SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05863
Pre Gene Modal
BGIBMGA014234
Annotation
PREDICTED:_uncharacterized_protein_LOC101744604_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.871
 

Sequence

CDS
ATGAAGAAATGGTTACAAGAAAAAGAAATTCCATACGATGAAAACATGTTGAAACCCCAGCTTTTTAGCTTGATTAAAGCACATAAGGGACAACACAAAACATACAGCATTGATAAAATTTTATCAAACCACAACCATTCAGTGCTTCGCTTACCTCCATACCATCCAGACCTCAACCCAATTGAAATGGCTTGGGCAGCTATTAAAGGGTATGTCAGTAGCAAAAATGTCAACTGGAGCACTGGCAAAGTAATAGAGCTAGTGAAGGAAAAGGTCGCGGCGATGGGTGCTCCGGAATGGGGTAGATTATGTCAAAAGATAAAAGAGATTGAGGCGGAGTATGTAAAAAGTGATCATGTGGTAGATTTAGTCACTGATGAGTTTGTAATTTTTGCTGACGATGATTGCGACACGGATGAAGAAAGTAGTGATGATGATGATGGTCATGATTATGATAGCGAAAAAACAATTACAAATACCAGCTCAGCTTCAGCTGATCCAAGACCTGGCACCAGCTCTAGTTTTGACCTAATGGAAGGAATATCTATTTTACCCCTAGATTAA
Protein
MKKWLQEKEIPYDENMLKPQLFSLIKAHKGQHKTYSIDKILSNHNHSVLRLPPYHPDLNPIEMAWAAIKGYVSSKNVNWSTGKVIELVKEKVAAMGAPEWGRLCQKIKEIEAEYVKSDHVVDLVTDEFVIFADDDCDTDEESSDDDDGHDYDSEKTITNTSSASADPRPGTSSSFDLMEGISILPLD

Summary

Pfam
PF13358   DDE_3
Interpro
IPR038717   Tc1-like_DDE_dom       
PDB
5CR4     E-value=0.0499408,     Score=81

Ontologies

GO

Topology

Length:
187
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
1e-05
Total prob of N-in:
0.20601
outside
1  -  187
 
 

Population Genetic Test Statistics

Pi
348.238899
Theta
193.59221
Tajima's D
2.514112
CLR
0.836608
CSRT
0.945602719864007
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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