Gene

KWMTBOMO05856  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006966

Annotation

PREDICTED:_probable_nuclear_transport_factor_2_isoform_X1_[Papilio_machaon]

Location

Bomo_Chr10(+):12605256-12608196      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.067

CDS

ATGGCGCTCAATCCGCAGTACGATGCAATCGGTAAAGGTTTTGTGCAACAATATTACACATTGTTCGATGATCCGGCTCAACGGGCAAATCTTGTTAATATGTACAATGTTGAAACTTCATTCATGACCTTTGAGGGAGTACAACTGCAGGGTGCTGTTAAAATTATGGAAAAATTAAATAGTTTGACTTTTCAAAAAATCACTAGAATAGTAACTGCTGTGGATTCCCAGCCAATGTTTGATGGAGGCGTTTTAATTAATGTCCTTGGAAGATTGAAGTGTGACGAAGATCCTCCACACCTATACATGCAAACGTTCGTGTTGAAGCCACTCGGAGATTCATTTTATGTTCAGCACGACATTTTCCGTTTAGGCATCCATGACATAGCTTAG

Protein

MALNPQYDAIGKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQGAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLGDSFYVQHDIFRLGIHDIA

Uniprot

H9JBS1   A0A2A4JZW3   A0A2H1X255   I4DME9   L7X1C9   I4DJT4   + More
B6A8J4   A0A1E1WNC8   S4PHI2   A0A1W4WE66   A0A1B6E9B0   A0A1B6MAQ7   A0A2A4JZV3   A0A194QSC6   A0A1B6F2Z3   A0A1B6HHC0   A0A1B6DXH8   D6X1D2   K7J3E1   A0A194Q9N3   A0A2A3END3   V9IJ52   A0A1S4EGD0   A0A088ACJ3   A0A067R933   A0A212ETL0   E2BIZ2   A0A2J7PTH1   A0A154PCZ3   A0A1W4WD76   A0A0L7QYW1   A0A1W4W2M9   E2AE26   A0A0N0U464   T1I158   A0A158NF22   J3JU14   A0A3L8DE56   A0A026WRC3   A0A232F9E4   R4WQ68   E0VCR2   A0A0P4VRS7   A0A0A9ZFN8   C4WRR0   A0A069DP76   R4G548   F4WEM1   A0A023F943   A0A224XYD7   A0A0L7L8A4   T1D5B7   A0A1B0DP65   A0A1B0G5L9   A0A1B0BPE3   A0A2S2N8G0   A0A2H8TJZ1   A0A1A9W936   A0A1A9Y8M5   A0A0L0BNL6   A0A0K8UIP1   A0A182Q282   A0A182PFV7   A0A182VAM7   A0A182JZ40   A0A182U0D5   A0A182XDZ5   A0A182KU75   Q7QFI2   A0A182HGM8   A0A1I8NYI3   A0A182S2A4   A0A182W4I0   A0A1B0GK96   A0A1Q3G265   B0WE01   A0A0A1WWI3   A0A0K8WHJ6   A0A182PF40   A0A0T6AWE4   A0A1J1HXW4   A0A2M3Z1J9   A0A2M4C3D6   A0A1L8EE94   A0A182MSB6   Q16UW1   A0A1I8N6X2   T1E930   A0A2M4CU11   A0A2M4AFA3   A0A182F9W5   A0A182Y291   A0A182MH47   A0A182T3N4   A0A182VJI2   A0A182NJL6   A0A182UI23   A0A182L3E5   A0A182WWQ0   Q7QIQ7  

Pubmed

19121390    22651552    23674305    23622113    26354079    18362917    + More
19820115    20075255    24845553    22118469    20798317    21347285    22516182    30249741    24508170    28648823    23691247    20566863    27129103    25401762    26823975    26334808    21719571    25474469    26227816    24330624    26108605    20966253    12364791    14747013    17210077    25830018    17510324    25315136    25244985   

EMBL

BABH01024588    NWSH01000367    PCG76942.1    ODYU01012799    SOQ59286.1    AK402467    + More
BAM19089.1    KC469892    AGC92656.1    AK401552    BAM18174.1    DQ875254    ABK29496.2    GDQN01007751    GDQN01002559    JAT83303.1    JAT88495.1    GAIX01003267    JAA89293.1    GEDC01002788    JAS34510.1    GEBQ01006971    JAT33006.1    PCG76940.1    KQ461175    KPJ07885.1    GECZ01025199    JAS44570.1    GECU01033616    JAS74090.1    GEDC01006920    JAS30378.1    KQ971372    EFA10795.1    KQ459302    KPJ01725.1    KZ288204    PBC33227.1    JR049745    AEY61060.1    KK852620    KDR20052.1    AGBW02012562    OWR44820.1    GL448543    EFN84337.1    NEVH01021572    PNF19625.1    KQ434874    KZC09691.1    KQ414685    KOC63805.1    GL438827    EFN68259.1    KQ435840    KOX71402.1    ACPB03020977    ADTU01013709    BT126725    AEE61687.1    QOIP01000009    RLU18684.1    KK107119    EZA58528.1    NNAY01000645    OXU27222.1    AK417836    BAN21051.1    DS235063    EEB11168.1    GDKW01000823    JAI55772.1    GBHO01000788    GBRD01016800    GDHC01011662    JAG42816.1    JAG49027.1    JAQ06967.1    ABLF02034675    ABLF02034678    AK339875    BAH70580.1    GBGD01003234    JAC85655.1    GAHY01000800    JAA76710.1    GL888103    EGI67384.1    GBBI01000705    JAC18007.1    GFTR01002826    JAW13600.1    JTDY01002389    KOB71516.1    GALA01000593    JAA94259.1    AJVK01007922    CCAG010013940    CCAG010013941    JXJN01017889    GGMR01000816    MBY13435.1    GFXV01002187    MBW13992.1    JRES01001701    KNC20844.1    GDHF01025898    GDHF01024837    GDHF01012185    GDHF01008625    JAI26416.1    JAI27477.1    JAI40129.1    JAI43689.1    AXCN02000439    AAAB01008846    EAA06639.2    EGK96436.1    APCN01005678    AJWK01028576    GFDL01001140    JAV33905.1    DS231903    EDS45131.1    GBXI01011075    JAD03217.1    GDHF01024653    GDHF01001747    JAI27661.1    JAI50567.1    LJIG01022702    KRT79157.1    CVRI01000024    CRK92180.1    GGFM01001648    MBW22399.1    GGFJ01010644    MBW59785.1    GFDG01001803    JAV16996.1    AXCM01002344    CH477613    EAT38319.1    GAMD01002218    JAA99372.1    GGFL01004483    MBW68661.1    GGFK01006150    MBW39471.1    AXCM01004683    AAAB01008807    EAA04212.2   

