Gene

KWMTBOMO05857  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006895

Annotation

PREDICTED:_uncharacterized_protein_LOC106718385_[Papilio_machaon]

Location

Bomo_Chr10(-):12612148-12613645      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.136 PlasmaMembrane   Reliability : 1.048

CDS

ATGTATGGCGGAGTGTGCGTGGAAGCAGCGCTTCACTTGAGACACGCGCTGGCTCTGAAGCCGGACTTCGAGCCAGCGCTCGCCGCACTCAAAGATATCGAGAATATACCGGAGGCTTCGGTTCACGTGTACACATTACTCATCATTATTTGTTTGGTAATGGGTGTACTGCTAGTGATATTGTCGTCGGTGGACAGCGGCACCGACACGGAGGAGCCCAAGACGCAGAGACATTTTAACCGAGCGATGGCGATGCGATCTCTCCGAGGCGTCGCCTTCTCCGGCTCGAGACGGAAGAAAGGCGGATCCTAA

Protein

MYGGVCVEAALHLRHALALKPDFEPALAALKDIENIPEASVHVYTLLIIICLVMGVLLVILSSVDSGTDTEEPKTQRHFNRAMAMRSLRGVAFSGSRRKKGGS

Uniprot

A0A194QWE1   A0A1E1WCU9   A0A194Q8K0   L7X3T5   A0A212ETP4   A0A1W4W2L2   + More
E0VG00   A0A1Y1LW23   A0A2P8XQ71   A0A1B6HU72   A0A1B6CW60   A0A1B6EXJ5   A0A1B6KH30   A0A1B6M1C5   A0A2J7PJJ0   A0A067RB78   A0A1B6DAN3   A0A139WBW0   D6X1D3   A0A182M3E6   W5J840   A0A2M4AQ78   A0A182T7Y3   A0A182Y7R7   A0A182JZ39   A0A1S4G986   A0A182V1R8   A0A182MZJ5   A0A182XDZ6   A0A182UJJ3   A0A182HGM7   A0A182PFV6   A0A182QJM7   A0A2M4BQL0   A0A2M4BQA6   A0A2M4BQI1   T1I3J5   A0A224XEH6   A0A069DYS8   A0A232EPK0   A0A0A9Z1X8   K7ITE6   A0A026WT09   A0A3L8DHI5   A0A182W4I1   E2BXA7   W8B737   A0A182RH77   T1G1U3   A0A0J7KZT4   A0A2A3ED17   V9IMA5   A0A088A790   A0A034WJL8   A0A0K8UVK7   A0A182IKB8   A0A182F9W4   A0A154PMC5   A0A0N0U2N3   A0A084WFH1   E2AAP5   A0A0B7A5H3   E9IZ96   A0A0L7QNJ1   A0A2C9JEL9   F4WUY4   A0A151JCJ8   A0A195ATV6   A0A195FX42   A0A151WW58   A0A1A9UHX7   A0A195CXJ4   A0A1B0G5L8   A0A1A9Y8M7   A0A1B0BPE9   A0A1A9W940   A0A1J1HW16   A0A0L0BL46  

Pubmed

26354079    23674305    22118469    20566863    28004739    29403074    + More
24845553    18362917    19820115    20920257    23761445    25244985    12364791    26334808    28648823    25401762    26823975    20075255    24508170    30249741    20798317    24495485    23254933    25348373    24438588    21282665    15562597    21719571    26108605   

EMBL

KQ461175    KPJ07886.1    GDQN01006232    GDQN01000969    JAT84822.1    JAT90085.1    + More
KQ459302    KPJ01724.1    KC469892    AGC92655.1    AGBW02012562    OWR44821.1    DS235129    EEB12306.1    GEZM01048943    JAV76255.1    PYGN01001545    PSN34156.1    GECU01029472    JAS78234.1    GEDC01019556    JAS17742.1    GECZ01027132    JAS42637.1    GEBQ01029513    JAT10464.1    GEBQ01010241    JAT29736.1    NEVH01024947    PNF16502.1    KK852575    KDR21003.1    GEDC01027934    GEDC01014618    GEDC01010886    JAS09364.1    JAS22680.1    JAS26412.1    KQ971372    KYB25417.1    EFA09505.2    AXCM01002344    ADMH02001968    ETN60136.1    GGFK01009551    MBW42872.1    AAAB01008846    APCN01005677    AXCN02001283    GGFJ01006153    MBW55294.1    GGFJ01006124    MBW55265.1    GGFJ01006123    MBW55264.1    ACPB03021980    GFTR01005550    JAW10876.1    GBGD01001865    JAC87024.1    NNAY01002932    OXU20273.1    GBHO01004342    GBRD01000103    GDHC01018012    GDHC01011728    GDHC01005072    JAG39262.1    JAG65718.1    JAQ00617.1    JAQ06901.1    JAQ13557.1    AAZX01006673    KK107109    EZA59137.1    QOIP01000008    RLU19904.1    GL451230    EFN79690.1    GAMC01009575    JAB96980.1    AMQM01003171    KB096023    ESO09136.1    LBMM01001700    KMQ95876.1    KZ288279    PBC29673.1    JR052404    AEY61691.1    GAKP01004083    JAC54869.1    GDHF01021939    JAI30375.1    KQ434978    KZC13009.1    KQ436033    KOX67521.1    ATLV01023349    KE525342    KFB48965.1    GL438137    EFN69495.1    HACG01029007    CEK75872.1    GL767121    EFZ14085.1    KQ414851    KOC60195.1    GL888378    EGI61998.1    KQ979038    KYN23482.1    KQ976738    KYM75663.1    KQ981200    KYN45008.1    KQ982691    KYQ52056.1    KQ977141    KYN05366.1    CCAG010013940    JXJN01017889    CVRI01000024    CRK92179.1    JRES01001701    KNC20830.1   

