Gene

KWMTBOMO05834  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006905

Annotation

alpha-L-fucoside_fucohydrolase_[Spodoptera_litura]

Location

Bomo_Chr10(-):11537562-11540802      View in EpiBrowser

Location in the cell

Lysosomal   Reliability : 1.44

CDS

ATGAAGTCATTTTTCTTGGTATTCTTATTCGGATTCGTGAACGGCGCCATACACAATCGTCGTGATCATAGTTCGCATAATAAAATACTAAATAAGCGGTATTCTCCTGATTGGAACGATTTGGATACACGACCGTTGCCAGAGTGGTATGATAAAGCAAAAATAGGCATTTTCCTACATTGGGGCGTCTATTCTGTGCCCGGTTTTGGATCCGAATGGTTTTGGAGCAATTGGAAAGGTGGTAACCGACAATGCATCGATTTCATGACGAAAAATTATCCTCCAGGATTCACCTATCAGGAATTCGCACCCGCATTCAAAGCCGAGTTTTTCGATCCGGACAAATGGGCGGATCTTTTCGTAAAAGCCGGAGCAAAATACGTAGTGCTAACAAGTAAACATCATGAGGGCTTCACTTTGTTCCCGTCAAAACGTTCGTTCAGTTGGAATTCCGTCGAAGTGGGCCCAAAACGCGATATCGTCGGGGACCTGGCTAAGGCGGTGCGAAACACAAGCTTGAAATTCGGCGTTTATCATTCGCTTTACGAGTGGTTCAACCCTATTTACGAAGAGGACAAGAGGAAGGCCTTCAAAACTCAGACGTACGTTGACACGAAACTGTGGCCGGACATAAAACAGATCGTTCACGATTACAAGCCCTCCGTTATATGGTCTGACGGTGATTGGGAAGCGAACGACACCTACTGGCGGTCCACGGAACTGCTCGCCTGGTTGTACAACGACAGCCCTGTCAAAGACGAAGTAGTCGTCAACGATCGTTGGGGCATCGGCATACCAGGAAAGCACGGCGATTTCTACAATCATCAAGACAGATTTAACCCTGGAGTCCTTTTGCACCATAAGTGGGAAAACGCGTTCACTGTGGACTCCGGATCTTGGGGATACAGGCGGAATATGCAAATACGCGAAATATTGACGATTGAAGAATTGCTCCAACAAATCGTAACAACAGTTAGCTGCGGGGGAAACGCGCTCATAAATGTCGGTCCAACTAAAGAAGGTACGATCGCCCCGATATTTGAGGAACGACTTTTGGCGCTAGGCGACTGGCTCCAAATAAACGGCGAGGCCATATACAGCTCCTCGCCGTGGGAGTATCAAAACGACACTCTAAATGGCAAAGTTTGGTACACTTGTTCGATTAATAGAAGCAATAGTATGAAACGTACATACCGCAGTGGACAAGTGACTGCAATCTACGCTATTTTACTCGAATGGCCTAGCGACAACAGACTATCCGTTCGAAGTATCACAAACTCTTTGCGCAGTAGGTACAACCAACTTGAGATGTTAGGCAACGAAGGAACATACTTAAATTGGAAGATTACGAATGGGGACGTTGAAATTGAGCTTCCAGATAGAGCAACAGTAAAATCAAATCACGCTTGGGTCCTCAAACTCGCGACCACATAA

Protein

MKSFFLVFLFGFVNGAIHNRRDHSSHNKILNKRYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKGGNRQCIDFMTKNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNSVEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIYEEDKRKAFKTQTYVDTKLWPDIKQIVHDYKPSVIWSDGDWEANDTYWRSTELLAWLYNDSPVKDEVVVNDRWGIGIPGKHGDFYNHQDRFNPGVLLHHKWENAFTVDSGSWGYRRNMQIREILTIEELLQQIVTTVSCGGNALINVGPTKEGTIAPIFEERLLALGDWLQINGEAIYSSSPWEYQNDTLNGKVWYTCSINRSNSMKRTYRSGQVTAIYAILLEWPSDNRLSVRSITNSLRSRYNQLEMLGNEGTYLNWKITNGDVEIELPDRATVKSNHAWVLKLATT

Similarity

Belongs to the glycosyl hydrolase 29 family.

