Gene

KWMTBOMO05837

Pre Gene Modal

BGIBMGA006954

Annotation

PREDICTED:_uncharacterized_protein_LOC106134838_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr10(+):11744563-11746753      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.044

CDS

ATGGAATCGAATTCGAATAGTTCCTGTGATATTGTCTATCCAAAATTAGAAGTCGATTTGGATAATGACATCATAAGTAGAAGAGAAGCGCGACTCCAGTGGAATTCAGACATGACCATGCAGTTGATTCAGACACTGGAAAAGGAATGTCCGGAGTTGTGGGACACAAAACATCCATTGAACAGGGAGCGGTCTGCGCGTCAGTTGAAATTAGAGTACATGGCGGACATTTTCGGGACGACATCGGAAGAGATAAGCAGAAAAATACATAATTTGCGGACGCAATTGAACAATGAACTGCGGAAGATTAAAAAGAGGTCGATCGGGGAAGCTGTCGCCGCCGGAGGGAGCGGCTGGGAGTATTTTGAAGCCCTCTCGTTTCTACGTTCGCCCACTACAGATCCGCTCGACGTAATGGACGCAGTTAATGTCGAGTTAGCTGAATTTCAAGCGAAAGAAGAGCAAGAATTCGGAGCCGCCAGAGCGAAGAGTGCGTCAGCAGCTACAGTACCAGTAGCTGCCTCTAGTCCGCCCATTAAACCCACGAATAAGATGAGGGTAGCCGCCTCAGGGCCCCCACCCCTGCCATTGAGCGCGCATCCTTTGATGTGGCAGGAGGACGCAGTGCCGAAACTACGGCCCAGTCTTGACGCTGATGAATGTCAGATATTTGGCGACTTCGTAGCTTCAGAACTAAGGACACTGCGTTCGAATGAGTCTCGCAAAAAACTGAAACGGATGATCCAGAAGGCGATCCTTCAGGTCGGCGAGGAGGAGGACGTGAATATAATCACTGGATAG

Protein

MESNSNSSCDIVYPKLEVDLDNDIISRREARLQWNSDMTMQLIQTLEKECPELWDTKHPLNRERSARQLKLEYMADIFGTTSEEISRKIHNLRTQLNNELRKIKKRSIGEAVAAGGSGWEYFEALSFLRSPTTDPLDVMDAVNVELAEFQAKEEQEFGAARAKSASAATVPVAASSPPIKPTNKMRVAASGPPPLPLSAHPLMWQEDAVPKLRPSLDADECQIFGDFVASELRTLRSNESRKKLKRMIQKAILQVGEEEDVNIITG

Uniprot

H9JBQ9   A0A2A4IVB2   A0A212F941   A0A2H1VXI7   A0A0L7KYQ1   A0A194QSA6   + More
A0A194QE55   A0A194PMW0   A0A1L8DFP6   A0A0M4EES8   A0A310SDD1   D6WG00   A0A0L7RBY2   A0A146M430   B3MCP1   B4J665   B4KLW3   A0A0T6AYI1   A0A2A4IUG8   A0A212EI39   A0A194RCA9   A0A2H1WTG6   S4PM90   A0A194PWF2   A0A194QQT1  

Pubmed

19121390    22118469    26227816    26354079    18362917    19820115    + More
26823975    17994087    23622113   

EMBL

BABH01024536    NWSH01006196    PCG63599.1    AGBW02009639    OWR50266.1    ODYU01004878    + More
SOQ45202.1    JTDY01004239    KOB68408.1    KQ461175    KPJ07865.1    KQ459302    KPJ01746.1    KQ459604    KPI92460.1    GFDF01008818    JAV05266.1    CP012524    ALC42640.1    KQ773953    OAD52329.1    KQ971328    EFA00959.2    KQ414616    KOC68477.1    GDHC01004105    JAQ14524.1    CH902619    EDV36275.1    CH916367    EDW01923.1    CH933808    EDW09773.1    LJIG01022514    KRT80172.1    NWSH01007210    PCG63038.1    AGBW02014723    OWR41131.1    KQ460397    KPJ15237.1    ODYU01010888    SOQ56272.1    GAIX01000256    JAA92304.1    KQ459589    KPI97706.1    KPJ07863.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    + More
UP000092553    UP000007266    UP000053825    UP000007801    UP000001070    UP000009192   

PRIDE

H9JBQ9   

Pfam

PF10545   MADF_DNA_bdg        + More
PF16757   Fucosidase_C
PF01120   Alpha_L_fucos

Interpro

IPR006578   MADF-dom        + More
IPR016286   FUC_metazoa-typ       
IPR013780   Glyco_hydro_b       
IPR031919   Fucosidase_C       
IPR017853   Glycoside_hydrolase_SF       
IPR000933   Glyco_hydro_29       

SUPFAM

SSF51445   SSF51445       

Gene 3D

2.60.40.1180    

ProteinModelPortal

H9JBQ9   A0A2A4IVB2   A0A212F941   A0A2H1VXI7   A0A0L7KYQ1   A0A194QSA6   + More
A0A194QE55   A0A194PMW0   A0A1L8DFP6   A0A0M4EES8   A0A310SDD1   D6WG00   A0A0L7RBY2   A0A146M430   B3MCP1   B4J665   B4KLW3   A0A0T6AYI1   A0A2A4IUG8   A0A212EI39   A0A194RCA9   A0A2H1WTG6   S4PM90   A0A194PWF2   A0A194QQT1  

KEGG

101743872    no KO assigned | (RefSeq) uncharacterized LOC101743872

GO

GO:0006004   GO:0004560  

PANTHER

PTHR10030  

Length:

266

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00584999999999998

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06433

outside

1  -  266

 

 

Pi

292.004072

Theta

236.110981

Tajima's D

0.630871

CLR

0.201673

CSRT

0.554322283885806

Interpretation

Uncertain