Gene

KWMTBOMO05840

Pre Gene Modal

BGIBMGA006956

Annotation

PREDICTED:_ras-related_protein_Rab-37_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr10(+):11867611-11873696      View in EpiBrowser

Full name

Ras-related protein Rab-37       + More
Ras-related protein Rab-26      

Location in the cell

Cytoplasmic   Reliability : 1.419 Nuclear   Reliability : 1.924

CDS

ATGTGGAATCCGAATATGGATAACAGGCAAATGGAAAAGCGCGTTGTGGTCGGTAGAGTCCGACCGACCTGGGCCAGGAACCTTCCGGATGCTAGAGATGAGGACGAGAGGAGTGACCAGGAAGGCGTGATGCCTCACAGCGAACCTCCCTCGCCTACTGAACAGTGGGAGCAGCAAGCCAAACAGGAAGATAAATATGATGTTTTTGGGAAGGTTATGCTGCTCGGTGACAGTGGAGTTGGAAAGACGTGCATGTTAGTACGTTTCCGGGATGGCACGTTTCTCGCAGGAAACTACATATCGACCGTCGGCATCGACTTCCGGAACAAGGTAGTCACAGTTGACGGAATCAAGGTGAAGTTGCAGATTTGGGACACCGCCGGCCAAGAGCGCTTTCGTAGCGTCACGCATGCTTATTACAGGGACGCACATGCGTTGCTGCTGCTCTATGATGTGACAAACAAGACGAGTTTCGACAACATTCGAGCGTGGCTCGGAGAGATTCGGGAGTACGCACAGGACGACGTGGTCATAATGCTATTAGGTAACAAATCCGATAGCGGCCTAGAGAGGGCGGTGAAGCGGGAGGAGGGGCAGCGCTTGGCGAGAGAGTACCAAGTCGCCTTTATGGAGACATCAGCCAAAACCGGACTGAATGTCGAAGCTGCCTTCGCCCACGTGGCGCGATCGCTCGTCGCCAAAGCGAACCCCGTCGATCCGTCGAGGCTGGCGGTGCGCGCGCAGCCATCACAAGAACAACGGTCATCGTGTCCGCCATGTACATAA

Protein

MWNPNMDNRQMEKRVVVGRVRPTWARNLPDARDEDERSDQEGVMPHSEPPSPTEQWEQQAKQEDKYDVFGKVMLLGDSGVGKTCMLVRFRDGTFLAGNYISTVGIDFRNKVVTVDGIKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTSFDNIRAWLGEIREYAQDDVVIMLLGNKSDSGLERAVKREEGQRLAREYQVAFMETSAKTGLNVEAAFAHVARSLVAKANPVDPSRLAVRAQPSQEQRSSCPPCT

Description

Participates in exocrine secretion: regulates the secretion of acinar granules in the parotid gland.

Subunit

Interacts with RIMS1.

Miscellaneous

The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry.

Similarity

Belongs to the small GTPase superfamily. Rab family.

Keywords

Acetylation   Alternative splicing   Complete proteome   Cytoplasmic vesicle   Direct protein sequencing   GTP-binding   Lipoprotein   Methylation   Nucleotide-binding   Polymorphism   Prenylation   Protein transport   Reference proteome   Transport   Cell membrane   Membrane  

Feature

chain  Ras-related protein Rab-37
propeptide  Removed in mature form
splice variant  In isoform 2.
sequence variant  In dbSNP:rs34215331.

Uniprot

H9JBR1   A0A2H1VFU8   A0A194QQU7   A0A212FKH4   A0A194Q8L8   A0A3S2P8A4   + More
A0A067RPC5   D6WZP3   A0A2J7RDX6   A0A1B6LKB6   A0A0P4VLS7   T1HS10   E0V8Y0   F4X3M5   A0A154PCY4   A0A1S3JAK3   A0A0L7R7E8   A0A210QM29   A0A195E0A1   V9I8F0   E2ATU0   A0A2A3EKC3   A0A088AQ21   A0A3L8DXR1   W5MZ56   A0A310SR84   A0A1W4WKX5   A0A3B4E313   A0A1S3J9Z6   V3ZNH1   A0A3B1IK83   V9KUK7   V9KVX5   W5M114   A0A2K5D688   F6PFT6   A0A3P9A8Z4   A0A2U3W527   A0A3B3S8W1   A0A3Q7PHC6   V9L672   M3VWZ9   A0A195F2Z6   A0A3P8WMN9   A0A1W5AWA3   H3D201   E2RHA1   A0A3Q7SJB4   A0A2Y9DGL9   A0A3B4AUU3   A0A341CNU3   W5UJQ9   A0A0F8C6E3   A0A060Y8E2   A0A0C9QHS2   A0A3S2MY99   A0A1A7WUU8   A0A3B5KHW8   A0A3Q1HMV0   R7TL47   A0A384A319   D4A0G7   A0A3B4U0T8   A0A1S3S3N7   M3WNH3   Q544E8   A0A0P6K1Y0   A0A2K6UR36   A0A2Y9HQR4   A0A2U3VIA2   A0A3B4YA49   A0A3P9HMR5   A0A2K5RLK0   A0A3B3HBX7   A0A3Q7N6P0   G3SFF7   S9X2Q8   A0A024R8K6   Q96AX2   A0A3B3QXD3   A0A2Y9KLL3   M5FMU1   Q29RR0   A0A3P9LF56   A0A2Y9G544   A0A2U3Z3Q3   G3PB72   A0A3P8YEA6   A0A3B3BRS7   H0VZM2  

Pubmed

19121390    26354079    22118469    24845553    18362917    19820115    + More
27129103    20566863    21719571    28812685    20798317    30249741    23254933    25329095    24402279    17495919    25069045    29240929    17975172    24487278    15496914    16341006    25463417    23127152    25835551    24755649    21551351    15057822    15632090    10349636    11042159    11076861    11217851    11773082    11856727    12466851    12040188    12578829    15489334    16141073    16923123    19468303    21183079    17554307    22398555    23149746    11181995    14702039    16625196    12665801    19393038    29451363    21993624   

EMBL

BABH01024540    ODYU01002338    SOQ39705.1    KQ461175    KPJ07867.1    AGBW02008031    + More
OWR54244.1    KQ459302    KPJ01744.1    RSAL01000003    RVE54828.1    KK852548    KDR21594.1    KQ971372    EFA09670.1    NEVH01005280    PNF39033.1    GEBQ01016102    GEBQ01015890    JAT23875.1    JAT24087.1    GDKW01003210    JAI53385.1    ACPB03021631    DS234986    EEB09836.1    GL888624    EGI58822.1    KQ434874    KZC09647.1    KQ414639    KOC66807.1    NEDP02002941    OWF49796.1    KQ979955    KYN18526.1    JR036732    AEY57355.1    GL442691    EFN63173.1    KZ288232    PBC31481.1    QOIP01000003    RLU24875.1    AHAT01000248    KQ761346    OAD57831.1    KB203251    ESO85847.1    JW869634    AFP02152.1    JW869926    AFP02444.1    AHAT01031993    AHAT01031994    AHAT01031995    AHAT01031996    JW875006    AFP07523.1    AANG04004184    KQ981856    KYN34552.1    AAEX03006308    JT417363    AHH42359.1    KQ041555    KKF25589.1    FR906811    CDQ85435.1    GBYB01003089    JAG72856.1    CM012444    RVE69316.1    HADW01008046    HADX01001462    SBP09446.1    AMQN01002529    KB309449    ELT94379.1    AC094435    CH473948    EDM06560.1    AANG04000231    AL606487    BC128020    AK039716    AK040216    AB232633    CH466558    AAI28021.1    BAC30426.1    BAC30543.1    BAF02895.1    EDL34459.1    GEBF01006054    JAN97578.1    CABD030036106    CABD030036107    CABD030036108    CABD030036109    CABD030036110    KB016710    EPY84947.1    CH471099    EAW89181.1    AK098068    AK290202    AK296172    AK303442    AC016888    AC064805    BC016615    BC040547    GJ062847    DAA15588.1    BC114066    AAKN02047289    AAKN02047290   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000283053    UP000027135    + More
UP000007266    UP000235965    UP000015103    UP000009046    UP000007755    UP000076502    UP000085678    UP000053825    UP000242188    UP000078492    UP000000311    UP000242457    UP000005203    UP000279307    UP000018468    UP000192223    UP000261440    UP000030746    UP000018467    UP000233020    UP000002280    UP000265140    UP000245340    UP000261540    UP000286641    UP000011712    UP000078541    UP000265120    UP000192224    UP000007303    UP000002254    UP000286640    UP000248480    UP000261520    UP000252040    UP000221080    UP000193380    UP000005226    UP000265040    UP000014760    UP000261681    UP000002494    UP000261420    UP000087266    UP000000589    UP000233220    UP000248481    UP000261360    UP000265200    UP000233040    UP000001038    UP000001519    UP000005640    UP000248482    UP000009136    UP000265180    UP000245341    UP000007635    UP000261560    UP000005447   

