SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05861
Pre Gene Modal
BGIBMGA006893
Annotation
cathepsin_L_like_protein_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 0.943
 

Sequence

CDS
ATGAATCGGTTTTGGTTGTTAATATTCGGCCTGCCCTTCGTGGCGGCAGCGACAATAGACTTGAAAGACGAACCTCTAGATTGGCCTGAAACATACCATTTCGAAGCCGTCAGGATGTCAATTAGTGCCGGCAACGTACAAGACTACTCAGTATGGAAAACAAATCATTCGTCACGCGTCGACTACAACAAAGGAGCTGTGAAAAGTATTATCGTAGATGAAAACGCAAAATACAGATACGGAGTCTCATATGAGATCCACCCAGAAACTGACGATGGTGAAGATGCGATTTTCAAGTGTAATGTAATGCTTGGATCTGAAGATAATATATTCGACTTAAAGATTATCTTGCCAGAAACCGACAACTTTGAATACGTCGGACCAGATTCACAAACCGTTGAAAACACTATCAAGTTCGTCGCTGAAGATAGCGATTTGGAGACTAAGACAATAAAGACTATTTGGGCTACCTATGACGAGAAAAACAATAATTGGCATCCAGTCAGCACAACTAAACGCCTGAACCATGAGATGGCGTTAGTCGGCTACGGTGAACGCGACGGCGACACCTATTGGATCATCAAAAACTCCTGGGGCCCCGACTGGGGAGTCGAAGGATACTTGCTGATTTCATCCCGTAACAACAACTGCGGTATCGCAACAGAACCAACTTACGTAGTCTACTAA
Protein
MNRFWLLIFGLPFVAAATIDLKDEPLDWPETYHFEAVRMSISAGNVQDYSVWKTNHSSRVDYNKGAVKSIIVDENAKYRYGVSYEIHPETDDGEDAIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWHPVSTTKRLNHEMALVGYGERDGDTYWIIKNSWGPDWGVEGYLLISSRNNNCGIATEPTYVVY

Summary

Similarity
Belongs to the peptidase C1 family.
Pfam
PF00112   Peptidase_C1        + More
PF08246   Inhibitor_I29
Interpro
IPR038765   Papain-like_cys_pep_sf        + More
IPR025660   Pept_his_AS       
IPR025661   Pept_asp_AS       
IPR000668   Peptidase_C1A_C       
IPR039417   Peptidase_C1A_papain-like       
IPR013201   Prot_inhib_I29       
IPR000169   Pept_cys_AS       
SUPFAM
SSF54001   SSF54001       
PDB
6CZK     E-value=5.68226e-13,     Score=177

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.996720
 
 
Length:
228
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.36371
Exp number, first 60 AAs:
0.36358
Total prob of N-in:
0.03174
outside
1  -  228
 
 

Population Genetic Test Statistics

Pi
249.942199
Theta
20.646906
Tajima's D
-1.137137
CLR
112.601615
CSRT
0.114144292785361
Interpretation
Uncertain
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