Gene

KWMTBOMO05914  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002920

Annotation

PREDICTED:_CD63_antigen-like_[Papilio_polytes]

Location

Bomo_Chr10(-):14318913-14336225      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

PlasmaMembrane   Reliability : 3.636

CDS

ATGCTGTTCGTCTCTCTCTTCGGCTGCATCGGTGCCCTGAAAGAGAGTACCTGCTTGGTCAACATTTTCGCAGTGATCCTTAGCATCGTGTTCATTCTGGAGATCGCGGCGGCCATCACTGCCTACAGTCTTCGCAGCGAGGTCTCACAATTTCTGGACAAAAAACTTAGGGAAGCACTTCCTCTATACTACCAGCATGCTGAGGCGCAGGATGCATTTGACTTCATTCAATACGAGTTGAACTGCTGCGGCGTCGATAGCTACATGGACTGGCATGCGGTCGACCCCCCCACTGGAGGGACCGGCATTAGCTTTGCCAACCTCACGGTCCCCGATTCGTGCTGCGCCCAGTCCCACATGACTGTCGTCGGTGAAGAGACGATTGTAGAGTGCCATAAGATCTATGCCAACGGTTGCCTGCCCAGAGTCTATTATTTGGTTAACCAAAGCGCTGGACTACTTGGAGCTGGCGCGTTGACCATCTGCTTCATTCAGATAATCGGAATCGTTTTCTCGTTCTCACTGGCGAGCTCTATCCGTAAAGCCAAGATCGAACGCGAACGCAGGCGCTGGGAGATCCAGGAGCGGATGATCAACGCCCACACTTCCTTGAACCCTAACAACGAGAAAGTCGCCCCGGTGGTGTACGTTCCGTTCCAAGGACAGGCCGGCGCTTAA

Protein

MLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFLDKKLREALPLYYQHAEAQDAFDFIQYELNCCGVDSYMDWHAVDPPTGGTGISFANLTVPDSCCAQSHMTVVGEETIVECHKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQIIGIVFSFSLASSIRKAKIERERRRWEIQERMINAHTSLNPNNEKVAPVVYVPFQGQAGA

Similarity

Belongs to the tetraspanin (TM4SF) family.

Uniprot

H9J085   A0A2A4J4A5   A0A2A4IVI7   A0A194QQZ4   A0A194Q9L4   A0A212F0E7   + More
S4NX85   Q9NB09   A0A3S2PLD7   A0A2H1WHE8   A0A2A4IU03   A0A3S2KXX3   Q16LT3   A0A023EMK4   A0A182H2Z1   A0A023EPW8   A0A023ENQ5   A0A023EMJ0   A0A023ESE8   B0W1E6   A0A1Q3FKK5   A0A1B6KDN1   A0A1Y1K6J6   A0A1B6MCQ8   A0A1J1HRI6   A0A1L8DK41   A0A1B6HCW8   A0A1L8DJV1   A0A1L8DJK5   A0A2J7QZJ0   A0A0J7L6K8   A0A1L8DKC0   A0A1B6HHR4   A0A1Y1K6D0   A0A1B6GIS6   D6X0E2   A0A1B6FPI6   W8AVJ1   A0A0A1X025   A0A1B0D6J3   U5EP47   A0A151XJT2   E2A973   A0A1B0CUZ7   A0A182IPX2   A0A067QFM7   A0A182RK40   W8ARL8   A0A3M0IVD9   A0A0K8W976   A0A0K8VE31   J3JUM3   A0A1S4GZL2   A0A182X5V5   A0A182IBI8   A0A182LRX5   C3UTC3   A0A182SHP8   A0A182NGQ4   A0A182WFF0   A0A182K5V7   A0A034W8M1   A0A0L0BXQ5   B4Q7A9   A0A195C3M0   A0A182P1L4   E9J782   A0A1A9W2K0   C1C4F6   A0A182YN77   A0A182QIV2   B4NXJ4   A0A3B3RV58   A0A1B0B299   A0A3B1IPS9   A0A3B3RV68   A0A158NJN4   A0A1L8EF34   A0A1L8EAQ7   B4KEY5   A0A1A9Y1P2   Q9VLH0   K1QBC6   A0A232FCT9   A0A1B0AAL1   A0A1A9VA65   D3TQ22   B4HYS5   A0A1V4J584   B3N7U7   F4WCE0   A0A195B5J4   A0A1W4VMH2   T1P8S2   A0A3B1J8E6   A0A0K8TPC7   A0A3N0YM71   A0A067QFC7   A0A1B6E2I7  

