SGID The Silkworm Genome Information Database
Gene
KWMTBOMO05831
Annotation
Uncharacterized_protein_OBRU01_22774_[Operophtera_brumata]
Location in the cell
Mitochondrial   Reliability : 1.616 PlasmaMembrane   Reliability : 1.285
 

Sequence

CDS
ATGGTTTCTAAAGTATTAGTAGGAATTTATGTAAATATGGAAAAATCATTAAGAGCCGCAGGAGTAATAGCCGGGAAGTCTGGGCGGCATATGAAATATCCATACACACTGTCAGCAAAAATAGCGCAATTTCCTTTGTTCTATTATATGAAGAATAATATCATATGGATGTACTATCCTCTTGGGATTTTAACGGGGTTTTATTTTTTCATGAAAATTCATGTGATTGTTAATTCAGATGAAAATAAGCGTAGTTGGGCTGAATCGCAAAGAAAGATTGCAGAAAAAGAAGCCCACCATTGA
Protein
MVSKVLVGIYVNMEKSLRAAGVIAGKSGRHMKYPYTLSAKIAQFPLFYYMKNNIIWMYYPLGILTGFYFFMKIHVIVNSDENKRSWAESQRKIAEKEAHH

Summary

EMBL
JTDY01007180    KOB65403.1    RSAL01000150    RSAL01000003    RVE45767.1    RVE54835.1    + More
JTDY01008319    KOB64626.1    ODYU01012206    SOQ58387.1    AGBW02006825    OWR55188.1    CH940648    EDW62010.1    CH954179    EDV56797.1    CH916367    EDW01059.1    CM000158    EDW92319.1    CH480824    EDW56941.1    CM000362    CM002911    EDX08363.1    KMY96021.1    AE013599    AAM68247.1    AAM68248.1    CH964282    EDW85620.1    KRG00259.1    KRG00260.1    CH902619    EDV36625.1    KPU76323.1    KQ971352    EFA07232.1    GAIX01009067    JAA83493.1    CVRI01000021    CRK91645.1    GAMC01000696    JAC05860.1    CP012524    ALC41706.1    NWSH01001542    PCG70914.1    KK852643    KDR19571.1    GGFM01002727    MBW23478.1    GGFK01008366    MBW41687.1    CM000071    EAL25621.1    CH479183    EDW36011.1    OUUW01000001    SPP74765.1    KQ460205    KPJ17018.1    AGBW02011278    OWR46903.1    GGFJ01011348    MBW60489.1    ADMH02000199    ETN67393.1    KQ459604    KPI92103.1    JH432201    GAMD01000888    JAB00703.1    RSAL01000216    RVE44115.1    GAMD01000821    JAB00770.1    GGFJ01011307    MBW60448.1    AY603591    UFQS01005558    UFQT01000056    UFQT01005558    AAU06505.1    SSX16849.1    SSX19133.1    KZ150248    PZC71854.1    AK401623    BAM18245.1    AXCN02002161    ATLV01015187    KE525003    KFB40169.1    AAAB01008847    EAA06789.5    APCN01001073    GGFL01004198    MBW68376.1    ODYU01003717    SOQ42844.1    CCAG010015535    GGFM01003168    MBW23919.1    GGFK01006573    MBW39894.1    JRES01000501    KNC30718.1    AK417848    BAN21063.1    AJVK01029484    EU035823    ABV44725.1    GGFK01006578    MBW39899.1    JTDY01004391    KOB68217.1    ADMH02000018    GGFL01001085    ETN68074.1    MBW65263.1    GFDG01001469    JAV17330.1    GDAI01001429    JAI16174.1    BABH01034238    BABH01034239    APGK01052043    KB741208    KB631654    ENN72863.1    ERL85069.1    GFDF01009862    JAV04222.1    GFDG01001471    JAV17328.1    GANO01005042    JAB54829.1    EZ048853    ACN69145.1    AJWK01022496    PYGN01000005    PSN58245.1    NEVH01008200    PNF34909.1    GALA01000361    JAA94491.1    GEZM01087141    JAV58889.1    DS232072    EDS33911.1    JXUM01047486    KQ561521    KXJ78294.1    GBBK01001438    JAC23044.1    CH478175    EAT33686.1    EJY58079.1    KQ971371    KYB25533.1    GFDL01007209    JAV27836.1    AAAB01008807    EAA45407.3    APCN01000217    GBBK01001437    JAC23045.1    GDKW01002346    JAI54249.1   

Ontologies

Topology

Length:
100
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.86914
Exp number, first 60 AAs:
6.98823
Total prob of N-in:
0.13444
outside
1  -  53
TMhelix
54  -  76
inside
77  -  100
 
 

Population Genetic Test Statistics

Pi
295.190036
Theta
192.672541
Tajima's D
1.674564
CLR
0
CSRT
0.823558822058897
Interpretation
Uncertain
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