SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05849
Pre Gene Modal
BGIBMGA006963
Annotation
hypothetical_protein_KGM_13821_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 1.774 PlasmaMembrane   Reliability : 2.167
 

Sequence

CDS
ATGATTAAAAACAACCAAATAATTTGGCTTGCCGAAACCAACAACTTTTTAATTAGCACCGATGACAGTGATACAGACAGTTTCAGTCATGTATCTAATGTCGAGGGAAACTCTTCAGAAATTGAGTGGCCTGATGATGAGGACGATGAAATTTTTTTTCCTCCTATGCAATATTTTATAAGACTAAGAAGAAGACGAGTCGATGATTATATGCATATTATAGATTCATGGACTGACGCCGAATTTAAAAATCGAATGAGATTATCAAGAAAAACAGCATTTCGTCTTATTGGTGAATTGGACAAATCAGGATTCATTGCATCACATAAATTTGGACTTAAACCACTCGAGTCAAAGTTATGTTTTTACATATTTCTAACATTTATCTCAAATACTGAACCCTTAACACCAATTGCTACCCGTTTTGATATTTCAATATCATCAACATTTCGTGTCATAAGAAAAGTGGCATCATGGATTTTGACAAAACTGAATGATGCCATAAGATGGCCACAAGATTTTAATGAAATACAATATATTTGTGACAATTTCCATTTAAAGACTGGAATCTCAAACATTTTAGGTGTTATAGATCGTACCCACATAAGAATAGAAAAACCTAAAAATGCTCGAGAGTACTGTAATCCCAAAGGTCACTTTTCAATAATTTTGCAAGCAACGATTGATTCACAATTGAGATTTACAAACATCTTTTGTGGAGAACCAGGCTCATCCAACTGCACTCGGGCCTTGAAGAAATCACCTTTATATCATACAGCAACTCATGACAGAAATTCTTTGTTTCCACACAATACATTTTTAATAGGCCACTCAGGGTATCCATCTTTACCATGGCTAGTACCACCATTTAGAGAAAATAAAAGGCTGACACCTCAACAAAGAGAATTTAATGCATTACATGCATCTGCTAGAAAGTTGGGCGATAGAGCTTTTATTCTGTTAAAGGCTAGGTTCCGCAGAATTAAATTGTTTACTGTTTATCGAAATATAGCTTTCATCACAGACATGATTGTAGCTGCATGTATACTCCATAATTATTGCTTGAATGAAAATGATCATTTAGAGGTTAATCACGACTAA
Protein
MIKNNQIIWLAETNNFLISTDDSDTDSFSHVSNVEGNSSEIEWPDDEDDEIFFPPMQYFIRLRRRRVDDYMHIIDSWTDAEFKNRMRLSRKTAFRLIGELDKSGFIASHKFGLKPLESKLCFYIFLTFISNTEPLTPIATRFDISISSTFRVIRKVASWILTKLNDAIRWPQDFNEIQYICDNFHLKTGISNILGVIDRTHIRIEKPKNAREYCNPKGHFSIILQATIDSQLRFTNIFCGEPGSSNCTRALKKSPLYHTATHDRNSLFPHNTFLIGHSGYPSLPWLVPPFRENKRLTPQQREFNALHASARKLGDRAFILLKARFRRIKLFTVYRNIAFITDMIVAACILHNYCLNENDHLEVNHD

Summary

EMBL
BABH01024579    BABH01024580    NWSH01003269    PCG66640.1    AGBW02012562    OWR44813.1    + More
GDQN01009860    GDQN01009693    GDQN01009102    GDQN01001586    JAT81194.1    JAT81361.1    JAT81952.1    JAT89468.1    GDQN01004059    JAT86995.1    KQ461175    KPJ07880.1    KQ459302    KPJ01731.1    LBMM01010581    KMQ87376.1    GEZM01052782    JAV74277.1    GDAI01001878    JAI15725.1    GBXI01005666    JAD08626.1    GDAI01000246    JAI17357.1    GDAI01001874    JAI15729.1    GDAI01001818    JAI15785.1    GDAI01002477    JAI15126.1    GAKP01018423    JAC40529.1    GAKP01010360    JAC48592.1    GAMC01017240    JAB89315.1    GDHF01000482    JAI51832.1    GDHF01004747    JAI47567.1    GAMC01017239    JAB89316.1    ADTU01017516    LBMM01014180    KMQ85286.1    GGMR01010939    MBY23558.1    KK854891    PTY19538.1    ADTU01020809    PYGN01001550    PSN34130.1    GEHC01001109    JAV46536.1    NEVH01000001    PNF44150.1    GGMR01007243    MBY19862.1    ABLF02031339    ABLF02005251    GEHC01001107    JAV46538.1    GEZM01096173    GEZM01096171    GEZM01096170    JAV55097.1    JH431701    KK852790    KDR16496.1    GFXV01006076    MBW17881.1    GBBK01005178    JAC19304.1    BDIQ01000123    GBC40508.1    JEMT01026012    EXX60179.1    LBMM01011610    KMQ86741.1    GEZM01090601    JAV57241.1    ABLF02027754    GEZM01018890    GEZM01018886    JAV89991.1    GEZM01102751    JAV51808.1    LBMM01003281    KMQ93705.1    GEZM01024175    GEZM01024174    GEZM01024173    GEZM01024168    JAV87901.1    BEXD01001482    GBB94326.1    GEZM01091777    JAV56767.1    KQ977509    KYN02261.1    AAZX01004653    KQ982850    KYQ49930.1    GEZM01099032    GEZM01099031    JAV53553.1    DS497670    EFA13039.1    GGMR01009488    MBY22107.1    GEGO01003619    JAR91785.1    GEZM01096166    JAV55108.1    ABLF02042735    GEZM01101828    JAV52263.1    GEHC01000288    JAV47357.1    GGMR01016886    MBY29505.1    ABLF02039915    JH431954    ABLF02061850    ABLF02033148    CR788231    JH431966    GL768056    EFZ12759.1    RQTK01000118    RUS87168.1    BDIQ01000006    GBC11369.1    AYCK01000619    GEZM01024176    GEZM01024166    JAV87925.1    CR749167   
Pfam
PF13359   DDE_Tnp_4        + More
PF05485   THAP
Interpro
IPR027806   HARBI1_dom        + More
IPR036390   WH_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR026103   HARBI1_animal       
IPR038441   THAP_Znf_sf       
IPR006612   THAP_Znf       
SUPFAM
SSF46785   SSF46785        + More
SSF46689   SSF46689       
Gene 3D

Ontologies

Topology

Length:
366
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
13.22941
Exp number, first 60 AAs:
0
Total prob of N-in:
0.35755
outside
1  -  366
 
 

Population Genetic Test Statistics

Pi
151.271933
Theta
154.527392
Tajima's D
-0.288294
CLR
0.023299
CSRT
0.283285835708215
Interpretation
Uncertain
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