Gene

KWMTBOMO05865

Pre Gene Modal

BGIBMGA002945

Annotation

putative_alcohol_dehydrogenase_[Bombyx_mori]

Location

Bomo_Chr10(-):12982854-12989190      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.329

CDS

ATGGCATCGGATTTCGTGAAGCGTTTTGTGGATGTCGATGATAAAGTGTTCTTGGTGACCGGTGGTGCGGCCGGCGTAGGCGCTGGCTTGGTCAAGGCGTTGCTGTTCGAAAACGCACGGCACGTCGCGTTTCTAGATGTCGCTGACCGAGAAGGGGCCGCCCTGGAGGCCCAACTTATAATCAAGTTCGGTGCCTTGAGAGTGAAGTTCATAAAGTGCGACGTAGGAGACGAACGTCAACTCGCTTCTGCATACAAACAAGTGTTGGACAAATACAAAAGGCTTGACGGCGTCATAAACAGCGCTGCAGTACTTAGCGTCGATGATAACTCTTTCAACAGAATGATTGATATCAATTTTACGGGCACAGTGAATAGTACTCTGAAAGCGCTCGATATTATGGGGGCAGATAAAGGCGGTTCTGGCGGTGTTATAGTGAATATATCGTCCCTACTTGCTCTTAATCTCACCAGCCATTTACCTGTTTACGCCGCTACTAAAGCAGCGGTATTACAGTTCAGCATTAGAATGGGCACGCAGGAACAATTTACCCGGACTAAAGTACGGGTATTGTCCGTATGCCTCGGGCCCACTGACACTGCAATCCTTTACAAGAACAACTTAACCAAGTTTGATACAGAGTACGCTCCGTGTTTGTCTTCGCGTGCCCCCGTGAGACAAAGAGTCGAGTCAGCTGTTAAGGGTATTTTGGAGGTGATCAACAAAGCGAGCACCGGAGATACGTGGATCGTGGAAAGCGACAAACCGGCTTACGATTTTACTCAAAATATATCCGAAGCCTTCCAAATACTCTCCAAGACATAG

Protein

MASDFVKRFVDVDDKVFLVTGGAAGVGAGLVKALLFENARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVINSAAVLSVDDNSFNRMIDINFTGTVNSTLKALDIMGADKGGSGGVIVNISSLLALNLTSHLPVYAATKAAVLQFSIRMGTQEQFTRTKVRVLSVCLGPTDTAILYKNNLTKFDTEYAPCLSSRAPVRQRVESAVKGILEVINKASTGDTWIVESDKPAYDFTQNISEAFQILSKT

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J0A9   Q1G151   A0A2W1BJY5   A0A2A4K9E1   A0A2A4KAR2   A0A0H4TY65   + More
A0A194Q851   A0A194QQW0   A0A0L7L646   A0A3S2PLF3   H9J0A4   A0A212F0G1   H9J0A5   A0A3S2LVR9   A0A076FT24   A0A212F0F4   A0A0F6Q4J7   A0A3G1T1B2   A0A1L8D6X2   A0A212F0I1   A0A0L7KXH6   A0A0H4TG49   H9J0A8   A0A212F0G8   A0A2W1BM47   A0A0L7KNH1   A0A194QE27   A0A194QRC6   A0A0L7KNY8   A0A212F0F9   H9J0A6   A0A194Q8J5   A0A3S2NMK6   A0A194QQX1   A0A0N1IPP9   A0A194QA14   A0A2A4JLC0   U5KCB3   Q6RUR3   A0A2H1VGZ5   A0A2H1VH14   A0A140KPR8   R4FLI9   A0A194QFX2   A0A2H1VGZ4   A0A2A4JMY9   E2A713   A0A151X250   E9I9W8   A0A2A4JMW2   A0A195EUB2   A0A195B3G3   A0A195E5P2   F4W475   A0A195CJP6   A0A2H1WWP5   A0A0J7L1B2   A0A026WSD7   A0A158NDP0   E2B6N1   A0A0N0PD11   A0A158NP60   A0A1Y1N8U2   A0A067R8Z3   A0A194QA61   A0A2H1W7D8   A0A1B6DW76   A0A0N0PD56   A0A023F7C3   A0A026WK66   A0A088A4Z7   A0A224XI56   A0A1Y1MAW1   A0A2J7QR46   A0A154PC81   A0A023F7A3   A0A0P4VLL8   A0A1Y1K7W8   N6UG88   A0A0L7QSU5   A0A1W4XDZ2   A0A1W4X358   A0A1L8D6N5   J9JKN0   A0A069DY58   A0A0J7NFD4   A0A154PCJ3   A0A1Y1MP93   A0A1Y1N5U0   U5KC20   R4FM20   A0A069DQG3   A0A1W4XJR9   A0A2H8TFE7  