Pubmed

19121390    26354079    22118469    23622113    11122467    17510324    + More
24945155    26483478    28004739    18362917    19820115    24495485    25830018    20798317    24845553    22516182    23537049    12364791    19364528    25348373    26108605    17994087    22936249    21282665    25244985    17550304    29240929    25329095    21347285    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22992520    28648823    20353571    21719571    25315136    26369729   

EMBL

BABH01019090    NWSH01003126    PCG66905.1    NWSH01007000    PCG63160.1    KQ461175    + More
KPJ07928.1    KQ459472    KPJ00101.1    AGBW02011105    OWR47202.1    GAIX01012262    JAA80298.1    AF274022    AAF90148.1    RSAL01000003    RVE54770.1    ODYU01008695    SOQ52488.1    PCG63159.1    RSAL01000945    RVE41032.1    CH477891    CH477347    EAT35294.1    EAT42969.1    GAPW01003030    JAC10568.1    JXUM01106293    JXUM01106294    KQ565042    KXJ71418.1    GAPW01003029    JAC10569.1    GAPW01003028    JAC10570.1    GAPW01003045    JAC10553.1    GAPW01001917    JAC11681.1    DS231821    EDS45016.1    GFDL01007003    JAV28042.1    GEBQ01030408    JAT09569.1    GEZM01091225    GEZM01091224    GEZM01091223    GEZM01091222    JAV57013.1    GEBQ01006270    JAT33707.1    CVRI01000010    CRK88809.1    GFDF01007246    JAV06838.1    GECU01035122    GECU01005586    JAS72584.1    JAT02121.1    GFDF01007437    JAV06647.1    GFDF01007436    JAV06648.1    NEVH01009069    PNF34006.1    LBMM01000455    KMQ98296.1    GFDF01007259    JAV06825.1    GECU01033473    JAS74233.1    JAV57012.1    GECZ01007431    JAS62338.1    KQ971372    EFA09586.1    GECZ01017644    JAS52125.1    GAMC01017840    GAMC01017837    JAB88718.1    GBXI01011327    GBXI01009628    JAD02965.1    JAD04664.1    AJVK01003649    GANO01000316    JAB59555.1    KQ982052    KYQ60664.1    GL437711    EFN70058.1    AJWK01029905    AJWK01029906    KK853603    KDR06366.1    GAMC01017838    JAB88717.1    QRBI01000226    RMB92422.1    GDHF01006425    GDHF01004904    JAI45889.1    JAI47410.1    GDHF01015183    JAI37131.1    APGK01003084    APGK01003085    APGK01018485    APGK01018486    APGK01018487    BT126938    KB740076    KB735111    KB631643    AEE61900.1    ENN81658.1    ENN83444.1    ERL84920.1    AAAB01008944    APCN01000703    AXCM01001804    FJ654711    ACP18832.1    GAKP01007898    GAKP01007897    JAC51054.1    JRES01001270    KNC24049.1    CM000361    CM002910    EDX04303.1    KMY89177.1    KQ978292    KYM95447.1    GL768424    EFZ11326.1    BT081735    ACO51866.1    AXCN02002079    CM000157    EDW88585.1    JXJN01007521    ADTU01001951    GFDG01001477    JAV17322.1    GFDG01002972    JAV15827.1    CH933807    EDW11954.1    AE014134    AF274012    AY122216    AAF52720.1    AAF90138.1    AAM52728.1    JH818108    EKC18846.1    NNAY01000426    OXU28495.1    CCAG010023894    EZ423524    ADD19800.1    CH480818    EDW52205.1    LSYS01009212    OPJ67316.1    CH954177    EDV58308.1    GL888070    EGI68120.1    KQ976582    KYM79783.1    KA644525    AFP59154.1    GDAI01001361    JAI16242.1    RJVU01036174    ROL47010.1    KDR06365.1    GEDC01031511    GEDC01024465    GEDC01019324    GEDC01018344    GEDC01005153    GEDC01000862    JAS05787.1    JAS12833.1    JAS17974.1    JAS18954.1    JAS32145.1    JAS36436.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000283053    + More
UP000008820    UP000069940    UP000249989    UP000002320    UP000183832    UP000235965    UP000036403    UP000007266    UP000092462    UP000075809    UP000000311    UP000092461    UP000075880    UP000027135    UP000075900    UP000269221    UP000019118    UP000030742    UP000076407    UP000075840    UP000075883    UP000075901    UP000075884    UP000075920    UP000075881    UP000037069    UP000000304    UP000078542    UP000075885    UP000091820    UP000076408    UP000075886    UP000002282    UP000261540    UP000092460    UP000018467    UP000005205    UP000009192    UP000092443    UP000000803    UP000005408    UP000215335    UP000092445    UP000078200    UP000092444    UP000001292    UP000190648    UP000008711    UP000007755    UP000078540    UP000192221    UP000095301   