Proteomes

UP000005204    UP000218220    UP000192223    UP000053240    UP000007266    UP000002358    + More
UP000053268    UP000242457    UP000079169    UP000005203    UP000027135    UP000007151    UP000008237    UP000235965    UP000076502    UP000053825    UP000000311    UP000053105    UP000015103    UP000005205    UP000279307    UP000053097    UP000215335    UP000009046    UP000007819    UP000007755    UP000037510    UP000092462    UP000092444    UP000092460    UP000091820    UP000092443    UP000037069    UP000075886    UP000075885    UP000075903    UP000075881    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000095300    UP000075900    UP000075920    UP000092461    UP000002320    UP000183832    UP000075883    UP000008820    UP000095301    UP000069272    UP000076408    UP000075901    UP000075884   

PRIDE

H9JBS1   

Pfam

PF02136   NTF2

Interpro

IPR032710   NTF2-like_dom_sf        + More
IPR002075   NTF2       
IPR018222   Nuclear_transport_factor_2_euk       

SUPFAM

SSF54427   SSF54427       

CDD

cd00780  NTF2

ProteinModelPortal

H9JBS1   A0A2A4JZW3   A0A2H1X255   I4DME9   L7X1C9   I4DJT4   + More
B6A8J4   A0A1E1WNC8   S4PHI2   A0A1W4WE66   A0A1B6E9B0   A0A1B6MAQ7   A0A2A4JZV3   A0A194QSC6   A0A1B6F2Z3   A0A1B6HHC0   A0A1B6DXH8   D6X1D2   K7J3E1   A0A194Q9N3   A0A2A3END3   V9IJ52   A0A1S4EGD0   A0A088ACJ3   A0A067R933   A0A212ETL0   E2BIZ2   A0A2J7PTH1   A0A154PCZ3   A0A1W4WD76   A0A0L7QYW1   A0A1W4W2M9   E2AE26   A0A0N0U464   T1I158   A0A158NF22   J3JU14   A0A3L8DE56   A0A026WRC3   A0A232F9E4   R4WQ68   E0VCR2   A0A0P4VRS7   A0A0A9ZFN8   C4WRR0   A0A069DP76   R4G548   F4WEM1   A0A023F943   A0A224XYD7   A0A0L7L8A4   T1D5B7   A0A1B0DP65   A0A1B0G5L9   A0A1B0BPE3   A0A2S2N8G0   A0A2H8TJZ1   A0A1A9W936   A0A1A9Y8M5   A0A0L0BNL6   A0A0K8UIP1   A0A182Q282   A0A182PFV7   A0A182VAM7   A0A182JZ40   A0A182U0D5   A0A182XDZ5   A0A182KU75   Q7QFI2   A0A182HGM8   A0A1I8NYI3   A0A182S2A4   A0A182W4I0   A0A1B0GK96   A0A1Q3G265   B0WE01   A0A0A1WWI3   A0A0K8WHJ6   A0A182PF40   A0A0T6AWE4   A0A1J1HXW4   A0A2M3Z1J9   A0A2M4C3D6   A0A1L8EE94   A0A182MSB6   Q16UW1   A0A1I8N6X2   T1E930   A0A2M4CU11   A0A2M4AFA3   A0A182F9W5   A0A182Y291   A0A182MH47   A0A182T3N4   A0A182VJI2   A0A182NJL6   A0A182UI23   A0A182L3E5   A0A182WWQ0   Q7QIQ7  

PDB

5BXQ     E-value=8.62026e-23,     Score=257

KEGG

101745365    no KO assigned | (RefSeq) probable nuclear transport factor 2

GO

GO:1990904   GO:0003729   GO:0005829   GO:0006913   GO:0006606   GO:0044613   GO:0005622   GO:0006810   GO:0006355   GO:0046983   GO:0008270   GO:0005216   GO:0006811   GO:0006541   GO:0016812   GO:0016597  

Length:

130

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01028

Exp number, first 60 AAs:

0.0065

Total prob of N-in:

0.15986

outside

1  -  130

 

 

Pi

266.661533

Theta

197.976796

Tajima's D

1.173576

CLR

0.852086

CSRT

0.705714714264287

Interpretation

Uncertain