SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05906
Pre Gene Modal
BGIBMGA002922
Annotation
ATP_dependent_transmembrane_transporter_protein_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.592
 

Sequence

CDS
ATGATTGGGGTATTCTGCTCTGAACTACCAATCTTCATCAGAGAGCACCACTCGGGAATGTATCGAGCCGACGTCTATTTCTTATCGAAGACGTTAGCCGAAGCTCCCGTTTTCGCCACTATACCATTAGTCTTCACAACTATAGCTTATTACATGATCGGATTGAACCCAGATCCGAAGAGGTTCTTCATCGCTTCAGGATTGGCTGCTCTGGTTACGAACGTCGCTACTTCGTTCGGTTATTTAATATCCTGTGCCAGCAGCAGCGTCAGTATGGCAGCCTCCGTTGGTCCTCCAATCATCATCCCCTTTATGCTATTTGGTGGATTCTTCTTGAATTCTGGGTGA
Protein
MIGVFCSELPIFIREHHSGMYRADVYFLSKTLAEAPVFATIPLVFTTIAYYMIGLNPDPKRFFIASGLAALVTNVATSFGYLISCASSSVSMAASVGPPIIIPFMLFGGFFLNSG

Summary

Similarity
Belongs to the PI3/PI4-kinase family.
EMBL
NWSH01003289    PCG66614.1    KY564059    ASO76408.1    AK404815    BAM20309.1    + More
AF229609    AAF61569.1    AB445460    BAH03523.1    BABH01019098    BABH01019099    BABH01019100    BABH01019101    BABH01019102    BABH01019103    BABH01019104    BABH01019105    NWSH01005714    PCG64016.1    EU722903    ACD99701.1    KU754477    ANW09739.1    ODYU01005100    SOQ45637.1    KU754476    ANW09738.1    RSAL01000003    RVE54777.1    KQ459472    KPJ00092.1    KQ461175    KPJ07919.1    KM667971    AJQ21779.1    AGBW02011105    OWR47210.1    GEBQ01031766    JAT08211.1    KQ979763    KYN19244.1    KQ976870    KYN07740.1    KK107293    EZA53360.1    GECZ01003552    JAS66217.1    QOIP01000005    RLU22270.1    NEVH01015327    PNF26870.1    LC368084    BBC77943.1    ADTU01015824    KK852575    KDR20987.1    KQ981208    KYN44888.1    GL888393    EGI61708.1    GECU01023128    JAS84578.1    KQ982194    KYQ59053.1    KQ976737    KYM75916.1    LBMM01003652    KMQ93279.1    KQ435713    KOX79246.1    KQ414727    KOC62606.1    KQ434792    KZC05434.1    NNAY01000361    OXU28894.1    GBYB01000323    JAG70090.1    KZ288215    PBC32436.1    GBYB01000322    JAG70089.1    KU376474    ANO53447.1    MH105806    AWC08636.1    ACPB03022306    GEDC01026272    JAS11026.1    GL440027    EFN66383.1    ABLF02031566    AB191788    BAD54748.1    GGMS01005364    MBY74567.1    MH172526    QAA95933.1    GFXV01007225    MBW19030.1    GDIQ01180846    JAK70879.1    GDIP01041545    JAM62170.1    GDIQ01205549    GDIQ01205548    JAK46176.1    KF828804    AIN44121.1    GBHO01021188    GBHO01021186    GBHO01021185    JAG22416.1    JAG22418.1    JAG22419.1    GDIQ01026153    JAN68584.1    GDIP01016265    JAM87450.1    CH479197    EDW27836.1    EDW27840.1    GDIP01157241    JAJ66161.1    GDIQ01130277    JAL21449.1    OUUW01000015    SPP88490.1    GDHC01004115    JAQ14514.1    CH379064    EDY72595.1    SPP88489.1    KRT06475.1    GDIQ01066540    JAN28197.1    GDIQ01217487    GDIQ01199753    JAK34238.1    GDIQ01232276    JAK19449.1    GBRD01011135    GBRD01007802    JAG54689.1    GDIQ01161752    JAK89973.1    GDIP01115976    JAL87738.1    GDIP01232080    JAI91321.1    LJIJ01000010    ODN06152.1    JH432008    GDIQ01251237    GDIQ01251236    JAK00488.1    GDIQ01251235    JAK00490.1    GDIQ01121918    JAL29808.1    GDIQ01252056    GDIQ01252055    JAJ99669.1    GDIQ01203902    GDIQ01203901    JAK47823.1    GDIQ01127627    GDIQ01126033    JAL24099.1    GDIQ01126032    JAL25694.1    GDIQ01168113    JAK83612.1    U97104    AAC61893.1    GAKP01017893    GAKP01017891    JAC41061.1    GDIQ01168114    JAK83611.1    GDHF01033402    GDHF01005555    JAI18912.1    JAI46759.1    GDIQ01205547    JAK46178.1    GDIQ01226227    JAK25498.1    GDIQ01223877    JAK27848.1    GDIQ01202296    GDIQ01202295    GDIQ01202294    JAK49429.1    CH940672    KRF77745.1    EDW57384.1    AH012033    GBXI01016111    AAN38825.1    JAC98180.1    CH916370    EDV99695.1    GDIQ01030805    JAN63932.1    GDIQ01201000    GDIQ01200999    GDIQ01200998    GDIQ01199754    GDIQ01175450    GDIQ01098684    GDIQ01059162    JAK50726.1    GDIQ01268145    GDIQ01233735    GDIQ01155472    GDIQ01152717    GDIQ01106933    JAK99008.1    GDIQ01142919    GDIP01069799    JAL08807.1    JAM33916.1   
Pfam
PF01061   ABC2_membrane        + More
PF00005   ABC_tran
PF00613   PI3Ka
PF00454   PI3_PI4_kinase
PF00794   PI3K_rbd
PF00792   PI3K_C2
PF02192   PI3K_p85B
PF13193   AMP-binding_C
Interpro
IPR013525   ABC_2_trans        + More
IPR027417   P-loop_NTPase       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR005284   Pigment_permease/Abcg       
IPR003593   AAA+_ATPase       
IPR000341   PI3K_Ras-bd_dom       
IPR042236   PI3K_accessory_sf       
IPR002420   PI3K_C2_dom       
IPR011009   Kinase-like_dom_sf       
IPR000403   PI3/4_kinase_cat_dom       
IPR018936   PI3/4_kinase_CS       
IPR003113   PI3K_adapt-bd_dom       
IPR029071   Ubiquitin-like_domsf       
IPR036940   PI3/4_kinase_cat_sf       
IPR015433   PI_Kinase       
IPR016024   ARM-type_fold       
IPR035892   C2_domain_sf       
IPR001263   PI3K_accessory_dom       
IPR025110   AMP-bd_C       
IPR001736   PLipase_D/transphosphatidylase       
SUPFAM
SSF52540   SSF52540        + More
SSF54236   SSF54236       
SSF48371   SSF48371       
SSF56112   SSF56112       
Gene 3D
PDB
6HCO     E-value=5.20712e-08,     Score=130

Ontologies

Topology

Length:
115
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
65.54689
Exp number, first 60 AAs:
21.54261
Total prob of N-in:
0.08743
POSSIBLE N-term signal
sequence
outside
1  -  32
TMhelix
33  -  55
inside
56  -  61
TMhelix
62  -  84
outside
85  -  89
TMhelix
90  -  112
inside
113  -  115
 
 

Population Genetic Test Statistics

Pi
270.553673
Theta
19.762943
Tajima's D
0.588026
CLR
0.64577
CSRT
0.545422728863557
Interpretation
Uncertain
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