Silkworm Genome Informatics Database

Gene

KWMTBOMO05819

Pre Gene Modal

BGIBMGA006947

Annotation

PREDICTED:_uncharacterized_protein_LOC105842971_[Bombyx_mori]

Location

Bomo_Chr10(+):10788621-10791765 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.429

CDS

ATGCCTCGAAATTATAAACCGAATCCACGTGGTAAGCAGTATCGCAAATACGATGATGCTACAATTAAGCAAGCTTTGGAAGTATACAATACCACTCCAAATTGTTCAATATCTGTCATTGCAAAACAGTACAACATTAATAAATCAGTTTTATATCGGCATAATAGAAAAACAATGAAAAAGCAAGGTGGGCAAACTGCTTTAGACGATGACACAGAACATCACATTGTACAGTATTTAAATGTTTGTAGTGATTGGGGCTATCCATTAGACACATATGATTTAAGAATAATGGTGAAATTGTATTTGGATAATATGGGTATCACTCATAACCGTTTCAAAGATAATATGCCAGGGCCAGATTATGCCACAAGATTTTTAAAAAGGCACAAAGATTCCATTTCTTTGAGATTATGTCAAAATATTAAAAAATCAAGGGCTCGAGTATCGCCCGATACTATCGAAGAATATTTTGGAGAGTTGGAAGAGACATTAAAAGAAATCGACCCAAACAATATCGTCAATTACGATGAAACAAATCTCAGTGATGATCCTGGGCGAAAAAAGGTAATTGTTAAAAGGGGAACCAAGTACCCTGAAAGGGTACTTAATCAATCAAAATCATCCATATCAATTATGATGGCTGGTACAGCAGCAGGAGTGCTTTTACCTCCTTATGTAATTTATAAAGCTAGTAATGTTTATGACTCCTGGACCACAGGTGGACCCAAAGGAACGCGGTATCATAGAACTGCATCTGGATGGATTGATGGTAACACGTTCGAAGATTATATTAAATGCATTATAATACCATTCTTTAAAGATAAACCAGGAAGAAAAATACTGATTGGGGATAATTTATCATCCCATTTGTCTATAGAGGTAATTAAAATTTGTGAAGAGAATCATATTTCATTTGTTTTTTTACCGGCCAATTCGACACATTTGACACAACCTCTGGATATCGCCTTCTTTAGACCGATGAAAATGGCATGGAGAAACATTTTATTACGATGGAAAAAAACAGATGGCAGATCCCAAGCTACAGTACCAAAAGGTTGCTTCCCAAGGTTGTTAAAACTACTTATAAACGAATTGTCAGAAAACGTCGATTCGAACCTTAAAGCAGGTTTTCGAAAAGCAGGGATTATTCCTATTGACCGCAACGAAGTTCTTTCAAGGCTTCCCAAAGAAAACACTGAAGACCCTGAAAAATCGAGATATGCAGTTGACAAGTCCGTTTTAGATATATTAAAAGAAATGCGGTATGGTACCATAAATATCAAAGAACCAGCACATAAAAGTAAAATTAATGTAGATTCTGGCAAGAGCTTGGGAAACATAGATGAGGAAAACTTTGAAACTGAGTCTGAAAACGAAACTACTAGTAAGCGACCAAAGACACGTAAACAAGGCAACAAGAAGAAAAAGATCAAAGTAATTCCAGGAAAAGCAGTCGATTTAAATTCTGAAGATAATAAAACTGAAAATGAAGAACGTAATATAGCTAACACTGAAAATGTAATAAAAAAATATAAGAAGAAAGTGGTGCGGGCACCCAAATGCAAGATAAATAGTAAGAAAAAAGAAGTAAAAACTCTAATAGACAAGTTAAAAACGGATTTGATGAAGAAAGAGATGGAAACGAATACGGGGACACCAAAATATAACGAAACAAAAAAAATAGATGTAAGTGTATTACCAATGGTATGTGTTGATGAATGTATTATTGCCAGTTGCTCAGAAAATACTAATAATACTTGCAATGATTTAAATCACAAAAAGAACTATGAAGAAGTAATTGACAATAACTGCAATAGTTACAAAGAATCATTTCATCAAGAAAATAATTTTGAAGATTATTGGGGCAATGGTTCGCAACAAAAAGATGATGAACTGTTTGTTAACACCTACTTTGATAAAGATGTAGCAAACGAAGATTATGTTCCAGACATAGTAACAGAAAACATATTTCACGAATTAATAGACCCCCTAAAAGATGGGGTATGTGTAAATTATAACAGCTATGCAGCAGAAGCAACAGCAGAAAACAATAATTCCAAAGATAAAAAAATCGCTATTATTTCTGTAGAAAATGTTGATAGTGATAGTCGTCCGGTAACTCTAAATAAGTGTAAAAAAATATCTTTAAATTCCATAGTTAGCGTTAAAAAAGATAACAGCCAGAACTCCAAAAACATAAAACAAGTTAAAAGTAAATTACGCAGAAGAAGCTATTACAAAAATGAGGCTGATATTTTAAGAGATTTGATTGATGACAATATTCAATAA

