Gene
KWMTBOMO05910
Pre Gene Modal
BGIBMGA002783
Annotation
PREDICTED:_probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Amyelois_transitella]
Location in the cell
Nuclear Reliability : 4.831
Sequence
CDS
ATGTTCGAGCACTCAGTCAAAGTACCGAGACACTATAAAATAGCAGCGAATATCTTAAAAAAAGTTTCCACTGAAGGCGGCAGTGTTAAGACTTTGTTATACGACGATAAACTCCGTCACTTCAGGACCAATGTGCTTTTTGCACTGATAACAGAGACCATTAAACATTCTGATGTCATTACCAAAATATTTGAAAGCTGTGACATACTGCAAAATGAAACCCGACTAGATCCGTGGCTAGCGAAAATACTCACAGCAGAGCTGCTATATGGTAAAAAAGTTTTACCGGGAAAAAGTAAACCAGAGCAAACAATCTCATCTTACAAAGAAAATTTTGAAAAATATCTATCTGAACATCAAGATGATTCGCAGATTCAAGATGTTCCAAAACCTCGTTACGTGCGCATAAACACGAACTTGTTGACAACATCGGATGCAATCAGAGCCTTCCAAGATGAAGGGTACCACTTCGTTCGCTGTACGTCAGGATCCTATGAAGACTACCTCAAGCAGATTCAGAATCTTTCCGAAGATGACTTCACCCAGGATTATCATGTCAAAACGATATTTGTATTTCCGCCGGGAACTAAACTACATGACCATGAACTTTATTTTGAGAGCAAAATTATTTTACAGAATAAGGCAACGGCCATGGCGGTTCACTTGCTGGCCCCTCCTTCTGGTAGCATAGTTTTGGACATGTGCGCTGCACCCGGCATGAAGACAACGCAAACAGCAGCCTATATGAGAAACAACGGTAAAATATACGCAATCGAGAGGAACGAGAAACGATTTGAAACGTTGCGTGATTTCGTTAACAAAACCGGATCTCATTGTGTCGAACCAATCCACCGAGACTGTCTGGAGATAAAGAAAGGAGAATTCGATGACGTGGAATATATACTACTGGACCCTAGCTGCTCGGGATCTGGTATGGATATAAGCGTTCACAACTATATAGAAGAGAGCAGATTGGCGAAGCTCACGTCGTTACAAGAGAAATTTTTGAAACACGCCATGAACGCTTTTCCCCGAGCCAAAAGGATAGTGTACAGCACATGTTCGTTGTTCCCCGAGGAAAATGAAAGGGTCATAACCAATGTTGTTAAGACATCAAGGACTAAATGGAGAGTGCAAGATGTTAAGGAATTACTGAAAGGCCAGTGGAAGAACTTCGGGTCAGCTATGTACGGAAGCATGGGGACCAGGTGTATGTACGCCCGGCAGGATTCAGATTTGACTACAGGCTTTTTTTTAGCGGTTTTGGACAGAGACCCTAAAGATCTAGAGAAAAGTTTGAAAAATCAAGAACAGAATGATGAAGTGGTTGAGGAGGAAGTCTGTGAGAAAGATAAAGAATCAAAAGCCGACTATGAACAAGATAGGGACGTGAATGAATTAGATACGCAAGTAGATTCAGTACAGAAACGAAAAAAGAAGAAAGAGAGATCAGACGAAACTCACTCAACAATTATTGATTCAGAAGGAAATAATTTAATAGTTGATACTATGTCTGAAGACAATGCCTTAAGGGTGAGTGAATCAGAAACATCAAAGAAGGAAAAGAAGAAGAAAAAATTAAAAGATACTGAATATGATTCTATCGAAATTACTACTGAAAATAACATTGACATTAATGAAAAACATAACAAAATGCTAAATAAGAATAAAGTTGACGACACAGCTAAATGTGAAAATACTGAAAAAGACAAACTGATTGTGGATGCCGACTTAGAAGAACCCGTCAAAAAGAAGAAAAAGAAAAAAGATAAGCGTGACGAAACAGAAGAATATAATGTTGAAAACGGTAATGCAAAAAGGCAATCAAAAAAGAGAAGTAATAACAATGATTTTAATGAAATTGCAGAGAAGACAGAAAATATTGAATCAGACCAAGTGCCAAAAAAGAAAAAGAAAAACAAAAATTAA
Protein
MFEHSVKVPRHYKIAANILKKVSTEGGSVKTLLYDDKLRHFRTNVLFALITETIKHSDVITKIFESCDILQNETRLDPWLAKILTAELLYGKKVLPGKSKPEQTISSYKENFEKYLSEHQDDSQIQDVPKPRYVRINTNLLTTSDAIRAFQDEGYHFVRCTSGSYEDYLKQIQNLSEDDFTQDYHVKTIFVFPPGTKLHDHELYFESKIILQNKATAMAVHLLAPPSGSIVLDMCAAPGMKTTQTAAYMRNNGKIYAIERNEKRFETLRDFVNKTGSHCVEPIHRDCLEIKKGEFDDVEYILLDPSCSGSGMDISVHNYIEESRLAKLTSLQEKFLKHAMNAFPRAKRIVYSTCSLFPEENERVITNVVKTSRTKWRVQDVKELLKGQWKNFGSAMYGSMGTRCMYARQDSDLTTGFFLAVLDRDPKDLEKSLKNQEQNDEVVEEEVCEKDKESKADYEQDRDVNELDTQVDSVQKRKKKKERSDETHSTIIDSEGNNLIVDTMSEDNALRVSESETSKKEKKKKKLKDTEYDSIEITTENNIDINEKHNKMLNKNKVDDTAKCENTEKDKLIVDADLEEPVKKKKKKKDKRDETEEYNVENGNAKRQSKKRSNNNDFNEIAEKTENIESDQVPKKKKKNKN
Summary
Similarity
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF01189 Methyltr_RsmB-F
SUPFAM
SSF53335
SSF53335
ProteinModelPortal
PDB
2B9E
E-value=1.31701e-45,
Score=463
Ontologies
GO
Topology
Length:
642
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01943
Exp number, first 60 AAs:
0.00093
Total prob of N-in:
0.00173
outside
1 - 642
Population Genetic Test Statistics
Pi
231.368214
Theta
161.700771
Tajima's D
1.560993
CLR
0.42901
CSRT
0.799610019499025
Interpretation
Uncertain
