SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05886
Pre Gene Modal
BGIBMGA002932
Annotation
PREDICTED:_NADPH_oxidase_4-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.063
 

Sequence

CDS
ATGGCTGGTCGCGTGATAAGCTTGAAATTAAGCTGCCCCGACTTGGAGTTCAAATGTCGCGCGGGTCAATACGTGCTGTTGCAGTGTTTGGATTCTTCGCTCATAGAATGGCATCCTTTCACTGTTGTCAAGGTTCCTACAGAAAACCAAAGATACTTTATAGTCTGGATAAGAGTTAAAGGCGATTGGACTGACGCCTTAGAGAAACTGTTGCTTTATACAAGACCGAATACTTTGAATATATTGGTCGACGGTCCATTTTCAAGTCCCATGGAAGGCGTCAGTTGGTGTGAAGTCGCCATATGTGTGGCTGCCGGAGTTGGAATCACGCCTTTTGTACCGGTTTTACATCATATGCTACAAAACCCACGGAGTCGATTTCCCGGCAGAGTCCATTTAATATGGATAGTGAGAAGCGAAAACGAACTCGCGTGGCTCGCAGATTTAGCAAACAAAACTATATTACAGCTTCGAACCGCGAATCGACCAGATCGACTACATCTGGAGCTTTACGTAACCAAAGACAATGTACAGACGAAAGCTCACACCGTTTCTATCGACGAGAAAGGAAGTCTTACTCATGTAGTGCGAGATAATGTTACCGATGACGAAAAAACAACCCTACTGACTCCGAATAAGAGAAGTCCGTATACTAAAGCAGAATCCAGAAATAGTTGTGATGTGATCAAAGAGTATCCCGTGCTTGGGTGCAGAGTACTGAGAGGCAGGCCATACTGGGACCGCGTATTCGGTTTTTGGGTTCATTTCTATCCAGAACGCCATTTGAACTTATATTGCTGCGGACCGAAGAAATTAGTGAAAGCATTAAGACACAAATGTGGATACACGTCTAGCACTACGAAGACCAAGTTTACTTTCGTTCATGAAAGCTTTTCATGA
Protein
MAGRVISLKLSCPDLEFKCRAGQYVLLQCLDSSLIEWHPFTVVKVPTENQRYFIVWIRVKGDWTDALEKLLLYTRPNTLNILVDGPFSSPMEGVSWCEVAICVAAGVGITPFVPVLHHMLQNPRSRFPGRVHLIWIVRSENELAWLADLANKTILQLRTANRPDRLHLELYVTKDNVQTKAHTVSIDEKGSLTHVVRDNVTDDEKTTLLTPNKRSPYTKAESRNSCDVIKEYPVLGCRVLRGRPYWDRVFGFWVHFYPERHLNLYCCGPKKLVKALRHKCGYTSSTTKTKFTFVHESFS

Summary

EMBL
BABH01019172    KQ461175    KPJ07904.1    KQ459302    KPJ01704.1    NWSH01004649    + More
PCG64820.1    NWSH01001476    PCG71131.1    KZ149998    PZC75371.1    KP666171    AKM16733.1    RSAL01000003    RVE54790.1    AGBW02014216    OWR42086.1    ODYU01009104    SOQ53281.1    JTDY01000777    KOB75917.1    GEDC01024646    JAS12652.1    JXUM01094813    JXUM01094814    JXUM01094815    JXUM01094816    KQ564154    KXJ72671.1    AAAB01008844    EAA06046.6    DS232107    EDS35018.1    AXCN02000040    APCN01003125    ATLV01012999    KE524833    KFB37111.1    CH477643    EAT37894.1    CM012449    RVE64629.1    NHOQ01001971    PWA20474.1    HADW01010170    SBP11570.1    KK734465    KFR08396.1    KL448103    KFO80243.1    KL218504    KFP06039.1    KK543367    KFP31540.1    KL226341    KFM12264.1    AYCK01010016    AYCK01010017    GBYX01434155    JAO47171.1    KK758160    KFP44002.1    KB104468    ELK33220.1    KL871085    KGL90187.1    KL224722    KFW62882.1    KL411053    KFR02877.1    KL480925    KFO07967.1    AADN05000588    KL216159    KFV68138.1    KN122620    KFO29238.1    KL376233    KFP84022.1    HADY01023501    SBP61986.1    KB744860    EOA94299.1    AAGW02008620    AAGW02008621    AAGW02008622    AAGW02008623    AAGW02008624    AAGW02008625    AAGW02008626    AAGW02008627    AAGW02008628    AAPE02025357    AAPE02025358    AAPE02025359    KK692144    KFQ22128.1    KK388090    KFV52611.1    KL207000    KFV88602.1    AQIB01098603    AQIB01098604    AQIB01098605    AQIB01098606    AQIB01098607    AQIB01098608    AQIB01098609    AQIB01098610    AQIB01098611    AQIB01098612    LSYS01000827    OPJ89950.1    KE164192    EPQ15849.1    ADFV01110741    ADFV01110742    ADFV01110743    ADFV01110744    ADFV01110745    ADFV01110746    ADFV01110747    AEMK02000070    KK718917    KFO60094.1    CP026245    AWO99134.1   
Pfam
PF08030   NAD_binding_6        + More
PF08022   FAD_binding_8
PF01794   Ferric_reduct
Interpro
IPR013121   Fe_red_NAD-bd_6        + More
IPR017938   Riboflavin_synthase-like_b-brl       
IPR039261   FNR_nucleotide-bd       
IPR017927   FAD-bd_FR_type       
IPR013112   FAD-bd_8       
IPR000778   Cyt_b245_heavy_chain       
IPR013130   Fe3_Rdtase_TM_dom       
IPR017907   Znf_RING_CS       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       
SUPFAM
SSF63380   SSF63380        + More
SSF52343   SSF52343       
Gene 3D
PDB
5O0X     E-value=2.13975e-22,     Score=260

Ontologies

Topology

Length:
299
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.70900000000001
Exp number, first 60 AAs:
0.00336
Total prob of N-in:
0.08498
outside
1  -  299
 
 

Population Genetic Test Statistics

Pi
236.545878
Theta
216.802783
Tajima's D
1.414646
CLR
0.367893
CSRT
0.760861956902155
Interpretation
Uncertain
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