Uniprot

H9JBL0   A0A2A4ISS5   S5G3E0   A0A2H1WT93   A0A194QQT1   I4DJT3   + More
A0A194QE59   A0A3S2PLH2   A0A139WLC8   A0A1Y1KFM4   A0A194Q9R1   J3JXT8   V5GJB8   A0A067RQD7   V5HEY6   V5H5I0   V5II28   A0A0M8ZVM1   A0A0P5N9Z1   A0A182XYI1   W5JS94   A0A0P5EPC0   E9H8P9   A0A3M7R5S5   D6WGK5   A0A0P5VYW7   A0A0L7LJS9   A0A182T8J7   E2B4G2   A0A182FG61   A0A2M4BMU3   A0A182MTE9   A0A182WJM1   A0A2J7R465   A0A1B0CDN8   A0A310S8R9   A0A182RTY3   A0A139WKN6   A0A182G2D9   A0A2M4BM62   A0A0U4CIY7   N6UEU1   A0A2M3ZEZ4   A0A0P5L001   U4USR7   E9GY15   A0A182NKP0   B7QBK7   E0W0P0   A0A0P5BDH2   A0A026WMB6   A0A0P5LC60   A0A0N8E7Q6   A0A0P6CXM5   A0A2M3ZF06   A0A2M4CMG4   A0A1E1XA71   A0A0N8E275   A0A158NQ51   A0A182K058   A0A182KQU1   Q7QJ50   A0A182P218   A0A182I2V9   Q16S75   A0A182WZ47   F4WMS0   A0A182J2B0   A0A182UNZ3   A0A224YSV1   A0A1L8DQQ4   A0A1L8DQV4   A0A087TY18   A0A154PJQ2   A0A1S4FRE8   A0A131YJQ4   A0A232EVD8   A0A182UBR0   V5HAZ2   A0A088ADU2   T1IV28   A0A182Q4I5   A0A2A3E214   V9IE27   A0A158NQ52   A0A0L8GA35   A0A2M3ZI85   K1QFV3   A0A0L7R9D7   A0A0P5TTK4   A0A162S5I2   A0A0P5JDS0   A0A0P5SHC3   K7J648   H2ZMP0   H2ZMP2   A0A0P5MXY7   B0W3T8   A0A0P4VTZ8   A0A0P5XZP7  

Pubmed

19121390    26354079    22651552    18362917    19820115    28004739    + More
22516182    24845553    25765539    25244985    20920257    23761445    21292972    30375419    26227816    20798317    26483478    26694822    23537049    20566863    24508170    30249741    28503490    21347285    20966253    12364791    14747013    17210077    17510324    21719571    28797301    26830274    28648823    22992520    20075255   

EMBL

BABH01024524    NWSH01007210    PCG63037.1    KC832290    AGQ53950.1    ODYU01010888    + More
SOQ56273.1    KQ461175    KPJ07863.1    AK401551    BAM18173.1    KQ459302    KPJ01751.1    RSAL01000003    RVE54833.1    KQ971321    KYB28627.1    GEZM01087890    JAV58415.1    KPJ01750.1    BT128059    AEE63020.1    GALX01004282    JAB64184.1    KK852529    KDR21959.1    GANP01012465    JAB72003.1    GANP01014931    JAB69537.1    GANP01003912    JAB80556.1    KQ435828    KOX71867.1    GDIQ01148777    JAL02949.1    ADMH02000578    ETN65790.1    GDIP01143602    LRGB01000872    JAJ79800.1    KZS15372.1    GL732605    EFX71905.1    REGN01004207    RNA18598.1    EFA00166.1    GDIP01107794    JAL95920.1    JTDY01000854    KOB75665.1    GL445556    EFN89423.1    GGFJ01005259    MBW54400.1    AXCM01001909    NEVH01007815    PNF35620.1    AJWK01008050    KQ769940    OAD52751.1    KYB28628.1    JXUM01039705    KQ561215    KXJ79327.1    GGFJ01005026    MBW54167.1    KU218694    ALX00074.1    APGK01037834    KB740949    ENN77167.1    GGFM01006331    MBW27082.1    GDIQ01184770    JAK66955.1    KB632347    ERL93145.1    GL732574    EFX75639.1    ABJB010297592    ABJB010583610    DS902098    EEC16229.1    DS235862    EEB19196.1    GDIP01186735    JAJ36667.1    KK107167    QOIP01000010    EZA56254.1    RLU17743.1    GDIQ01171858    JAK79867.1    GDIQ01053620    JAN41117.1    GDIQ01086160    JAN08577.1    GGFM01006332    MBW27083.1    GGFL01002326    MBW66504.1    GFAC01003035    JAT96153.1    GDIQ01069068    JAN25669.1    ADTU01022963    AAAB01008807    EAA04031.4    APCN01000188    CH477680    EAT37340.1    GL888218    EGI64547.1    GFPF01005918    MAA17064.1    GFDF01005302    JAV08782.1    GFDF01005303    JAV08781.1    KK117271    KFM70007.1    KQ434938    KZC12089.1    GEDV01009759    JAP78798.1    NNAY01002011    OXU22311.1    GANP01003913    JAB80555.1    JH431572    AXCN02000549    KZ288497    PBC25179.1    JR041212    AEY59383.1    KQ423006    KOF73758.1    GGFM01007482    MBW28233.1    JH815850    EKC35757.1    KQ414627    KOC67449.1    GDIP01139748    JAL63966.1    LRGB01000084    KZS21030.1    GDIQ01206863    JAK44862.1    GDIP01198345    GDIP01139747    JAL63967.1    GDIQ01149679    JAL02047.1    DS231833    EDS32234.1    GDRN01110869    JAI56851.1    GDIP01064963    JAM38752.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000007266    + More
UP000027135    UP000053105    UP000076408    UP000000673    UP000076858    UP000000305    UP000276133    UP000037510    UP000075901    UP000008237    UP000069272    UP000075883    UP000075920    UP000235965    UP000092461    UP000075900    UP000069940    UP000249989    UP000019118    UP000030742    UP000075884    UP000001555    UP000009046    UP000053097    UP000279307    UP000005205    UP000075881    UP000075882    UP000007062    UP000075885    UP000075840    UP000008820    UP000076407    UP000007755    UP000075880    UP000075903    UP000054359    UP000076502    UP000215335    UP000075902    UP000005203    UP000075886    UP000242457    UP000053454    UP000005408    UP000053825    UP000002358    UP000007875    UP000002320   

PRIDE

H9JBL0   

Pfam

PF16757   Fucosidase_C        + More
PF01120   Alpha_L_fucos
PF10545   MADF_DNA_bdg

Interpro

IPR000933   Glyco_hydro_29        + More
IPR031919   Fucosidase_C       
IPR017853   Glycoside_hydrolase_SF       
IPR013780   Glyco_hydro_b       
IPR016286   FUC_metazoa-typ       
IPR006578   MADF-dom       
IPR018526   Glyco_hydro_29_CS       
IPR000242   PTPase_domain       

SUPFAM

SSF51445   SSF51445       

Gene 3D

2.60.40.1180    

ProteinModelPortal

H9JBL0   A0A2A4ISS5   S5G3E0   A0A2H1WT93   A0A194QQT1   I4DJT3   + More
A0A194QE59   A0A3S2PLH2   A0A139WLC8   A0A1Y1KFM4   A0A194Q9R1   J3JXT8   V5GJB8   A0A067RQD7   V5HEY6   V5H5I0   V5II28   A0A0M8ZVM1   A0A0P5N9Z1   A0A182XYI1   W5JS94   A0A0P5EPC0   E9H8P9   A0A3M7R5S5   D6WGK5   A0A0P5VYW7   A0A0L7LJS9   A0A182T8J7   E2B4G2   A0A182FG61   A0A2M4BMU3   A0A182MTE9   A0A182WJM1   A0A2J7R465   A0A1B0CDN8   A0A310S8R9   A0A182RTY3   A0A139WKN6   A0A182G2D9   A0A2M4BM62   A0A0U4CIY7   N6UEU1   A0A2M3ZEZ4   A0A0P5L001   U4USR7   E9GY15   A0A182NKP0   B7QBK7   E0W0P0   A0A0P5BDH2   A0A026WMB6   A0A0P5LC60   A0A0N8E7Q6   A0A0P6CXM5   A0A2M3ZF06   A0A2M4CMG4   A0A1E1XA71   A0A0N8E275   A0A158NQ51   A0A182K058   A0A182KQU1   Q7QJ50   A0A182P218   A0A182I2V9   Q16S75   A0A182WZ47   F4WMS0   A0A182J2B0   A0A182UNZ3   A0A224YSV1   A0A1L8DQQ4   A0A1L8DQV4   A0A087TY18   A0A154PJQ2   A0A1S4FRE8   A0A131YJQ4   A0A232EVD8   A0A182UBR0   V5HAZ2   A0A088ADU2   T1IV28   A0A182Q4I5   A0A2A3E214   V9IE27   A0A158NQ52   A0A0L8GA35   A0A2M3ZI85   K1QFV3   A0A0L7R9D7   A0A0P5TTK4   A0A162S5I2   A0A0P5JDS0   A0A0P5SHC3   K7J648   H2ZMP0   H2ZMP2   A0A0P5MXY7   B0W3T8   A0A0P4VTZ8   A0A0P5XZP7  

PDB

2ZXD     E-value=1.30568e-63,     Score=617

KEGG

101743490    K01206 alpha-L-fucosidase [EC:3.2.1.51] | (RefSeq) putative alpha-L-fucosidase

PATHWAY

00511    Other glycan degradation - Bombyx mori (domestic silkworm)

GO

GO:0004560   GO:0006004   GO:0008152   GO:0016798   GO:0005764   GO:0016139   GO:0004725   GO:0005975   GO:0000287   GO:0051287   GO:0005216   GO:0006811   GO:0006541   GO:0016812   GO:0016597  

PANTHER

PTHR10030  

SignalP

Position:   1 - 15,         Likelihood:  0.972223

 

 

Length:

477

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05491

Exp number, first 60 AAs:

0.02885

Total prob of N-in:

0.00144

outside

1  -  477

 

 

Pi

183.232949

Theta

205.746885

Tajima's D

-0.378315

CLR

0.461391

CSRT

0.269036548172591

Interpretation

Possibly Positive selection