SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05908
Pre Gene Modal
BGIBMGA002922
Annotation
ABC_transporter_[Bombyx_mori]
Full name
Protein white      
Location in the cell
PlasmaMembrane   Reliability : 2.309
 

Sequence

CDS
ATGACTGCCGGAAACGAAGAACAAGAGCCCCTAATATCAACTTCGGTTGATAATCAGCGCGTAACATACAACAACTCCCCACAGGATGGTCAAACGCCAAATGACTCGCCACGATCAAGTGTCGGTGAAGTCACTGTGGCCATACCTCAAAATCGCAACTACGGAGCCATCGGAGGTATTGAAAAAGTTACTTACACGTGGGCCGATGTCAACGCTTTCGCCACAGAGTCCAGATCGAGAGGAAGAAGGTTCTGGAGCTTTTGGAAAAATTCTTCGGATCGCATGTTCCAGCAAAGAAAGCAGTTGCTTAGAAATGTAAACGGAGCGGCCTATCCTGGTGAACTGCTGGCCATCATGGGATCGTCGGGAGCCGGAAAGACCACACTCCTCAATACGCTTACGTTCAGAACGCCCGGTGGTGTTGTCGCCACTGGTACCAGGGCGTTGAATGGGCAACCGGCCACTCCTGACGCTTTGACAGCGCTGTCGGCTTATGTCCAGCAACAGGATCTGTTCATAGGCACTTTGACCGTGCGAGAGCATTTGGTATTTCAGGCGATGGTGAGAATGGATCGCCACATACCATACGCTCAGAGAATGAAGAGAGTTCAAGAAGTTATTCAAGAGTTGGCGCTGTCGAAATGCCAGAACACAGTGATCGGTATACCCGGTCGACTGAAGGGCATATCGGGGGGTGAGATGAAGCGGCTTTCCTTCGCCAGTGAAGTCCTCACGGATCCTCCTCTCATGTTCTGCGACGAACCCACCTCTGGGCTTGATTCATTTATGGCCCAAAACGTTATACAGGTACTGAAAGGCTTGGCACAGAAGGGCAAGACCGTGGTCTGCACAATTCACCAGCCCTCTTCAGAGCTTTACGCTATGTTTGACAAGCTCCTCATAATGGCTGACGGAAGAGTTGCTTTCTTAGGATCATCTGATGAAGCTTTCCAGTTCTTCAAAGAGCTGGGCGCCGCGTGTCCCGCTAACTACAACCCGGCTGACCACTTCATCCAACTCCTCGCCGGAGTACCTGGAAGAGAGGAGGTCACGAGGCACACCATAGATACAGTTTGCACGGCCTTCGCCAAATCCGAGATCGGGTGTAGGATAGCTGCGGAAGCTGAAAATGCGCTCTATAATGAACGTAAGATACAGGCCGGGCTAGCGGACGCGCCGTGGGCCATGTCGTCGACGACGCGAGCCCGCCGCTCCCCGTACAAGGCGTCGTGGTGCACGCAGTTCCGGGCCGTGCTGTGGCGCTCCTGGCTCTCCGTCACCAAGGAGCCGATGCTCATCAAAGTTCGCTTCCTACAGACCATTATGGTGTCGATACTGATAGGCGTCATATACTTCGGCCAGAACTTGGACCAGGACGGGGTGATGAACATCAACGGGGCGATCTTCATGTTCCTAACGAACATGACGTTCCAGAACATATTCGCTGTTATTAACGACCCGTGA
Protein
MTAGNEEQEPLISTSVDNQRVTYNNSPQDGQTPNDSPRSSVGEVTVAIPQNRNYGAIGGIEKVTYTWADVNAFATESRSRGRRFWSFWKNSSDRMFQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTLTFRTPGGVVATGTRALNGQPATPDALTALSAYVQQQDLFIGTLTVREHLVFQAMVRMDRHIPYAQRMKRVQEVIQELALSKCQNTVIGIPGRLKGISGGEMKRLSFASEVLTDPPLMFCDEPTSGLDSFMAQNVIQVLKGLAQKGKTVVCTIHQPSSELYAMFDKLLIMADGRVAFLGSSDEAFQFFKELGAACPANYNPADHFIQLLAGVPGREEVTRHTIDTVCTAFAKSEIGCRIAAEAENALYNERKIQAGLADAPWAMSSTTRARRSPYKASWCTQFRAVLWRSWLSVTKEPMLIKVRFLQTIMVSILIGVIYFGQNLDQDGVMNINGAIFMFLTNMTFQNIFAVINDP

Summary

Description
Part of a membrane-spanning permease system necessary for the transport of pigment precursors into pigment cells responsible for eye color. White dimerize with brown for the transport of guanine. Scarlet and white complex transports a metabolic intermediate (such as 3-hydroxy kynurenine) from the cytoplasm into the pigment granules.
Subunit
Heterodimer of white with either brown or scarlet.
Similarity
Belongs to the PI3/PI4-kinase family.
Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
Keywords
ATP-binding   Complete proteome   Membrane   Nucleotide-binding   Pigment   Reference proteome   Transmembrane   Transmembrane helix   Transport   Glycoprotein  
Feature
chain  Protein white
EMBL
AB445460    BAH03523.1    EU722903    ACD99701.1    AF229609    AAF61569.1    + More
BABH01019098    BABH01019099    BABH01019100    BABH01019101    BABH01019102    BABH01019103    BABH01019104    BABH01019105    KQ459472    KPJ00092.1    KQ461175    KPJ07919.1    ODYU01005100    SOQ45637.1    AGBW02011105    OWR47210.1    KU754476    ANW09738.1    KM667971    AJQ21779.1    KU754477    ANW09739.1    RSAL01000003    RVE54777.1    AF245662    AAF63207.1    NWSH01005714    PCG64016.1    AB191788    BAD54748.1    MH172526    QAA95933.1    GEDC01026272    JAS11026.1    LC368084    BBC77943.1    GECU01023128    JAS84578.1    GBYB01000322    JAG70089.1    ADTU01015824    KQ434792    KZC05434.1    GBYB01000323    JAG70090.1    GL440027    EFN66383.1    KZ288215    PBC32436.1    QOIP01000005    RLU22270.1    KQ414727    KOC62606.1    KQ982194    KYQ59053.1    KQ435713    KOX79246.1    KF828804    AIN44121.1    KK852575    KDR20987.1    KU376474    ANO53447.1    GECZ01003552    JAS66217.1    MH105806    AWC08636.1    KQ976870    KYN07740.1    KQ976737    KYM75916.1    GL888393    EGI61708.1    GEZM01084033    JAV60820.1    ABLF02031566    GBRD01011135    GBRD01007802    JAG54689.1    GDHC01004115    JAQ14514.1    AH011253    AF442746    KQ971372    AAL40947.1    EFA09849.1    AF422804    AAL56571.1    GL452135    EFN77860.1    GFXV01007225    MBW19030.1    APGK01018646    APGK01018647    KB740081    ENN81632.1    KK107293    EZA53360.1    KB632220    ERL90182.1    KQ979763    KYN19244.1    KQ981208    KYN44888.1    ACPB03022306    CH902625    EDV34941.1    LJIJ01000010    ODN06152.1    OUUW01000015    SPP88489.1    CH954180    EDV45682.1    SPP88490.1    CH916370    EDV99695.1    GFDL01015424    JAV19621.1    DS231926    EDS26946.1    CH940672    KRF77745.1    CM000162    EDX01323.1    X51749    X02974    AB028139    AE014298    AL133506    X76202    EDW57384.1    CH379064    KRT06475.1    HM000003    ADG04715.1    KRK06073.1    EDY72595.1    CH964239    EDW81927.1    LNIX01000003    OXA56819.1    U64875    AAB06578.1    AAAB01008846    DQ335250    ABC69732.1    APCN01001132    CH477256    EJY57442.1    CH933814    EDW05654.1    ATLV01017197    KE525157    KFB42008.1    U29484    U29485    U29486    GANO01002309    JAB57562.1    U88851    AAC04894.1    AM887687    CAP09074.1    AXCM01001655    JXJN01008099    IACF01003113    LAB68742.1    GDHF01033204    JAI19110.1   
Pfam
PF01061   ABC2_membrane        + More
PF00005   ABC_tran
PF00613   PI3Ka
PF00454   PI3_PI4_kinase
PF00794   PI3K_rbd
PF00792   PI3K_C2
PF02192   PI3K_p85B
Interpro
IPR027417   P-loop_NTPase        + More
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR013525   ABC_2_trans       
IPR005284   Pigment_permease/Abcg       
IPR003593   AAA+_ATPase       
IPR000341   PI3K_Ras-bd_dom       
IPR042236   PI3K_accessory_sf       
IPR002420   PI3K_C2_dom       
IPR011009   Kinase-like_dom_sf       
IPR000403   PI3/4_kinase_cat_dom       
IPR018936   PI3/4_kinase_CS       
IPR003113   PI3K_adapt-bd_dom       
IPR029071   Ubiquitin-like_domsf       
IPR036940   PI3/4_kinase_cat_sf       
IPR015433   PI_Kinase       
IPR016024   ARM-type_fold       
IPR035892   C2_domain_sf       
IPR001263   PI3K_accessory_dom       
SUPFAM
SSF52540   SSF52540        + More
SSF54236   SSF54236       
SSF48371   SSF48371       
SSF56112   SSF56112       
Gene 3D
PDB
6FFC     E-value=3.71567e-60,     Score=588

Ontologies

Topology

Subcellular location
Membrane  
Cytoplasmic granule membrane  
Length:
487
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
39.74561
Exp number, first 60 AAs:
0.0004
Total prob of N-in:
0.04064
outside
1  -  434
TMhelix
435  -  453
inside
454  -  459
TMhelix
460  -  482
outside
483  -  487
 
 

Population Genetic Test Statistics

Pi
233.075815
Theta
173.090898
Tajima's D
1.04472
CLR
0.508733
CSRT
0.673366331683416
Interpretation
Uncertain
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