PRIDE

H9J085    Q9VLH0   

Pfam

PF00335   Tetraspanin        + More
PF04218   CENP-B_N
PF14698   ASL_C2
PF00206   Lyase_1

Interpro

IPR000301   Tetraspanin        + More
IPR018499   Tetraspanin/Peripherin       
IPR018503   Tetraspanin_CS       
IPR008952   Tetraspanin_EC2_sf       
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       
IPR000048   IQ_motif_EF-hand-BS       
IPR009049   Argininosuccinate_lyase       
IPR022761   Fumarate_lyase_N       
IPR020557   Fumarate_lyase_CS       
IPR000362   Fumarate_lyase_fam       
IPR024083   Fumarase/histidase_N       
IPR029419   Arg_succ_lyase_C       
IPR008948   L-Aspartase-like       

SUPFAM

SSF48652   SSF48652        + More
SSF46689   SSF46689       
SSF48557   SSF48557       

Gene 3D

1.10.1450.10     1.10.275.10    

CDD

cd01359  Argininosuccinate_lyase

ProteinModelPortal

H9J085   A0A2A4J4A5   A0A2A4IVI7   A0A194QQZ4   A0A194Q9L4   A0A212F0E7   + More
S4NX85   Q9NB09   A0A3S2PLD7   A0A2H1WHE8   A0A2A4IU03   A0A3S2KXX3   Q16LT3   A0A023EMK4   A0A182H2Z1   A0A023EPW8   A0A023ENQ5   A0A023EMJ0   A0A023ESE8   B0W1E6   A0A1Q3FKK5   A0A1B6KDN1   A0A1Y1K6J6   A0A1B6MCQ8   A0A1J1HRI6   A0A1L8DK41   A0A1B6HCW8   A0A1L8DJV1   A0A1L8DJK5   A0A2J7QZJ0   A0A0J7L6K8   A0A1L8DKC0   A0A1B6HHR4   A0A1Y1K6D0   A0A1B6GIS6   D6X0E2   A0A1B6FPI6   W8AVJ1   A0A0A1X025   A0A1B0D6J3   U5EP47   A0A151XJT2   E2A973   A0A1B0CUZ7   A0A182IPX2   A0A067QFM7   A0A182RK40   W8ARL8   A0A3M0IVD9   A0A0K8W976   A0A0K8VE31   J3JUM3   A0A1S4GZL2   A0A182X5V5   A0A182IBI8   A0A182LRX5   C3UTC3   A0A182SHP8   A0A182NGQ4   A0A182WFF0   A0A182K5V7   A0A034W8M1   A0A0L0BXQ5   B4Q7A9   A0A195C3M0   A0A182P1L4   E9J782   A0A1A9W2K0   C1C4F6   A0A182YN77   A0A182QIV2   B4NXJ4   A0A3B3RV58   A0A1B0B299   A0A3B1IPS9   A0A3B3RV68   A0A158NJN4   A0A1L8EF34   A0A1L8EAQ7   B4KEY5   A0A1A9Y1P2   Q9VLH0   K1QBC6   A0A232FCT9   A0A1B0AAL1   A0A1A9VA65   D3TQ22   B4HYS5   A0A1V4J584   B3N7U7   F4WCE0   A0A195B5J4   A0A1W4VMH2   T1P8S2   A0A3B1J8E6   A0A0K8TPC7   A0A3N0YM71   A0A067QFC7   A0A1B6E2I7  

PDB

5TCX     E-value=3.1488e-07,     Score=127

KEGG

101743908    no KO assigned | (RefSeq) CD63 antigen-like

GO

GO:0016021   GO:0003677   GO:0005887   GO:0004056   GO:0042450   GO:0035188   GO:0005515   GO:0005488   GO:0016765   GO:0005634   GO:0006355   GO:0016818   GO:0003676   GO:0008026   GO:0016597  

PANTHER

PTHR43814  

Subcellular location

Membrane  

Length:

225

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

45.8516

Exp number, first 60 AAs:

22.80469

Total prob of N-in:

0.87616

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  153

TMhelix

154  -  176

inside

177  -  225

 

 

Pi

190.219352

Theta

170.787815

Tajima's D

0.158485

CLR

1.953666

CSRT

0.417179141042948

Interpretation

Uncertain