Pubmed

19121390    28756777    26354079    26227816    22118469    24817326    + More
24053512    20798317    21282665    21719571    24508170    30249741    21347285    28004739    24845553    25474469    27129103    23537049    26334808   

EMBL

BABH01019219    DQ512730    ABF59817.1    KZ149998    PZC75359.1    NWSH01000014    + More
PCG80831.1    PCG80830.1    KP899552    AKQ06151.1    KQ459302    KPJ01717.1    KQ461175    KPJ07893.1    JTDY01002703    KOB70885.1    RSAL01000003    RVE54802.1    BABH01019201    BABH01019202    AGBW02011082    OWR47236.1    BABH01019208    RVE54801.1    KF960797    AII21999.1    OWR47235.1    KP237895    AKD01748.1    MG846919    AXY94771.1    GEYN01000012    JAV02117.1    OWR47240.1    JTDY01004799    KOB67739.1    KP899548    AKQ06147.1    BABH01019210    OWR47239.1    PZC75361.1    JTDY01007968    KOB64832.1    KPJ01716.1    KPJ07894.1    JTDY01007982    KOB64820.1    OWR47238.1    BABH01019209    KPJ01719.1    RVE54803.1    KPJ07892.1    KQ460366    KPJ15603.1    KQ459249    KPJ02363.1    NWSH01001071    PCG72771.1    KC007341    AGQ45606.1    AY491503    AAR84629.1    ODYU01002522    SOQ40120.1    SOQ40118.1    LN794625    CEO43692.1    ACPB03004191    GAHY01001368    JAA76142.1    KPJ02346.1    SOQ40119.1    PCG72772.1    GL437252    EFN70745.1    KQ982585    KYQ54300.1    GL761846    EFZ22664.1    PCG72773.1    KQ981979    KYN31469.1    KQ976625    KYM79033.1    KQ979609    KYN20169.1    GL887491    EGI71071.1    KQ977642    KYN00938.1    ODYU01011579    SOQ57407.1    LBMM01001364    KMQ96441.1    KK107119    QOIP01000009    EZA58571.1    RLU18590.1    ADTU01012731    GL446000    EFN88615.1    KPJ15584.1    ADTU01001531    GEZM01012000    GEZM01011999    GEZM01011998    GEZM01011997    GEZM01011996    GEZM01011995    GEZM01011994    GEZM01011993    JAV93300.1    KK852855    KDR14911.1    KPJ02362.1    ODYU01006680    SOQ48742.1    GEDC01007377    JAS29921.1    KPJ15601.1    GBBI01001567    JAC17145.1    KK107200    QOIP01000002    EZA55494.1    RLU25832.1    GFTR01004259    JAW12167.1    GEZM01036109    GEZM01036108    JAV82969.1    NEVH01011985    PNF31053.1    KQ434870    KZC09506.1    GBBI01001633    JAC17079.1    GDKW01001273    JAI55322.1    GEZM01089353    JAV57529.1    APGK01027734    KB740669    KB632112    ENN79646.1    ERL88916.1    KQ414755    KOC61723.1    GEYN01000013    JAV02116.1    ABLF02032246    ABLF02032258    GBGD01002580    JAC86309.1    LBMM01005734    KMQ91250.1    KZC09507.1    GEZM01028591    JAV86275.1    JAV93302.1    KC007343    AGQ45608.1    ACPB03006965    GAHY01001163    JAA76347.1    GBGD01002581    JAC86308.1    GFXV01001021    MBW12826.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000283053    + More
UP000007151    UP000015103    UP000000311    UP000075809    UP000078541    UP000078540    UP000078492    UP000007755    UP000078542    UP000036403    UP000053097    UP000279307    UP000005205    UP000008237    UP000027135    UP000005203    UP000235965    UP000076502    UP000019118    UP000030742    UP000053825    UP000192223    UP000007819   

