Silkworm Genome Informatics Database

Gene

KWMTBOMO05878

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106708942_[Papilio_machaon]

Location

Bomo_Chr10(+):13196931-13202707 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.064 Nuclear Reliability : 1.655

CDS

ATGGCCAGTTTAAAAAAGTTATTACCCCAGGAGGGTACCTCCCGCTCAGCGGGAGGAGAATCCCTCCGTGTGGCCGACTCGTCGGACGCACGCTGCCCCACGTATTCTGGGGGGGGCAAAAACTGCCTAGACGTCAGGTCCGGGAAGGACGGAGTTCAAAAGAAGAAAATTATGTCCGAGAAGGACCCTGAAGTAAGCTCCTTAAGAGCCGATGTCGTGTCGGACAACGATATGGCCACAGTTGGTTCGGCCCAGTCGTCGACCCATTCGTCGCCCACACGACGACGGCGGAAAAGGGTGCTCAATATAAGCTCGGACGGGCTGAGTAGCAGCTCCGGCTCGGAGGCTCAGGATCCGACAGGTGTGAAGCCCAGAGCAGTCACGCCGTCAAAGCGTGGACGGGGACGCCCTGCGACCACAGGGCAGTACGTTGGCATGGCCGCTGCCAGGCAAGCGTACCTCAAGGCACAAAAAGAGGAGAAGGAGCTCACTGAGAGCGCGCGCACCACACGCCACAAGAGGAGAGTGGCTGAAGGGTCTGTCCCTAAGCCCGATGCCGAGCGTAGGCTCCATCAAAGTGCAGAGGTGGCCCTGATGGTCGCCGCCAAATCCAGCAGCCCGAAGGGCACGTACGTGCGTGCACTGAAGGAGTTGGCAGTCACTGTCAAGGAGGCCACGGAGGACCTTGTGGGCTACACCGCAGCCGAAGAGGCTAAGAGACTGCGAGCGGTCAACGTCAAGCAGGAGCAGGAGATCCTGCAACTGCGTAAGGAGCTCGATGAAGTTAGAAGGGAGTTGGCGAGGGTTTCGCAGGTGCTAGCGTTGCCCACATCGACTGCGACCCCGGCCCCGAACACCAAGGAGGAAGAGGAGGAGTTGCGCCTACAGCGCATTATGCGAGCTGTCGGCACTATGCTCGACGCTCGCTTTGAAGGGCTGGAGGCACGGCTTCTACCGGAGCCCCGAATGCGACCACCGCTAGCGGCGGACAAGCAGAGGAGCCGGGAAGAATCGTCTAATCCCCCTGTCGTCGTTGACGCTGCACCGGATGCGGCACCGTCATCAGTGCCACCGATGACATTGGCGAAAAAGAGGATGCGTGGCCCCAAGAGAAGTGTCACCGCGCAAGCGGCTTCATCCGAAACGCACACCTTCCTCCCGGCTCCAGCTTCTATGATCGAGAGCTGGTCAACGGTCACCCGTAGGGGTGCTCGACCGAGGGAGGAAGCAGTGAGGACAGTTCCAGCGGCAGCTATCGCTGAAGCGGAAAGGAAAGATCGGTCTTCTGTAAAGAGGAAAGAGAAGAAGCTGCGCCCTCCACGCACTCAGGCCGTTGTCCTCAAGCTGCAACCAGAGGCCGTGGAAAGAGGACTCACGTACCGCACTGTACTCGCCGAAGCGAGGGCCAAGGTAGATCCTGGGGCACTTGGAATACCCATCCAGCGCATCCGGTCTGCAGTGACTGGGTCTAAGGTGCTGGTAGTGGAAGGTGCAGACCAGAGCGCCAAGGCCGATCTCCTGGCCCAAAAGCTTCGTGAGGTTCTGCCCGCAGAAGGGGTCATAGTGACCAGGCCAGTAACGACTGCAGCCATCCGCATCAGCGGACTGGACGACTCCCTGATGCCGGAGGAACTTACCGCGGAGCTTGCCCGGATTGGCGAATGCGCTCCTGATGCGGTGAAGATCGGAGACATCAAGTATGGCCCAGGCGGGATGGGTCAAGTATTGGTCCGGTTGCCCGTCGTTGCCACGATGAAGGTTCTCGCCGTTCCAAAACTGAGGGTTGGTTGGAGCGTGCTCCGCGCTTGTTTGTTAGAGGCTAAGAAGCTACAGTGCTTCCGATGCCATGAGCTAGGGCACGTGAGCGCCCGATGTCCTTCGTCGGTCGACCGCAGCCGGGATTGTTATCGGTGCGGCCAGACCGGCCACGTAGCGGCCGACTGCTCTCTTGCACCACACTGCGCTGGGAATCTCAACCATTGCGCCAGAGCTCAGGACCTTTTGTTCCAGAGCATGGCGGAGGGGTTGACCCATCTTGCGGTGGTCGCCGAGCCGTATCGGGTCCCTTCGAGCCCCGATTGGGCGGCCGATTTGGAGGGCCGAGTGGCAATCATCCGGCGTTGTTGTGTGGGTGCTCCGCCTACGTTTGCCGTTGTTGAAAGAGGTCGCGGCTTCGTTGCCGTTCTCTGGGCCGAGATATTCGTGTTGGGAGTGTACTTTTCCCCAAACAGGACGCTCGCCGAGTTTGAGGTTTTCCTCAGCGAGCTCAGCCGCGTCGTTGGAAGGTCGCACTTCCGACGGATTCTCGTTCTAGGTGACCTAAATGCCAAGTCATTGTCTTGGGGTTCCTCTAGGACGTGCCCCAGAGGTAGAGCGGTGGAGGAGTGGCTGGTCGGAAGCGGTCTCCTCATCCTCAATCGCGGTACGGAACTCACATGCGTGCGACGTTTGGGCGGATCCGTGGTGGACGTTACATTCGCCACGCCTGACGTCGCATATCGCGTACGCGGTTGGGCGGTGATGGTTGGCGAGGAGACCCTCTCCGACCACCGTTACATCCGATTCAGTGTCGCCGCGACCCCGGTGGGTTCTGTTCGGGGCTTTTCCTTGCCCATCAGTGGCAGCGCTAGGGGTCCTCGTTGGGCCCAGAAGCGCCTCAACATCGAGCGGTTGCGTGAGGCGGCCATAGTGCAGGCGTGGCGTCTTGACTCGCTTGGCGAGCCAGCAGACGTGTGCGAGGGGGTGGAGCGTCTGCGCGAGGCAATGTCACGGGTGTGTGACGCTGCTATGCCTCGCGTGAGAGCTCTCGCTCCTAAGCGCCAAGTTCATTGGTGGACCGAGGAGATCGCCAGCCAGCGCCGGCTATGCGATATTAGTCGTCGCACATACCAGCGATATCGACGACGAAGAACGCGCCGGGACCCCAACGAGGAGGACCGCCTGTACGAAGTGTACAGGACGGCGATAAGAACCCTGCGCTTGGCTATCGGGGAGGCGAAGGAGGCCGCCTGGAACGACCTACTGGCCTCGCTGGACCGTGACCCGTGGGGGCGGCCCTACAGGCTGGCGCGTAATGCGCTTCGCCGTTGGGCTCCTCCCGCAACCAGCACCCTGCCGCCGGAAACATTGCAGCGGGTAGTCGGGGGTCTGTTTCCCGATTTATCCGGGACGGCCTTCGTCCCCCCTGTGATGACAATGGCGCGGATTGCTGATAGCGAAGAGCTTGAGGACGTCTCCCAGGTGGAGTTCGATTTGGCTGTGCAGAGGATGGATCTCGTCCCAAGCGTGGGCGCTCGCCTTGACAGGTGCCTCCGTGAGGGCAGGTTCCCAGAGCCATGGAAGACTGGTCGGCTTGTCCTTATTCCTAAGGAAGGCCGGCCACGTGACGAGCCAAGCGGGTACCGCCCAATCGTCGTGCTGGACGAGGCTGGTAAGCTCCTCGAGCGCATCGTCGCCAGTCGCCTCGTCCAGCACCTCGAAAGCGTTGGGCCTGACCTGGCTCCTAACCAATATGGTTTCCGGAGAGGTCGCTCCACCATGGACGCGGTCTTGCGCGTCCGCCACCTCTCCCATCGTGCGTGCTCCGAGGGGGGCGTGTTGTTGGCTGTGTCGATTGATATCGCCAACGCCTTCAACACGATCCCTTGGAGCACGATCGTGGAATCGCTCCGGTTTCACCACGTCCCCCCTAGTCTCCGGACCCTGATAGAGGATTACCTCTCAGGGCGAAATGTAGTCTTCCCCGAGAGGAGGGGGTGGGGACGGAAAGCGGTGTCGTGCGGGGTCCCGCAGGGGTCGGTACTGGGACCACTCCTGTGGGACATCGGTTTCGACTGGGTCCTGCGCGGTGCTAGCCTGCGTGGCGTCGACGTAGTGTGCTATGCCGACGACACGCTGGTGACGGCCCGCGGAGCCGACTACAGAGCCGCAGCGATCCTTGCGACGGCGGCGGTCTCCACCGTCGTTAGTCGCATTCGGAGATTAGGTCTTGAGGTGGCCCTCCGCAAGTCCGAAGCGGTGTGCTTTCACCCAGTCCGGAGGGGACCTCCTCCGGGAGCGAATCTCATAGTCGGCGGAGTATCGATCGCTGTCCAGCCGAAGCTCAAATATTTGGGCCTTGTGCTGGACAGTCGATGGCGCTTCGACCACCACTTTGGTGAGTTAGTCCCGAAGCTGCTGGGGATGGCGGGCGCACTAGCCCGTCTTCTCCCCAACGTCGGTGGTTGCAGCGCCGGCGTCCGGCGTCTGTACCTGGGGGTCGTGCGCAGTATGGCTTTGTACGGCGCTCCCGTGTGGTCGCCCGCACTCTCTGCGCGCAATGCAGCTTTGCTGCTACGAGCGCAACGGGTGCTCGCGGTGAGAGTCATCAGGGGGTACCGTACGATCTCCCGGGAGGTCGCCTGCGCCCTCGCCGGTTCCCTTCCTTGGGATCTCGAGGCTGAGGTAGCAGCTGCGGTATACCGGCGCAGAACACAGTCCCTGAGTCGGGGACGGACGCCCGGCCCGTCGGCTGTCGGTCGGTGGAGGCGTGCTGCGCGTCATCTGGCGTACGCCAAGTGGAGGGAGCGGTTGCTGGAGGAGCTTGGCCAAACTTCAGTCACTCGCCGACGCACCCTCGAGGCCCTGGTGCCCGTGCTGGAGGCATGGTCAGATAGACGACACGGCGTGCTCTCCTTCCACTTAACGCAGGTCCTCTCGGGGCATGGTTGCTTCGGGAGGTACCTGTGGAAGGTCTGCAGGAGAGAGCCACATCCGGGTTGCCACCAGTGCGGGCATCCGGACGATGACGCTCAGCATGCACTCGAAGCGTGCCCGCGTTGGGAGCGCTCGCGGCGAGACCTCATCGCGGTGCTGGGGAGAGACCTCTCCTTGCGGGCTGTCATCGCCCGCATGCTAGAGGACCAGAATTCTTGGGAGGCCATGACCAGGTTTTGCGACCTGGTCATGGCGTTCCGTGAGGCTGAGGAGCGCGAAAGGGAGTGGGATCCCTCTTCGGCTTCACAGCGAAGAAGGCGGAGTGGGCGGCACGGGCGCGAAGCTCCCGTTCATCTCCCGTAG

Protein

MASLKKLLPQEGTSRSAGGESLRVADSSDARCPTYSGGGKNCLDVRSGKDGVQKKKIMSEKDPEVSSLRADVVSDNDMATVGSAQSSTHSSPTRRRRKRVLNISSDGLSSSSGSEAQDPTGVKPRAVTPSKRGRGRPATTGQYVGMAAARQAYLKAQKEEKELTESARTTRHKRRVAEGSVPKPDAERRLHQSAEVALMVAAKSSSPKGTYVRALKELAVTVKEATEDLVGYTAAEEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVLALPTSTATPAPNTKEEEEELRLQRIMRAVGTMLDARFEGLEARLLPEPRMRPPLAADKQRSREESSNPPVVVDAAPDAAPSSVPPMTLAKKRMRGPKRSVTAQAASSETHTFLPAPASMIESWSTVTRRGARPREEAVRTVPAAAIAEAERKDRSSVKRKEKKLRPPRTQAVVLKLQPEAVERGLTYRTVLAEARAKVDPGALGIPIQRIRSAVTGSKVLVVEGADQSAKADLLAQKLREVLPAEGVIVTRPVTTAAIRISGLDDSLMPEELTAELARIGECAPDAVKIGDIKYGPGGMGQVLVRLPVVATMKVLAVPKLRVGWSVLRACLLEAKKLQCFRCHELGHVSARCPSSVDRSRDCYRCGQTGHVAADCSLAPHCAGNLNHCARAQDLLFQSMAEGLTHLAVVAEPYRVPSSPDWAADLEGRVAIIRRCCVGAPPTFAVVERGRGFVAVLWAEIFVLGVYFSPNRTLAEFEVFLSELSRVVGRSHFRRILVLGDLNAKSLSWGSSRTCPRGRAVEEWLVGSGLLILNRGTELTCVRRLGGSVVDVTFATPDVAYRVRGWAVMVGEETLSDHRYIRFSVAATPVGSVRGFSLPISGSARGPRWAQKRLNIERLREAAIVQAWRLDSLGEPADVCEGVERLREAMSRVCDAAMPRVRALAPKRQVHWWTEEIASQRRLCDISRRTYQRYRRRRTRRDPNEEDRLYEVYRTAIRTLRLAIGEAKEAAWNDLLASLDRDPWGRPYRLARNALRRWAPPATSTLPPETLQRVVGGLFPDLSGTAFVPPVMTMARIADSEELEDVSQVEFDLAVQRMDLVPSVGARLDRCLREGRFPEPWKTGRLVLIPKEGRPRDEPSGYRPIVVLDEAGKLLERIVASRLVQHLESVGPDLAPNQYGFRRGRSTMDAVLRVRHLSHRACSEGGVLLAVSIDIANAFNTIPWSTIVESLRFHHVPPSLRTLIEDYLSGRNVVFPERRGWGRKAVSCGVPQGSVLGPLLWDIGFDWVLRGASLRGVDVVCYADDTLVTARGADYRAAAILATAAVSTVVSRIRRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSIAVQPKLKYLGLVLDSRWRFDHHFGELVPKLLGMAGALARLLPNVGGCSAGVRRLYLGVVRSMALYGAPVWSPALSARNAALLLRAQRVLAVRVIRGYRTISREVACALAGSLPWDLEAEVAAAVYRRRTQSLSRGRTPGPSAVGRWRRAARHLAYAKWRERLLEELGQTSVTRRRTLEALVPVLEAWSDRRHGVLSFHLTQVLSGHGCFGRYLWKVCRREPHPGCHQCGHPDDDAQHALEACPRWERSRRDLIAVLGRDLSLRAVIARMLEDQNSWEAMTRFCDLVMAFREAEEREREWDPSSASQRRRRSGRHGREAPVHLP

Uniprot

A0A0J7KQK3 A0A0J7NFZ0 A0A0J7KRB8 A0A0J7KIS5 J9KJG8 X1WJY4 + More
J9KM84 X1WZ64 A0A139WAH4 A0A139WNC9 A0A139WN93 J9JY94 X1WXT5 J9KWM9 J9KNS1 J9K6F0 J9KPP8

Pubmed

18362917 19820115

EMBL

LBMM01004272 KMQ92618.1 LBMM01005474 KMQ91485.1 LBMM01003988 KMQ92922.1 + More
LBMM01006977 KMQ90149.1 ABLF02041886 ABLF02011238 ABLF02018942 ABLF02041885 ABLF02011183 ABLF02041884 KQ971388 KYB24913.1 KQ971310 KYB29500.1 KYB29499.1 ABLF02007989 ABLF02004854 ABLF02041317 ABLF02011927 ABLF02018808 ABLF02012448 ABLF02012450 ABLF02012455 ABLF02012460 ABLF02009991 ABLF02009992 ABLF02054952

Proteomes

UP000036403 UP000007819 UP000007266

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF00098   zf-CCHC

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf
IPR036691   Endo/exonu/phosph_ase_sf
IPR005135   Endo/exonuclease/phosphatase
IPR000477   RT_dom

SUPFAM

SSF56219 SSF56219 + More
SSF57756 SSF57756

Gene 3D

3.60.10.10

ProteinModelPortal

A0A0J7KQK3 A0A0J7NFZ0 A0A0J7KRB8 A0A0J7KIS5 J9KJG8 X1WJY4 + More
J9KM84 X1WZ64 A0A139WAH4 A0A139WNC9 A0A139WN93 J9JY94 X1WXT5 J9KWM9 J9KNS1 J9K6F0 J9KPP8

PDB

1WDU E-value=6.44198e-08, Score=142

KEGG

105842185 no KO assigned | (RefSeq) uncharacterized LOC105842185

GO

GO:0008270 GO:0003676 GO:0003964 GO:0016021 GO:0004517 GO:0006809 GO:0005506 GO:0005516 GO:0020037 GO:0050660 GO:0050661 GO:0016597

Length:

1685

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04968

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1 - 1685

Pi

0

Theta

0

Tajima's D

0

CLR

0.533012

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree