SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05896
Pre Gene Modal
BGIBMGA002780
Annotation
PREDICTED:_uncharacterized_protein_LOC101744303_isoform_X3_[Bombyx_mori]
Location
Bomo_Chr10(+):13607266-13627764      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.932
 

Sequence

CDS
ATGGCCTCGCGGGGAGACAAAGGGAATGGAAATGGCGAGGAGCAAATTGTGGAGACGTTAGCTGAAGTGTTCCGCTGCTTCATCTGTATGGAGAAGCTGGTGGATGCACATCTGTGTCCACACTGCTCAAAGTTGTGTTGTTATGCTTGTGTGCGGCGTTGGTTGACGGAGCAACGCTCCCAATGTCCTCACTGTCGAGCTGCACTACACCTACATGAGTTGGTGAATTGTCGCTGGGTTGAAGAGGTCACTCAGCAAATAGAGACCATGCAACAAACTAACACCGCCAGCCACCGTGAGAATTATCGTGATAGATGCCCTAATCATCAAGAAAAACTTACTGTCTATTGCTGGACGTGTCGTCGCTGTATATGTCATCAGTGCGCTCTCTGGGGTGGCACCCATTCGGGGCACACCTTCAAACCGCTGGAAGAGGTATATGAGCAACATGTTACTCAGATACGTGATGAAGTCACTCAACTGCGGAGAAGGCTTATGGAGCTAATTAGCCTTGTCCAGGATGTTGAACGCAATGTAGAATCAGTGAGAGCAGCAAAAGATGAACGAGTGCGTGAGATTCGCAATGCCGTTGAGCTGATGATCTCCAGATTGGATTCTGCATTGAAGGCTAAACTGCTTACTTTAATGGGACAGAAGAATAGCCTCACTCAGGAGACGGAGCAGCTTGAACATTTGCTACAGGAGATTGAACATCAACTACATACTAGTACAAGATCAGAGTTGATAGCACGGAGTGGTGATCTATCAAAGATGATACATCAAGTGCGAAAGAAGCCAATGGCTAGTTTTGTCACTGCCCCCGTACCGGCTGATTTTCACAGTGAAATCGTTCCGAGTTACGACAGCAGCACTTTCCCGCTAGCAAACTTCACTCAGCTCCAACACGCGGCCGCGCCCGTCTACTCGGCCCCATTACACGTCAACGGTCTATGTTGGAGGCTGAAGGTGTACCCAGATGGCAATGGTGTAGTTCGAGGGAACTATCTCTCCGTATTCTTGGAGCTCAGTGCCGGATTGCCAGAGACTTCAAAGTATGAGTATCGAGTGGAAATGTTGCACCAAGTGTCGCGCGACCCCTCCAAGAACATTGTAAGGGAATTCGCGTCCGACTTTGAAGTCGGCGAATGTTGGGGCTACAATCGTTTCTTCAGACTTGATCTGTTGGCCAGCGAGGGGTACTTGAACCCAGAAACCGATACCTTAATATTGAGGTTCCAAGTACGTCCGCCTACGTTCTATCAACGTTGCCGCGACCAGCAGTGGTACATAAACCAACTGATTACAATGCAGAATCAACACGTACTGCAGATCAATGATCTCAAAGAGCGCCTCTCGTTGGAGATGTCGCGGAACTCACTGGCGGCCACTCGCGCTGTCACGACGGGCACGAGCAGTTCGCAGTCCAACGCCGGCCCGAACGAGGCCGACAACCCCGCGCAGAACAACCCCGTCGACGGTAACTCTGTCAATGATGTCTTAGTGTTGTGGAAGCAATGCGGCCAGCACGGCGCTCTCAACAGTACGAGAATGTCTAACGATATCCTAAACACAGCCATGTTTGCTGAGGACAGCCGTAATAATGAAGTGTCTAGTCAATCGGCCAGTGCCTTCGGCTTCGGAGACTACGCTCAGTCTATGGACACGAGACGAATGGCGCAACCTCACACTTTGCTCGCCCCTTATAATCTACCTTCTACCTCACGTTCAGCAAACTCCCTTCATGTATCCGGCGCGGACAACATGGCGCTGGTGAGCTTGCACACGCTGCTCAGCGCCGCCAACACGCCCAGCCGCGCGCCCAACAAGCTGCCCAACAAAATGCCACGCACCGACAAACAGGTTCCAGCTAAGGACTCCACATTGACTGCCGTGGCCAGCAGTCCAGCAACGGAAATAAGTCAATCGGCCTCGAACGTGTTGCTGTGCTCCTCGATGTCGTCGCCGGAGTTGAACGCGGCGGCTCCCAGCGCGGAGGCCGCGTGTGCCTCCCACAGCGGTCGAGCCAAGACTGAAGGCGAAACGGAGTGCGACAACCGCAACCCGGCCCGCGGTGCGCACGCCGCCTCCGAGTCCAGCAGCGACACCGGGGAGTTGATGTTCAGCGAATTAGAGGTATTTGCCGACGAGACCCACACCGTTCATGTCGACGAAAACTCGAACGAAGAGAATGACGTTGACGACGAGACCATGTCGGGCGAGAACGACATAGAGGGCGCCTGCGGGTACAGCTCGCGGGACGGCTCGGACATCCTGTCGCGGCTGCTGTGCGCGGAGGCGGGACCGGACCGCGCCGCGCTGTCGGCCACCGCGCACCACGACGCCGACCCGCAGCTGTCCACGGCCGCGCACACCGACATGCTGCTGCTCAACCTCATGCGGATCAACGGACTCACGCCGAAACCCTCCGCCAAGAACGGTCCGAAACGCAATTGGAACGGTCAGAGCTCCGCGGGGATTCTCAGTCGCGGCGCTCACGCCCCCCGCCCCCCGCGGCGAGGCACCCCGCTGCACCCCGCCACCCCCCTCAACCATCCCGCCTCGCACCGACCGCGGCGCACACCCCTTTCCCCTGGACAACTGCGCCACAGACGTCCTGCCAACCTGAACTACGGGCCGACCCCTCCCGGCACGCCGGAGCGCGGCGCGGTGTCGCCCGTCCCCGACCTGGCACTGCACGACTACTGGCCCTCCGTGTCCTCCGTCAGCGACAATGACGAGGACACGTTGTTCGACATGTTGCTGAACAGCCTGTCGCTCGAGGGGGCGGGGGAGCCGCGCGCCCCCACCCCGCCCGTGCAGCCGTGGTCCCCCGCGCACCCCGCCCCGCCGCCGCCCCCGCACCCCGCCCCCACCGCGCCCCCCGACCTGGACTGA
Protein
MASRGDKGNGNGEEQIVETLAEVFRCFICMEKLVDAHLCPHCSKLCCYACVRRWLTEQRSQCPHCRAALHLHELVNCRWVEEVTQQIETMQQTNTASHRENYRDRCPNHQEKLTVYCWTCRRCICHQCALWGGTHSGHTFKPLEEVYEQHVTQIRDEVTQLRRRLMELISLVQDVERNVESVRAAKDERVREIRNAVELMISRLDSALKAKLLTLMGQKNSLTQETEQLEHLLQEIEHQLHTSTRSELIARSGDLSKMIHQVRKKPMASFVTAPVPADFHSEIVPSYDSSTFPLANFTQLQHAAAPVYSAPLHVNGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMLHQVSRDPSKNIVREFASDFEVGECWGYNRFFRLDLLASEGYLNPETDTLILRFQVRPPTFYQRCRDQQWYINQLITMQNQHVLQINDLKERLSLEMSRNSLAATRAVTTGTSSSQSNAGPNEADNPAQNNPVDGNSVNDVLVLWKQCGQHGALNSTRMSNDILNTAMFAEDSRNNEVSSQSASAFGFGDYAQSMDTRRMAQPHTLLAPYNLPSTSRSANSLHVSGADNMALVSLHTLLSAANTPSRAPNKLPNKMPRTDKQVPAKDSTLTAVASSPATEISQSASNVLLCSSMSSPELNAAAPSAEAACASHSGRAKTEGETECDNRNPARGAHAASESSSDTGELMFSELEVFADETHTVHVDENSNEENDVDDETMSGENDIEGACGYSSRDGSDILSRLLCAEAGPDRAALSATAHHDADPQLSTAAHTDMLLLNLMRINGLTPKPSAKNGPKRNWNGQSSAGILSRGAHAPRPPRRGTPLHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVPDLALHDYWPSVSSVSDNDEDTLFDMLLNSLSLEGAGEPRAPTPPVQPWSPAHPAPPPPPHPAPTAPPDLD