Protein

MPRNYKPNPRGKQYRKYDDATIKQALEVYNTTPNCSISVIAKQYNINKSVLYRHNRKTMKKQGGQTALDDDTEHHIVQYLNVCSDWGYPLDTYDLRIMVKLYLDNMGITHNRFKDNMPGPDYATRFLKRHKDSISLRLCQNIKKSRARVSPDTIEEYFGELEETLKEIDPNNIVNYDETNLSDDPGRKKVIVKRGTKYPERVLNQSKSSISIMMAGTAAGVLLPPYVIYKASNVYDSWTTGGPKGTRYHRTASGWIDGNTFEDYIKCIIIPFFKDKPGRKILIGDNLSSHLSIEVIKICEENHISFVFLPANSTHLTQPLDIAFFRPMKMAWRNILLRWKKTDGRSQATVPKGCFPRLLKLLINELSENVDSNLKAGFRKAGIIPIDRNEVLSRLPKENTEDPEKSRYAVDKSVLDILKEMRYGTINIKEPAHKSKINVDSGKSLGNIDEENFETESENETTSKRPKTRKQGNKKKKIKVIPGKAVDLNSEDNKTENEERNIANTENVIKKYKKKVVRAPKCKINSKKKEVKTLIDKLKTDLMKKEMETNTGTPKYNETKKIDVSVLPMVCVDECIIASCSENTNNTCNDLNHKKNYEEVIDNNCNSYKESFHQENNFEDYWGNGSQQKDDELFVNTYFDKDVANEDYVPDIVTENIFHELIDPLKDGVCVNYNSYAAEATAENNNSKDKKIAIISVENVDSDSRPVTLNKCKKISLNSIVSVKKDNSQNSKNIKQVKSKLRRRSYYKNEADILRDLIDDNIQ

Uniprot

H9JBQ2

Pubmed

19121390

EMBL

BABH01024482

Proteomes

UP000005204

PRIDE

H9JBQ2

Pfam

PF03184 DDE_1

Interpro

IPR004875 DDE_SF_endonuclease_dom

ProteinModelPortal

H9JBQ2

KEGG

105842971 no KO assigned | (RefSeq) uncharacterized LOC105842971

GO

GO:0003676 GO:0008152 GO:0004190 GO:0006508 GO:0015074 GO:0005216 GO:0006811 GO:0006541 GO:0016812 GO:0016597

Length:

763

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.973

Exp number, first 60 AAs:

0.00244

Total prob of N-in:

0.04606

outside

1 - 763

Pi

187.987158

Theta

163.464504

Tajima's D

0.246923

CLR

0.024226

CSRT

0.441077946102695

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree