Gene

KWMTBOMO05838

Pre Gene Modal

BGIBMGA006955

Annotation

PREDICTED:_ras-related_protein_Rab-37_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(+):11797261-11821402      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.432 Nuclear   Reliability : 1.692

CDS

ATGGGAACGGACGACAGCATGAGTGATGATGTTTTTGAAGACGAGACTCTTCGAGCCCCCAAAGTTCGAAGCACTCCGTCTCCGACCGGGTACAGGGACTACCATCCTCCCGCAGAAACTCCCATGCGGTATCACGCCGAGGAAGACGTGCCAATTCACAAGACAATCTTGCTGGGCGACAGCGGTGTCGGGAAAACATCTTTATTGGTACAATTCGAAACTGGGAAATTCCAGGCTGGGAATTTCTCAGCCACCGTGGGTATCGGATTCACGCATAACTATAAAGACTTATGA

Protein

MGTDDSMSDDVFEDETLRAPKVRSTPSPTGYRDYHPPAETPMRYHAEEDVPIHKTILLGDSGVGKTSLLVQFETGKFQAGNFSATVGIGFTHNYKDL

Uniprot

H9JBR0   A0A3S2P8A4   A0A2A4ITH7   A0A194QWC1   A0A194Q9Q6   A0A212FLB1   + More
A0A1B6DTS0   A0A1Y1NHN2   A0A2R7WED3   K7IPM4   E0V8Y1   A0A023F573   A0A0C9Q020   A0A0C9R9G8   E2BY93   D6WZP3   A0A088AQ20   A0A2J7RDX0   A0A1W4WM33   A0A3L8DWN0   J3JXT7   A0A154PCL8   A0A158P0K2   J9K4Y3   A0A2S2P0W3   N6U455   A0A2H8TKA1   A0A3Q0JF93   U4UGU2   U4U9S9   A0A2S2QKU0   A0A2H8TP77   A0A3R7M6D3   A0A3M7T5K9   K1PHU4   A0A0P5SKL8   A0A0P5CGV7   A0A0P5K7E3   A0A0P5D9Y7   A0A0P5YM76   A0A0P6I1I5   A0A0N8DV46   C3Z6Q6   A0A3P9AMQ3   A0A1B0G8H4  

Pubmed

19121390    26354079    22118469    28004739    20075255    20566863    + More
25474469    20798317    18362917    19820115    30249741    22516182    21347285    23537049    30375419    22992520    18563158    25069045   

EMBL

BABH01024538    BABH01024539    RSAL01000003    RVE54828.1    NWSH01007235    PCG63031.1    + More
KQ461175    KPJ07866.1    KQ459302    KPJ01745.1    AGBW02007801    OWR54538.1    GEDC01008253    JAS29045.1    GEZM01001999    JAV97412.1    KK854700    PTY18013.1    DS234986    EEB09837.1    GBBI01002488    JAC16224.1    GBYB01007178    JAG76945.1    GBYB01004760    JAG74527.1    GL451420    EFN79372.1    KQ971372    EFA09670.1    NEVH01005280    PNF39023.1    QOIP01000003    RLU24643.1    BT128058    AEE63019.1    KQ434874    KZC09646.1    ADTU01005221    ADTU01005222    ADTU01005223    ADTU01005224    ADTU01005225    ADTU01005226    ADTU01005227    ABLF02029061    GGMR01010421    MBY23040.1    APGK01050185    KB741167    ENN73372.1    GFXV01002782    MBW14587.1    KB632191    ERL89816.1    ERL89817.1    GGMS01009125    MBY78328.1    GFXV01003637    MBW15442.1    QCYY01002689    ROT68336.1    REGN01000237    RNA43326.1    JH817328    EKC18484.1    GDIP01142157    JAL61557.1    GDIP01170549    JAJ52853.1    GDIQ01188366    GDIP01115907    LRGB01000642    JAK63359.1    JAL87807.1    KZS17132.1    GDIP01175301    JAJ48101.1    GDIP01055758    JAM47957.1    GDIQ01018646    JAN76091.1    GDIQ01088900    JAN05837.1    GG666590    EEN51502.1    CCAG010000256   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000002358    UP000009046    UP000008237    UP000007266    UP000005203    UP000235965    UP000192223    UP000279307    UP000076502    UP000005205    UP000007819    UP000019118    UP000079169    UP000030742    UP000283509    UP000276133    UP000005408    UP000076858    UP000001554    UP000265140    UP000092444   

Pfam

PF00071   Ras        + More
PF16207   RAWUL
PF08920   SF3b1
PF01233   NMT
PF02799   NMT_C

Interpro

IPR027417   P-loop_NTPase        + More
IPR001806   Small_GTPase       
IPR005225   Small_GTP-bd_dom       
IPR017907   Znf_RING_CS       
IPR032443   RAWUL       
IPR016024   ARM-type_fold       
IPR034085   TOG       
IPR013083   Znf_RING/FYVE/PHD       
IPR038737   SF3b_su1-like       
IPR011989   ARM-like       
IPR015016   SF3b_su1       
IPR001841   Znf_RING       
IPR022676   MyristoylCoA_TrFase_N       
IPR016181   Acyl_CoA_acyltransferase       
IPR022677   MyristoylCoA_TrFase_C       
IPR022678   MyristoylCoA_TrFase_CS       

SUPFAM

SSF52540   SSF52540        + More
SSF48371   SSF48371       
SSF55729   SSF55729       

Gene 3D

1.25.10.10     3.30.40.10    

ProteinModelPortal

H9JBR0   A0A3S2P8A4   A0A2A4ITH7   A0A194QWC1   A0A194Q9Q6   A0A212FLB1   + More
A0A1B6DTS0   A0A1Y1NHN2   A0A2R7WED3   K7IPM4   E0V8Y1   A0A023F573   A0A0C9Q020   A0A0C9R9G8   E2BY93   D6WZP3   A0A088AQ20   A0A2J7RDX0   A0A1W4WM33   A0A3L8DWN0   J3JXT7   A0A154PCL8   A0A158P0K2   J9K4Y3   A0A2S2P0W3   N6U455   A0A2H8TKA1   A0A3Q0JF93   U4UGU2   U4U9S9   A0A2S2QKU0   A0A2H8TP77   A0A3R7M6D3   A0A3M7T5K9   K1PHU4   A0A0P5SKL8   A0A0P5CGV7   A0A0P5K7E3   A0A0P5D9Y7   A0A0P5YM76   A0A0P6I1I5   A0A0N8DV46   C3Z6Q6   A0A3P9AMQ3   A0A1B0G8H4  

PDB

2G6B     E-value=3.90843e-07,     Score=122

KEGG

NA   

GO

GO:0003924   GO:0005525   GO:0000245   GO:0003729   GO:0004379   GO:0032482   GO:0005623   GO:0006886   GO:0007264   GO:0005975   GO:0000287   GO:0051287   GO:0005216   GO:0006811   GO:0006541   GO:0016812   GO:0016597  

PANTHER

PTHR12097  

Length:

97

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09782

Exp number, first 60 AAs:

0.00132

Total prob of N-in:

0.27351

outside

1  -  97

 

 

Pi

208.316088

Theta

166.038868

Tajima's D

0.789077

CLR

0.258339

CSRT

0.596970151492425

Interpretation

Uncertain