTTGTTCTTGATAACCGGAATTATAATATTGGCTGTCGGAGGCTCGGTGCAAGCTGCCTATAATAATTACCATGAGTTTCTATCGGAGAGGTTTTTCTCTCTTCCCGCCTTTTGTATAGCGACGGGAATTATTATATTCCTCATATCCTTCTCCGGTTTCTATGGAGCCTTCATGGAGAACTACTTAATGAACATGGCGTTTGCGGGTGCCATGATCTTGATGTTCGTTTTTCAACTATCGGCCTGCATAGCTGGTTATGCATTGAAGAGCAACACGGTAGCTTTAGTTCAAAAGCAGCTGTTATCCACCATGGAACTGTACGGACCTGCCTCATTAGAGATCACCAAGCTCTGGGATGAAGTTCAAGGAGACTTCGAATGCTGTGGTGTAGTTAACTCTAGTGACTGGCTTGCGCCCCTCGGGACGCTGGAATCCAGAGGGCTCCCCGTAAGTTGCTGCAGCCACATTTACGGCACCATCCAGCTGTTCAACTGTACGACCGTCGAGGCCTACCCGACTGGTTGTGCCGAAGCGTTCGGTAACTGGGTACAGTCGCACGCGGCGGCAATAGGCGCGGCTGGCATATTCTTAGTTTTAATGCAGGTTTGA

Protein

MLSKIFTTVKYTLVTVNFLFLITGIIILAVGGSVQAAYNNYHEFLSERFFSLPAFCIATGIIIFLISFSGFYGAFMENYLMNMAFAGAMILMFVFQLSACIAGYALKSNTVALVQKQLLSTMELYGPASLEITKLWDEVQGDFECCGVVNSSDWLAPLGTLESRGLPVSCCSHIYGTIQLFNCTTVEAYPTGCAEAFGNWVQSHAAAIGAAGIFLVLMQV

Similarity

Belongs to the tetraspanin (TM4SF) family.

Uniprot

H9J084   A0A2A4IYM5   A0A194QRG1   A0A212F0H8   A0A2H1WHQ5   A0A1E1WEA3   + More
A0A194Q3J6   A0A3S2LVP5   A0A0L7LID7   A0A336N925   A0A336LVF9   U5EZJ8   B3N7U6   K7IWU0   B4KEY4   A0A3B0JH53   A0A0C9QE23   B0WWM6   A0A1L8DKE1   A0A023EL63   B4N098   A0A1W4VM88   Q1HR03   B4M9P5   B4HYS4   A0A0M4EPZ9   A0A0M5J6B1   B3MM83   Q9VLH1   B4GJ37   H7CHJ1   A0A1A9VA64   A0A0J9QZ16   Q29JV0   B4JP50   A0A1I8NCC7   A0A1I8PKV3   A0A195FQC8   A0A1B0AAK9   D3TNV1   A0A182L665   A0A0L0CFI0   A0A1L8EFT9   B4NXJ3   A0A182RGQ4   A0A182Y8B2   A0A182US04   A0A182ICS9   A0A158NJP6   Q7Q1S3   A0A232FCE8   A0A1A9Y1P1   A0A2M3YZD8   A0A182VTW7   T1DLQ6   A0A182PKV3   A0A1B0D6J2   A0A182JNR5   A0A154PIJ4   A0A084VWC1   A0A2M4BXS0   B6DDW1   W5J645   A0A182F4D2   A0A182NAX7   A0A034WG34   A0A1J1ILC1   A0A182J8J5   A0A2M4A1F7   A0A194QSH1   F4WCE1   A0A1B0B298   A0A182SPQ2   A0A2A3E6W7   V9IFS0   A0A195ELK9   A0A195C5J9   A0A088AJF5   A0A151XK38   A0A1L8E9P8   W8C0N6   A0A1Y1MU82   A0A212F0D6   A0A0K8WI46   B4Q7A8   A0A067QFM7   A0A182WZD8   A0A1Q3FNJ5   A0A1B0CUZ7   A0A0A1WGM2   D6X1Y8   E9J783   A0A182TM64   A0A1E1W325   A0A026WS85   E2A972   A0A182G2C2   A0A182MNY8  

Pubmed

19121390    26354079    22118469    26227816    17994087    18057021    + More
20075255    24945155    17204158    11122467    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    15632085    23185243    25315136    20353571    20966253    26108605    17550304    25244985    21347285    12364791    14747013    17210077    28648823    24438588    19178717    20920257    23761445    25348373    21719571    24495485    28004739    24845553    25830018    18362917    19820115    21282665    24508170    20798317    26483478   

EMBL

BABH01019084    BABH01019085    NWSH01004989    PCG64518.1    KQ461175    KPJ07929.1    + More
AGBW02011105    OWR47201.1    ODYU01008695    SOQ52486.1    GDQN01005730    GDQN01001844    JAT85324.1    JAT89210.1    KQ459472    KPJ00102.1    RSAL01000003    RVE54769.1    JTDY01000950    KOB75323.1    UFQS01003761    UFQT01003761    SSX15916.1    SSX35258.1    UFQT01000215    SSX21810.1    GANO01000667    JAB59204.1    CH954177    EDV58307.1    AAZX01000576    CH933807    EDW11953.1    KRG02996.1    OUUW01000006    SPP81515.1    GBYB01012658    JAG82425.1    DS232149    EDS36118.1    GFDF01007247    JAV06837.1    GAPW01003665    GAPW01003664    GAPW01003663    GAPW01003662    JAC09935.1    CH963920    EDW77511.1    KRF98688.1    DQ440291    ABF18324.1    CH940654    EDW57921.1    KRF78024.1    CH480818    EDW52204.1    CP012523    ALC39012.1    ALC39536.1    CH902620    EDV31843.1    KPU73654.1    AE014134    AF274011    AY071356    AAF52719.2    AAF90137.1    AAL48978.1    ACZ94205.1    CH479184    EDW37351.1    AB701637    BAL70289.1    CM002910    KMY89176.1    CH379062    EAL32861.1    KRT05022.1    CH916372    EDV99475.1    KQ981305    KYN42795.1    EZ423103    ADD19379.1    JRES01000477    KNC30957.1    GFDG01001330    JAV17469.1    CM000157    EDW88584.1    APCN01005756    ADTU01001950    AAAB01008980    EAA13868.2    NNAY01000426    OXU28496.1    GGFM01000872    MBW21623.1    GAMD01000291    JAB01300.1    AJVK01003646    AJVK01003647    AJVK01003648    AJVK01003649    KQ434924    KZC11627.1    ATLV01017552    KE525174    KFB42265.1    GGFJ01008709    MBW57850.1    EU934330    ACI30108.1    ADMH02002138    ETN58335.1    GAKP01005680    GAKP01005679    JAC53272.1    CVRI01000055    CRL01039.1    GGFK01001302    MBW34623.1    KPJ07930.1    GL888070    EGI68121.1    JXJN01007522    JXJN01007523    KZ288349    PBC27440.1    JR040956    AEY59336.1    KQ978739    KYN28817.1    KQ978292    KYM95448.1    KQ982052    KYQ60665.1    GFDG01003342    JAV15457.1    GAMC01003917    GAMC01003916    JAC02639.1    GEZM01025139    GEZM01025138    JAV87566.1    OWR47200.1    GDHF01024480    GDHF01011543    GDHF01001754    JAI27834.1    JAI40771.1    JAI50560.1    CM000361    EDX04302.1    KK853603    KDR06366.1    GFDL01005875    JAV29170.1    AJWK01029905    AJWK01029906    GBXI01016642    JAC97649.1    KQ971371    EFA10187.1    GL768424    EFZ11325.1    GDQN01009677    JAT81377.1    KK107119    EZA58823.1    GL437711    EFN70057.1    JXUM01139034    JXUM01139035    JXUM01139036    JXUM01139037    AXCM01001829   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000283053    + More
UP000037510    UP000008711    UP000002358    UP000009192    UP000268350    UP000002320    UP000007798    UP000192221    UP000008792    UP000001292    UP000092553    UP000007801    UP000000803    UP000008744    UP000078200    UP000001819    UP000001070    UP000095301    UP000095300    UP000078541    UP000092445    UP000075882    UP000037069    UP000002282    UP000075900    UP000076408    UP000075903    UP000075840    UP000005205    UP000007062    UP000215335    UP000092443    UP000075920    UP000075885    UP000092462    UP000075881    UP000076502    UP000030765    UP000000673    UP000069272    UP000075884    UP000183832    UP000075880    UP000007755    UP000092460    UP000075901    UP000242457    UP000078492    UP000078542    UP000005203    UP000075809    UP000000304    UP000027135    UP000076407    UP000092461    UP000007266    UP000075902    UP000053097    UP000000311    UP000069940    UP000075883   

PRIDE

Q9VLH1   

Pfam

PF00335   Tetraspanin        + More
PF14698   ASL_C2
PF00206   Lyase_1

Interpro

IPR008952   Tetraspanin_EC2_sf        + More
IPR018499   Tetraspanin/Peripherin       
IPR000301   Tetraspanin       
IPR018503   Tetraspanin_CS       
IPR009049   Argininosuccinate_lyase       
IPR022761   Fumarate_lyase_N       
IPR020557   Fumarate_lyase_CS       
IPR000362   Fumarate_lyase_fam       
IPR024083   Fumarase/histidase_N       
IPR029419   Arg_succ_lyase_C       
IPR008948   L-Aspartase-like       

SUPFAM

SSF48652   SSF48652        + More
SSF48557   SSF48557       

Gene 3D

1.10.1450.10     1.10.275.10    

CDD

cd01359  Argininosuccinate_lyase

ProteinModelPortal

H9J084   A0A2A4IYM5   A0A194QRG1   A0A212F0H8   A0A2H1WHQ5   A0A1E1WEA3   + More
A0A194Q3J6   A0A3S2LVP5   A0A0L7LID7   A0A336N925   A0A336LVF9   U5EZJ8   B3N7U6   K7IWU0   B4KEY4   A0A3B0JH53   A0A0C9QE23   B0WWM6   A0A1L8DKE1   A0A023EL63   B4N098   A0A1W4VM88   Q1HR03   B4M9P5   B4HYS4   A0A0M4EPZ9   A0A0M5J6B1   B3MM83   Q9VLH1   B4GJ37   H7CHJ1   A0A1A9VA64   A0A0J9QZ16   Q29JV0   B4JP50   A0A1I8NCC7   A0A1I8PKV3   A0A195FQC8   A0A1B0AAK9   D3TNV1   A0A182L665   A0A0L0CFI0   A0A1L8EFT9   B4NXJ3   A0A182RGQ4   A0A182Y8B2   A0A182US04   A0A182ICS9   A0A158NJP6   Q7Q1S3   A0A232FCE8   A0A1A9Y1P1   A0A2M3YZD8   A0A182VTW7   T1DLQ6   A0A182PKV3   A0A1B0D6J2   A0A182JNR5   A0A154PIJ4   A0A084VWC1   A0A2M4BXS0   B6DDW1   W5J645   A0A182F4D2   A0A182NAX7   A0A034WG34   A0A1J1ILC1   A0A182J8J5   A0A2M4A1F7   A0A194QSH1   F4WCE1   A0A1B0B298   A0A182SPQ2   A0A2A3E6W7   V9IFS0   A0A195ELK9   A0A195C5J9   A0A088AJF5   A0A151XK38   A0A1L8E9P8   W8C0N6   A0A1Y1MU82   A0A212F0D6   A0A0K8WI46   B4Q7A8   A0A067QFM7   A0A182WZD8   A0A1Q3FNJ5   A0A1B0CUZ7   A0A0A1WGM2   D6X1Y8   E9J783   A0A182TM64   A0A1E1W325   A0A026WS85   E2A972   A0A182G2C2   A0A182MNY8  

KEGG

101743758    K06497 CD63 antigen | (RefSeq) CD63 antigen-like

PATHWAY

04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005887   GO:0004056   GO:0042450   GO:0005515   GO:0005488   GO:0016765   GO:0005634   GO:0006355   GO:0016818   GO:0003676   GO:0008026   GO:0016597  

PANTHER

PTHR43814  

Subcellular location

Membrane  

Length:

220

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

83.82183

Exp number, first 60 AAs:

33.84473

Total prob of N-in:

0.98230

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  49

TMhelix

50  -  72

inside

73  -  83

TMhelix

84  -  106

outside

107  -  220

 

 

Pi

24.79666

Theta

186.932864

Tajima's D

1.12211

CLR

0.053677

CSRT

0.699615019249038

Interpretation

Uncertain