PRIDE

H9JBR1    D4A0G7    Q96AX2    Q29RR0   

Pfam

PF00071   Ras

Interpro

IPR027417   P-loop_NTPase        + More
IPR001806   Small_GTPase       
IPR005225   Small_GTP-bd_dom       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

H9JBR1   A0A2H1VFU8   A0A194QQU7   A0A212FKH4   A0A194Q8L8   A0A3S2P8A4   + More
A0A067RPC5   D6WZP3   A0A2J7RDX6   A0A1B6LKB6   A0A0P4VLS7   T1HS10   E0V8Y0   F4X3M5   A0A154PCY4   A0A1S3JAK3   A0A0L7R7E8   A0A210QM29   A0A195E0A1   V9I8F0   E2ATU0   A0A2A3EKC3   A0A088AQ21   A0A3L8DXR1   W5MZ56   A0A310SR84   A0A1W4WKX5   A0A3B4E313   A0A1S3J9Z6   V3ZNH1   A0A3B1IK83   V9KUK7   V9KVX5   W5M114   A0A2K5D688   F6PFT6   A0A3P9A8Z4   A0A2U3W527   A0A3B3S8W1   A0A3Q7PHC6   V9L672   M3VWZ9   A0A195F2Z6   A0A3P8WMN9   A0A1W5AWA3   H3D201   E2RHA1   A0A3Q7SJB4   A0A2Y9DGL9   A0A3B4AUU3   A0A341CNU3   W5UJQ9   A0A0F8C6E3   A0A060Y8E2   A0A0C9QHS2   A0A3S2MY99   A0A1A7WUU8   A0A3B5KHW8   A0A3Q1HMV0   R7TL47   A0A384A319   D4A0G7   A0A3B4U0T8   A0A1S3S3N7   M3WNH3   Q544E8   A0A0P6K1Y0   A0A2K6UR36   A0A2Y9HQR4   A0A2U3VIA2   A0A3B4YA49   A0A3P9HMR5   A0A2K5RLK0   A0A3B3HBX7   A0A3Q7N6P0   G3SFF7   S9X2Q8   A0A024R8K6   Q96AX2   A0A3B3QXD3   A0A2Y9KLL3   M5FMU1   Q29RR0   A0A3P9LF56   A0A2Y9G544   A0A2U3Z3Q3   G3PB72   A0A3P8YEA6   A0A3B3BRS7   H0VZM2  

PDB

2G6B     E-value=1.05159e-73,     Score=701

KEGG

101736393    K07914 Ras-related protein Rab-37 | (RefSeq) ras-related protein Rab-37

GO

GO:0005525   GO:0003924   GO:0004767   GO:0032482   GO:0005623   GO:0006886   GO:0005793   GO:0000139   GO:0035272   GO:0045055   GO:0098993   GO:0043001   GO:0030667   GO:0019002   GO:0099575   GO:0035579   GO:0005886   GO:0043312   GO:0035577   GO:0031226   GO:0017157   GO:0007264   GO:0005975   GO:0000287   GO:0051287   GO:0005216   GO:0006811   GO:0006541   GO:0016812   GO:0016597  

Subcellular location

Cytoplasmic vesicle   Secretory granules.   With evidence from 1 publications.
Cell membrane  

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0332500000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14734

outside

1  -  261

 

 

Pi

191.459938

Theta

180.470216

Tajima's D

0.148372

CLR

0.077476

CSRT

0.410029498525074

Interpretation

Possibly Positive selection