Gene
KWMTBOMO05880
Annotation
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
Location in the cell
Mitochondrial Reliability : 1.505 Nuclear Reliability : 1.467
Sequence
CDS
ATGGCATGGTATCGACATATATCTGCTCCGGATGATACCTCATACCTTGAATACCCCGGCTACGTATTGGAGCACAACTTCCTGCGTAAAGCCGGGGTGTGCGTATTCGTCCGGGCTGATGTCTGTTGTCGCCGTCTTCGGGGCCTCGAACAACGGGACCTGTCCCTCTTGTGGCTGCGCGTAGATCACGGGGGCCGTAGCCGAATCTACGCGTGCCTGTACAGGTCCCACAGCAGTGATGCAGGTTCAGCTCTGTTTGAGCATGTGCAAGAGGGGACTAACCGCGTGCTTGAGCAGTACCCATCTGCGGAGGTGGTGGTTCTTGGAGACTTTAACGCTCACCACCAAGAGTGGTTGGGGTCCAGAACCACTGACCTCCCGGGTCGGACTGCCTACGATTTCGCCTTGGCCTACGGCTTCTCCCAGCTGGTGACACAGCCCACCCGTGTCCCAAATATCGAGGGGCACGAGCCTTCTTTGTTGGACCTTCTGCTGACCACAGATCCGGCCGGATACAGTGTGGTGGTCGACGCTCCGCTTGGATCGTCTGATCACTGCCTTATTCGTGCTGCCGTACCACTCTCTCGTCCTGATCGTCGAACGACGACCGGGTATCGAAGAGTTTGGCGGTATATGTCAGCAGATTGGGATGGATTGCGTGAATTTTACGCATTCTACCCATGGGGGCGGTTCTGCTTTTCCTCTGCTGATCCTGACGTCTGTGCGGACCGTCTTAAAGACGTGGTGCTCCAGGGGATGGAATTGTTTATTCCCTCCTCTGAAGTGCCCGTTGGGGGTCGCAGCAGACCCTGGTATAATAATGCCAGCAGGGATGCTGCACACCTCAAGCGGTCCGCATACGTGGCATGGGATAATGCCAGGAGACGTCGGGATCCTAACATCTCAGGGGAAAGGCGGAAATATAACGCCGCTTCCAGGTCCTACAAGAAGGTTATTGCCAGGGCGAAATCGGAGCACGTTGCTAGAATTGGCGAGCGACTGAAGAGCTATCCCTCTGGGAGCCGTGCTTTTTGGTCGCTCGCCAAAGCTGCAGAAGGTAACTTTTGCAGGTCTAGTCTCCCACCACTACGCAAGTCCGATGACAGTCTGGCCCATAGTGCGAAAGAGAAGGCTGACCTTCTGGTCAAACTCTTCGCCTCGAACTCGACTGTGGACGACGGGGGTGCCACACCACCGAACATCCTCCGGTGTGATAGTTCCCTGCCGGAGATCTGCTTTACACAGTGTGCAGTCAGGCGGGAACTCCGACTCCTGGACGTCCATAAGTCGAGTGGGCCAGACGGCATCCCTGCAGTGGTTCTGAAAACGTGCGCCCCTGAGCTGACGCCTGCGCTAACGCGTTTGTATCGCCTCTCTTATTGCACTAACAGGGTTCCGTCTTCATGGAAGACTGCCCACGTCCACCCTATCCCCAAGAAGGGTGACCGGTCGGACCCATCGAGCTATAGGCCTATCGCGATAACTTCCTTGCTTTCCAAGGTGATGGAGCGAATAATTAATATACAACTCCTGAAGTATCTGGAGGATAGCCAGCTGATCAGTGACCGACAGTACGGTTTCCGTCACGGTCGCTCAGCTGGCGATCTTCTTGTATACCTTACTCACAGGTGGGCTGAAGCCTTGGAGAGCAAGGGCGAGGCTCTTGCTGTGAGCCTTGATGTCGCGAAGGCCTTCGACAGGGTCTGGCATAGGGCACTTCTATCGAAGCTACCATCTTACGGAATCCCCGAGGGTCTCTGCAAGTTCGGTGCTCTCCCCCACCTTTTCATCCTGTATATCAATGACATGCTGTCTATTGATGGCATGCATTGCTATGCGGATGACAGCACGGGGGATGCGCGATACATCGGCCATCAGAGTCTCTCTCGGAGCGTGGTGCAAGAGAGACGATCAAAACTTGTGTCTGAACTGGAGAACTATCTGGGGCGAGTCTCCGAATGGGGTGAATTGAACTTGGTTCAATTCAACCCGATAAAGACACAAGTTTGCGCGTTCACTGCGAAGAAGGACCCCTTTGTCATGGCGCCGCAATTCCAAGGAGTATCCCTGCAACCTTCCGAGAGTATCGGGATACTTGGGGTCGACATTTCGAGCGATGTCCAGTTTCGGAGTCATTTGGAAGGCAAAGCCAAGTTGGCGTCCAAAATGCTGGGAGTCCTCAACAGAGCGAAGCGGTACTTCACGCCTGGACAAAGACTTTTGCTTTATAAAGCACAAGTCCGGCCTCGCATGGAGTACTGCTCCCATCTCTGGGCTGGGGCTCCCAAATACCAGCTTCTTCCATTTGACTCCATACAGAGGAGGGCCGTTCGGATTGTCGATAATCCCATTCTCTCGGATCGTTTGGAGCCTCTGGGTCTGCGGAGGGACTTCGGTTCCCTCTGTATTTTGTACCGTATGTTCCATGGGGAGTGCTCTGAGGAATTGTTCGAGATGATACCAGCATCTCGTTTTTACCATCGCACCGCCCGCCACCGGAGTAGAGTTCATCCATACTACCTGGAGCCACTGCGATCATCCACAGTGCGTTTCCAGAGATCTTTTTTGCCACGTACCATCCGGCTATGGAATGAGCTCCCCTCCACGGTGTTTCCCGAGCGCTATGACATGTCCTTCTTCAAACGAGGCTTGTGGAGAGTATTAAGCGGTAGGCAGCGGCTTGGCTCTGCCCCTGGCATTGCTGAAGTCCATGGGCGACGGTAA
Protein
MAWYRHISAPDDTSYLEYPGYVLEHNFLRKAGVCVFVRADVCCRRLRGLEQRDLSLLWLRVDHGGRSRIYACLYRSHSSDAGSALFEHVQEGTNRVLEQYPSAEVVVLGDFNAHHQEWLGSRTTDLPGRTAYDFALAYGFSQLVTQPTRVPNIEGHEPSLLDLLLTTDPAGYSVVVDAPLGSSDHCLIRAAVPLSRPDRRTTTGYRRVWRYMSADWDGLREFYAFYPWGRFCFSSADPDVCADRLKDVVLQGMELFIPSSEVPVGGRSRPWYNNASRDAAHLKRSAYVAWDNARRRRDPNISGERRKYNAASRSYKKVIARAKSEHVARIGERLKSYPSGSRAFWSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNILRCDSSLPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCTNRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDSQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDVAKAFDRVWHRALLSKLPSYGIPEGLCKFGALPHLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSELENYLGRVSEWGELNLVQFNPIKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRPRMEYCSHLWAGAPKYQLLPFDSIQRRAVRIVDNPILSDRLEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR
Summary
Uniprot
EMBL
AY359886
AAQ57129.1
RSAL01000041
RVE50934.1
RSAL01000090
RVE48098.1
+ More
RSAL01000422 RVE41792.1 DPOC01000269 HCX22453.1 HAAD01000593 CDG66825.1 GDRN01111334 JAI56796.1 GDRN01111277 JAI56804.1 GDRN01111278 JAI56803.1 GDRN01111326 JAI56798.1 NSIT01000234 PJE78200.1 NSIT01000225 PJE78229.1 AAGJ04060226
RSAL01000422 RVE41792.1 DPOC01000269 HCX22453.1 HAAD01000593 CDG66825.1 GDRN01111334 JAI56796.1 GDRN01111277 JAI56804.1 GDRN01111278 JAI56803.1 GDRN01111326 JAI56798.1 NSIT01000234 PJE78200.1 NSIT01000225 PJE78229.1 AAGJ04060226
Proteomes
PRIDE
Pfam
Interpro
IPR000477
RT_dom
+ More
IPR005135 Endo/exonuclease/phosphatase
IPR036691 Endo/exonu/phosph_ase_sf
IPR000832 GPCR_2_secretin-like
IPR017981 GPCR_2-like
IPR007023 Ribosom_reg
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR000504 RRM_dom
IPR034653 SPF45_RRM
IPR003954 RRM_dom_euk
IPR000467 G_patch_dom
IPR040052 RBM17
IPR035979 RBD_domain_sf
IPR030223 Dispatched
IPR003392 Ptc/Disp
IPR000731 SSD
IPR013087 Znf_C2H2_type
IPR036236 Znf_C2H2_sf
IPR005135 Endo/exonuclease/phosphatase
IPR036691 Endo/exonu/phosph_ase_sf
IPR000832 GPCR_2_secretin-like
IPR017981 GPCR_2-like
IPR007023 Ribosom_reg
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR000504 RRM_dom
IPR034653 SPF45_RRM
IPR003954 RRM_dom_euk
IPR000467 G_patch_dom
IPR040052 RBM17
IPR035979 RBD_domain_sf
IPR030223 Dispatched
IPR003392 Ptc/Disp
IPR000731 SSD
IPR013087 Znf_C2H2_type
IPR036236 Znf_C2H2_sf
Gene 3D
ProteinModelPortal
PDB
6AR3
E-value=0.0335976,
Score=91
Ontologies
PANTHER
Topology
Length:
907
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00524
Exp number, first 60 AAs:
0.00022
Total prob of N-in:
0.00007
outside
1 - 907
Population Genetic Test Statistics
Pi
166.202796
Theta
131.305912
Tajima's D
1.06414
CLR
0.786133
CSRT
0.683765811709415
Interpretation
Uncertain
