Silkworm Genome Informatics Database

Gene

KWMTBOMO05873 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002940

Annotation

PREDICTED:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

Location

Bomo_Chr10(-):13043682-13075960 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.455

CDS

ATGGAGTCGTGGAAAGGAAAAATTGTGCTTATCACTGGTGCCGCAAGCGGTATCGGCGAAGGAGTGGTCCGGCTTATATTGGAGCGAGGTGTCAAGCATGTTGCTATTTTGGATGTTGCCGAGGATTCCGGAAGAGCTCTCGAGAATGAGCTCAATACAAAATACGGTCCCAACTGTGTGAAGTTCTACAAATGTGACGTAACCGTCGAAGAACTTTTTCTGGAATTATTCGATACTGTCAAAAACGAACAAGGCTATCTTGATGTGGTCATCAACAATGCCGCGATCATGAACGACAGCTATAAATCTTACAAAAAACAAATCGATATAAATGTGACTGCTTTAGTTACTGGTACACTGAAAGCTATAGAGATTATGGGAAAGCAGAATGGCGGTAAAGGAGGTACTGTTCTAAATATATCTTCAGTGGCAGCGTTATGTCAATCTCATCTGTTCCCGATTTATTTCGGGACCAAGAGTGCGGTGCTGCAGTTCAGCAACTGTATTGGGTTAGAAGAACATTACGCTAAAAGCGGCGTCCGAGTACTGAGTATTTGCTTTGGCGCGACTGATACTCCACTATTGAACGGAACTAAACTAGGCAGCTTTGATGAAGAAATAGACGGCACTTGTGTTGAGGCCATCCAAAAGAATTATCCTATTCAAAAGATGGAATCTGCAGCCAAAGGTCTGGTCGAGGCCTATGAGCATGCTAAAAGTGGCGACACTTGGATCATCACAACAAACAAACCGGCAAAGAACATCACTGATACATATGAAAAGCGTGGGGGAGAGCACCGAACCTTGTGGAACACCAGCGTTGATGGTCATGGTATCGGAGCAGCAGCCGTCGACGACAACTGCGATGCTCCGTCCATCCAAAAAGCTAGCGATCCACTTGCAGAGTCCCTCAGGGATCCCCCTCTTGCATTGAATACATTAAAAATAATCATGACATATGACTGGAAAGATAAAGTTGTTCTGATTACTGGAGGGGGCAATGGGATCGGATCTCATGTAGTCAGGATTGCACTCGAGGAAGGGGCAAAGGAAATTAATATATTGGACATCAACGAAGCAAACGCGAAATCGCTTCAAGACGAACTGAACGCCAAACACGGAGTTGGAAAAGTGAAATTCATTAAATGCGATGTTGCTAATCACGAAAGCCTAGTGGCAGCCTTCGAAGCTATTTTATCGGACAAAAACAACGAATATGTTGTTCTCAACAACGCTGCTATACTAAATGACAGCTTGAAGACCTACAGAAAACAAATCGATATTAATGTGGCCGCTGTGATCACTGGCTCATTAAAAGCCCTTGATTTGATGAGGAAAAACAAAGGGGGCAAAGGTGGCGCTATAATCAATATGTCTTCAATTGCAGCTCTTTGTCCATTACCTTTTACACCCATTTACAATGCCACTAAGAGTGCCGTGATGCAGTTTAGTGTATGTTTGGGCGCAGACGATTACTACTCGAGGACTGGAGTTCGTGTATTAACTATGTGTTTCGGTGCGACAGATACTAGTCTTATTGCGATTGAGAACATGGGAAGTTTCGATGAAGTTATAGAAACCAAACTCGGTGAACCTTTAAAGTTATATCCCGGACAAAAGATTGAATCCGCCGCTAGGGCAGTTATAGATGCTTATAAACAAGGATCTAGTGGCAGTATTTGGCTGGCCAATGCTAACAAGGCAGCTGAAGACATCACGCACTTTATTGCAATTTTGGACACAGATGTCGAAGCGAGTGAAATGCTTCAGGATAAAATGATGACTGAATATGTTAATTCTAAAGTAAAATTCATAGAGTGTGACGTCACTGTCAATGAAGAACTTTTTGGGATTGTCAAAGAAATCGGATATATTGATCTAGTTATTAATAATGCTGGGATAGCCAATGAATCAGATCCAAAAGCAATAAGAAAAGAAGTTGAGGTTAATTACAGGGAAGAATATTACAGTAAAACAGGAGTGCGCATTCTAACTGTGTGCTTTGGAATCACGAAAACTGGCATTTACAACAACCTGAGAAGTTTTGATGAAAACATTAACAAAGATATGCAACAGATTATAGATTTATATCCCATGCAGTCAAAAGAGTCAGCAGTCAAAGGTGGGATAGAAGCAATCAAGAAAGGTGAAAGGGGTAGCACCTGGCTCGTAGCTAAAGATAACCCAGTGGTCGATGTCACATCAAATCATGTTGCTGTTTTGGATGTTGCCGAGGATTGCGGAAGAGCTCTTGAGAATGAGCTCAATACAAAATACGGTCCCAACAGTGTGAAGTTCTACAAATGTGACGTAACTGACGAAGAACTTTTTCTGGAATTATTCGATACTGTCAAAAACGAACAAGGCTATCTTGATGTGGTCATCAACAATGCCGCGATCATGAACGACAGCTATAAATCTTACAAAAAACAAATCGATATAAATGTGACTGCTTTAGTTACTGGTACACTGAAAGCTATAGAGATTATGGGAAAGCAGAATGGCGGTAAAGGAGGTACTGTTCTAAATATATCTTCAGTGGCGGCGTTATGTCAATCTCATCTGTTCCCGATTTATTTCGGGACCAAGAGTGCGGTGCTGCAGTTCAGCAACTGTATTGGGTTAGAAGAACATTACGCTAAAAGCGGCGTCAGAGTACTGAGTATTTGCTTTGGCGCGACTGATACTCCACTATTGAGCGGAACTAAACTAGGCAGCTTTGATGAAGAAATAGACGACACTTGTGCCGATTTCATCAAAAAGAAATATCTATTGCAAAAGATGGAATCTGCAGCCAAAGGTCTGGTCGAGGCCTATGAGCACGCTAAAAGTGGCGAAACTTGGATCATCACAAAAAACAAACCGGCGAAGAACATCACTGATACAATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTCAAAATTTTAACATACTGAAAAATTTGAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCTCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACAAGAGAGCTACAACAAACAAAATGATAAGGTGTATGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCATGTCCAGCGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTATGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGTGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCGCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATTACGGAGGTCGTTTTGAATAA

Protein

MESWKGKIVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRALENELNTKYGPNCVKFYKCDVTVEELFLELFDTVKNEQGYLDVVINNAAIMNDSYKSYKKQIDINVTALVTGTLKAIEIMGKQNGGKGGTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTPLLNGTKLGSFDEEIDGTCVEAIQKNYPIQKMESAAKGLVEAYEHAKSGDTWIITTNKPAKNITDTYEKRGGEHRTLWNTSVDGHGIGAAAVDDNCDAPSIQKASDPLAESLRDPPLALNTLKIIMTYDWKDKVVLITGGGNGIGSHVVRIALEEGAKEINILDINEANAKSLQDELNAKHGVGKVKFIKCDVANHESLVAAFEAILSDKNNEYVVLNNAAILNDSLKTYRKQIDINVAAVITGSLKALDLMRKNKGGKGGAIINMSSIAALCPLPFTPIYNATKSAVMQFSVCLGADDYYSRTGVRVLTMCFGATDTSLIAIENMGSFDEVIETKLGEPLKLYPGQKIESAARAVIDAYKQGSSGSIWLANANKAAEDITHFIAILDTDVEASEMLQDKMMTEYVNSKVKFIECDVTVNEELFGIVKEIGYIDLVINNAGIANESDPKAIRKEVEVNYREEYYSKTGVRILTVCFGITKTGIYNNLRSFDENINKDMQQIIDLYPMQSKESAVKGGIEAIKKGERGSTWLVAKDNPVVDVTSNHVAVLDVAEDCGRALENELNTKYGPNSVKFYKCDVTDEELFLELFDTVKNEQGYLDVVINNAAIMNDSYKSYKKQIDINVTALVTGTLKAIEIMGKQNGGKGGTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTPLLSGTKLGSFDEEIDDTCADFIKKKYLLQKMESAAKGLVEAYEHAKSGETWIITKNKPAKNITDTMEWTLKEDRVAVIALHRCGYAPIQNFNILKNLNITKRFVYRTIKRYNEDSSVDDRSRSGRSRSVRTPAVIKAVKARIQRNPKQESYNKQNDKVYAHSSEEASNRIPHVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLMEPVSHTMFNNRHWVFQQDSVPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHRNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNYGGRFE

Uniprot

NA

ProteinModelPortal

NA

PDB

2GDZ E-value=2.14948e-28, Score=318

KEGG

105842445 K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) 15-hydroxyprostaglandin

GO

GO:0003677 GO:0016491 GO:0019805 GO:0008270 GO:0005216 GO:0006811 GO:0006541 GO:0016812 GO:0016597

Length:

1233

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.840099999999999

Exp number, first 60 AAs:

0.37748

Total prob of N-in:

0.02960

outside

1 - 1233

Pi

282.418286

Theta

192.361561

Tajima's D

0.9985

CLR

0.797986

CSRT

0.655067246637668

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28556443	IVLITGAASGIGEGVVR	100.00	4e-04
28556443	IVLITGAASGIGEGVVR	100.00	4e-04
28556443	HVAILDVAEDSGR	100.00	4e-04
28556443	IVLITGAASGIGEGVVR	100.00	4e-04
28556443	HVAILDVAEDSGR	100.00	4e-04
28556443	HVAILDVAEDSGR	100.00	4e-04
26280517	SFFEVAGQAR	100.00	0.006
28556443	ALENELNTK	100.00	0.006

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree