SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05821
Pre Gene Modal
BGIBMGA006948
Annotation
PREDICTED:_uncharacterized_protein_LOC101742673_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.885
 

Sequence

CDS
ATGGTAGTGAAAAAGAATTGGCGTAAAATTGAAATAATCAGGAAAACTTCAAAATCTGAAAAGTCGGGCGATTCGTGGACCTTCTTGGGTTCTAAAGCTGTGATCGTTTGTCCTGTTAAATTAGTAAAAATGCAGACGAAACAGCCCATAACAAGACAAATTGCCATAAATACCCTTGCGGCTATGCACAGAAGATTCAGTTTGCCAGGACCAGTGCAACCGCATTCAAGGCCTATATCAGAATTCAGGGCCAGTGCCAACAAGTCTTTGGATATGCTACGTCAAACCATACAATCTGCAGTTACTAGGGAAATTGACCAAGTGATCAAAAAATATTTAGAGAAATTCTTTGTGCCAGCAGTAAATAATATAAGACTGAATTTGGGAGACGAATCTGTCAGTGAGGACCAGGTTCGTGCTGTGTGCAGGGCAATGCTGGACGCCACACGTTTGCTATACACAACTCCAGCGCGAACAGTACCATGTCCATATGAAAGTAGTGAATCAGAAGCGTTAGAAACCAAATTCAGCAAGCAATTGCAAAGTACACTACAGTATAAAAGAAAAGATTCAGAGATTGAGACAGATCTATTTGCCAAACGGAAGAAGATTAAACAAGAAGATAATACTGACAGTGCTTCCTCTTCACCATTGCCTTCACCAGCATTAAGAGATCCAGAAAAGTGGAACCCAGATCGACTTACGCAAGATACGCTGTTTATTATGGGATCTCATGCACATAAGGTTCTTGGATTGGGCAACTCACGTGGACGGTTATACACGCGGCACTCTAGTTTACCAAGGTACCCCGCCGATAGCATAGACAAGGAATGGATTGCTAATCACAATTTAGCGAATGCTGTTGGTGGAAAGACTTACATAATGGTTTTAGAAGATATTGAGGAATTGGCACACAGTGAAGCTTACAAACACAGTTCTTTACCAATGCTTGGTGAATTATCTGGATTCAAAGTACCTCAGTTCATGTTAAAAAAAATTAAGTCATATGTAGTGAAATGTGTCTTGAGTGAAGACATCAGTAATACAAGTAGTCCACAACCATCTACAAGTAGTGTGCAAGATGATGATAAATTCAAAGATATTAAAATTGAAGCACCTGAGACTTTTGATGCGAATTTCAATGCGAGCCATTACATAACTGGTAGCGAGAACTCCAGAGATTTCTCTGATGTAATGAAAGATGACAGTGATTTCTCTGACATCAAAGTTGAGGACATTGATGATATAAAAGTGGAACAGATAAAAGTCGAAGATTTGGATGATATTAAAGTTGATGCTATAAAAGTTGAGGGTTTGAACGTGGGCGGTATTAAAGTCGAGAACATTGACGGCATTAATGTAGACGAAATCAAGGTTGAAGACATCAAATTAGAGAACGACGACACCTTTGATCTTTGTAAACAAGACGATGATCAGAGTCATTTGGTTGATGGTCTGTTGGATTCAGACATTGAGTTTTTGAGCCGTAATCTCGGAAACATTGAAAGCGAAACAGATGCGAGGAAGACCATAGAGAAATTGACTGGCGCTAATGCCGATACGATAACTTTAGTCGGAGATGAATTCGATCTGGGTTCGACGTTGAACACAAACTTTTCAGGTAATCAAACGAAGTGCATCACTGTGGCGTCGACGACCAGTGGCATGGTTCACAGCGTGCCGGTCGCGCACATCGCGGCGCCGCCTCGCATCACGGGCAGCACCCTGCATTACTACACCAGCTCCGCGCCGCACGTGACGCACGGGCCGCACGTGACGCACGCGCCGCAACGGACCGTGCACCATCTGCCGCAAGCCACCGTCACCATACAGAGCATCCCGGGCTCGGCATCGCAGATGATACGAGGAATACCAATCAACACGAAAACTGGAACTTTCAGTACAGTTATGTCGCAAGGCGGAGGGAACACTATAATTGGTTTCGGTACGCGTACACCGAACGCGACAATAATTGGGACCCCGCAGTATGTGAACGTTTCATCTAAATCATTTCCCACTGGCAACATCTTGCATAACGCTATCGTGTCGAGGAACATCATAAACCGTTCAAACTTGGCCGCCGTGACGTCCGGTGTGACGTTCAACGTGACGACGGTAAGGCCCGCGTCGCAAACAACCACGCCCAAAATAAGCACGGCGGTCTCGACTAGTTCAGACTTCGACAGTATCTCCACTACGAAGGACATGATCGATAATGCCTGCAATTCATCGGTTATGTTGAAAAAGGTACTAACCCTCGGCAGTACTGGTGGGGCGAAGTCGTTTGTTATGCATAATACGCAAAAAGTTTTGTCTACCGGTTTCGCTAGCGGCTCGACGCCTCCGCCGAATGTGACTATAGTCAGTTCTGGCGGTGGCCCTCTCGGTCATTCCACGTCTAATATTTTGAGCGCGACTTCTGGCACTCTGAGCGCTACGCACGCTACCTTGTCGGCTTTATTAGCTTCGAACGCTGAAAACGCCAAAAAAGGCAACAAAAAATGA
Protein
MVVKKNWRKIEIIRKTSKSEKSGDSWTFLGSKAVIVCPVKLVKMQTKQPITRQIAINTLAAMHRRFSLPGPVQPHSRPISEFRASANKSLDMLRQTIQSAVTREIDQVIKKYLEKFFVPAVNNIRLNLGDESVSEDQVRAVCRAMLDATRLLYTTPARTVPCPYESSESEALETKFSKQLQSTLQYKRKDSEIETDLFAKRKKIKQEDNTDSASSSPLPSPALRDPEKWNPDRLTQDTLFIMGSHAHKVLGLGNSRGRLYTRHSSLPRYPADSIDKEWIANHNLANAVGGKTYIMVLEDIEELAHSEAYKHSSLPMLGELSGFKVPQFMLKKIKSYVVKCVLSEDISNTSSPQPSTSSVQDDDKFKDIKIEAPETFDANFNASHYITGSENSRDFSDVMKDDSDFSDIKVEDIDDIKVEQIKVEDLDDIKVDAIKVEGLNVGGIKVENIDGINVDEIKVEDIKLENDDTFDLCKQDDDQSHLVDGLLDSDIEFLSRNLGNIESETDARKTIEKLTGANADTITLVGDEFDLGSTLNTNFSGNQTKCITVASTTSGMVHSVPVAHIAAPPRITGSTLHYYTSSAPHVTHGPHVTHAPQRTVHHLPQATVTIQSIPGSASQMIRGIPINTKTGTFSTVMSQGGGNTIIGFGTRTPNATIIGTPQYVNVSSKSFPTGNILHNAIVSRNIINRSNLAAVTSGVTFNVTTVRPASQTTTPKISTAVSTSSDFDSISTTKDMIDNACNSSVMLKKVLTLGSTGGAKSFVMHNTQKVLSTGFASGSTPPPNVTIVSSGGGPLGHSTSNILSATSGTLSATHATLSALLASNAENAKKGNKK

Summary

Pfam
PF18192   DNTTIP1_dimer
Interpro
IPR026064   TdIF1        + More
IPR041384   DNTTIP1_dimer       

Ontologies

Topology

Length:
834
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.25641
Exp number, first 60 AAs:
0.03969
Total prob of N-in:
0.00278
outside
1  -  834
 
 

Population Genetic Test Statistics

Pi
146.941594
Theta
151.336009
Tajima's D
0.139251
CLR
12.374152
CSRT
0.403429828508575
Interpretation
Uncertain
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