Proteomes

UP000053240    UP000053268    UP000007151    UP000192223    UP000009046    UP000245037    + More
UP000235965    UP000027135    UP000007266    UP000075883    UP000000673    UP000075901    UP000076408    UP000075881    UP000075903    UP000075884    UP000076407    UP000075902    UP000075840    UP000075885    UP000075886    UP000015103    UP000215335    UP000002358    UP000053097    UP000279307    UP000075920    UP000008237    UP000075900    UP000015101    UP000036403    UP000242457    UP000005203    UP000075880    UP000069272    UP000076502    UP000053105    UP000030765    UP000000311    UP000053825    UP000076420    UP000007755    UP000078492    UP000078540    UP000078541    UP000075809    UP000078200    UP000078542    UP000092444    UP000092443    UP000092460    UP000091820    UP000183832    UP000037069   

Pfam

PF13176   TPR_7        + More
PF13181   TPR_8
PF07719   TPR_2
PF10250   O-FucT
PF16363   GDP_Man_Dehyd
PF01370   Epimerase
PF07776   zf-AD
PF00096   zf-C2H2

Interpro

IPR013026   TPR-contain_dom        + More
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
IPR013105   TPR_2       
IPR019378   GDP-Fuc_O-FucTrfase       
IPR016040   NAD(P)-bd_dom       
IPR036291   NAD(P)-bd_dom_sf       
IPR001509   Epimerase_deHydtase       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       

SUPFAM

SSF48452   SSF48452        + More
SSF51735   SSF51735       
SSF57667   SSF57667       

Gene 3D

1.25.40.10    

ProteinModelPortal

A0A194QWE1   A0A1E1WCU9   A0A194Q8K0   L7X3T5   A0A212ETP4   A0A1W4W2L2   + More
E0VG00   A0A1Y1LW23   A0A2P8XQ71   A0A1B6HU72   A0A1B6CW60   A0A1B6EXJ5   A0A1B6KH30   A0A1B6M1C5   A0A2J7PJJ0   A0A067RB78   A0A1B6DAN3   A0A139WBW0   D6X1D3   A0A182M3E6   W5J840   A0A2M4AQ78   A0A182T7Y3   A0A182Y7R7   A0A182JZ39   A0A1S4G986   A0A182V1R8   A0A182MZJ5   A0A182XDZ6   A0A182UJJ3   A0A182HGM7   A0A182PFV6   A0A182QJM7   A0A2M4BQL0   A0A2M4BQA6   A0A2M4BQI1   T1I3J5   A0A224XEH6   A0A069DYS8   A0A232EPK0   A0A0A9Z1X8   K7ITE6   A0A026WT09   A0A3L8DHI5   A0A182W4I1   E2BXA7   W8B737   A0A182RH77   T1G1U3   A0A0J7KZT4   A0A2A3ED17   V9IMA5   A0A088A790   A0A034WJL8   A0A0K8UVK7   A0A182IKB8   A0A182F9W4   A0A154PMC5   A0A0N0U2N3   A0A084WFH1   E2AAP5   A0A0B7A5H3   E9IZ96   A0A0L7QNJ1   A0A2C9JEL9   F4WUY4   A0A151JCJ8   A0A195ATV6   A0A195FX42   A0A151WW58   A0A1A9UHX7   A0A195CXJ4   A0A1B0G5L8   A0A1A9Y8M7   A0A1B0BPE9   A0A1A9W940   A0A1J1HW16   A0A0L0BL46  

KEGG

101745706    no KO assigned | (RefSeq) tetratricopeptide repeat protein 17-like

GO

GO:0016021   GO:0030041   GO:0015629   GO:0016740   GO:0016757   GO:0006004   GO:0008446   GO:0050662   GO:0019673   GO:0005634   GO:0008270   GO:0003676  

Length:

103

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.2806

Exp number, first 60 AAs:

20.3002

Total prob of N-in:

0.37558

POSSIBLE N-term signal

sequence

outside

1  -  38

TMhelix

39  -  61

inside

62  -  103

 

 

Pi

339.541509

Theta

193.922712

Tajima's D

2.429226

CLR

0

CSRT

0.938053097345133

Interpretation

Uncertain