Summary

Uniprot
A0A2W1BRH5   A0A212EKU3   A0A194QQZ1   A0A3S2LVQ4  
Pubmed
28756777    22118469    26354079   
EMBL
KZ149998    PZC75380.1    AGBW02014216    OWR42078.1    KQ461175    KPJ07912.1    + More
RSAL01000003    RVE54782.1   
Proteomes
UP000007151    UP000053240    UP000283053   
Pfam
PF00643   zf-B_box        + More
PF00917   MATH
Interpro
IPR013083   Znf_RING/FYVE/PHD        + More
IPR008974   TRAF-like       
IPR000315   Znf_B-box       
IPR001841   Znf_RING       
IPR003649   Bbox_C       
IPR002083   MATH/TRAF_dom       
IPR037299   TRIM37_MATH       
SUPFAM
SSF49599   SSF49599       
Gene 3D
2.60.210.10     3.30.40.10    
CDD
cd03773  MATH_TRIM37
 cd00021  BBOX
ProteinModelPortal
A0A2W1BRH5   A0A212EKU3   A0A194QQZ1   A0A3S2LVQ4  
PDB
3LRQ     E-value=1.53518e-36,     Score=387

Ontologies

KEGG
101744303    K10608 tripartite motif-containing protein 37 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase T
PATHWAY
04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)
GO
GO:0016567   GO:0008270   GO:0016874   GO:0046872   GO:0005515   GO:0005622   GO:0016765   GO:0005634   GO:0006355   GO:0016818   GO:0003676   GO:0008026   GO:0016597  

Topology

Length:
964
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00034
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00003
outside
1  -  964
 
 

Population Genetic Test Statistics

Pi
209.168223
Theta
177.391957
Tajima's D
0.815427
CLR
0.565671
CSRT
0.607169641517924
Interpretation
Uncertain
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