PRIDE

H9J0A9    Q1G151    H9J0A4    H9J0A5    H9J0A8    H9J0A6    + More

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J0A9   Q1G151   A0A2W1BJY5   A0A2A4K9E1   A0A2A4KAR2   A0A0H4TY65   + More
A0A194Q851   A0A194QQW0   A0A0L7L646   A0A3S2PLF3   H9J0A4   A0A212F0G1   H9J0A5   A0A3S2LVR9   A0A076FT24   A0A212F0F4   A0A0F6Q4J7   A0A3G1T1B2   A0A1L8D6X2   A0A212F0I1   A0A0L7KXH6   A0A0H4TG49   H9J0A8   A0A212F0G8   A0A2W1BM47   A0A0L7KNH1   A0A194QE27   A0A194QRC6   A0A0L7KNY8   A0A212F0F9   H9J0A6   A0A194Q8J5   A0A3S2NMK6   A0A194QQX1   A0A0N1IPP9   A0A194QA14   A0A2A4JLC0   U5KCB3   Q6RUR3   A0A2H1VGZ5   A0A2H1VH14   A0A140KPR8   R4FLI9   A0A194QFX2   A0A2H1VGZ4   A0A2A4JMY9   E2A713   A0A151X250   E9I9W8   A0A2A4JMW2   A0A195EUB2   A0A195B3G3   A0A195E5P2   F4W475   A0A195CJP6   A0A2H1WWP5   A0A0J7L1B2   A0A026WSD7   A0A158NDP0   E2B6N1   A0A0N0PD11   A0A158NP60   A0A1Y1N8U2   A0A067R8Z3   A0A194QA61   A0A2H1W7D8   A0A1B6DW76   A0A0N0PD56   A0A023F7C3   A0A026WK66   A0A088A4Z7   A0A224XI56   A0A1Y1MAW1   A0A2J7QR46   A0A154PC81   A0A023F7A3   A0A0P4VLL8   A0A1Y1K7W8   N6UG88   A0A0L7QSU5   A0A1W4XDZ2   A0A1W4X358   A0A1L8D6N5   J9JKN0   A0A069DY58   A0A0J7NFD4   A0A154PCJ3   A0A1Y1MP93   A0A1Y1N5U0   U5KC20   R4FM20   A0A069DQG3   A0A1W4XJR9   A0A2H8TFE7  

PDB

2GDZ     E-value=7.86537e-14,     Score=185

KEGG

733056    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) Adh; alcohol dehydrogen

GO

GO:0004022   GO:0016491   GO:0016021   GO:0008152   GO:0019805   GO:0008270   GO:0005216   GO:0006811   GO:0006541   GO:0016812   GO:0016597  

Length:

274

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.61028999999999

Exp number, first 60 AAs:

4.34898

Total prob of N-in:

0.15920

outside

1  -  274

 

 

Pi

280.453263

Theta

172.450752

Tajima's D

2.747161

CLR

0.002732

CSRT

0.965051747412629

Interpretation

Uncertain