Silkworm Genome Informatics Database

Gene

KWMTBOMO05815

Pre Gene Modal

BGIBMGA008693

Annotation

PREDICTED:_uncharacterized_protein_LOC105389752_[Plutella_xylostella]

Location

Bomo_Chr10(-):10710992-10712350 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.949

CDS

ATGTCTTCAGAAAGTGATGGTGATGAAGACGGGTCTAAAAAGTCACCCGTAGACTTGAAAAAGAGGCGATTAGATACTATAAAATCGAACGATGTCGATAAGTATAAACCTTACTCTAAACCAGATTATAAGCGATCCTATCCGGATAATAGTAATAAAGAAGAGTTCCCCGTTTACGTACAGGGAATTAAACCGGAAGATAAGATCGGTAATAAAAATCCTTTGCAATTGTCAAACATTTTCAAAAACGTGAAGGGCATCAAGGAATGTCGTCGAATTAATGCGGCCAAAATTATGCTGGTTTTCAAACAAGCTGCAGCTGCCAATGATTTTCTGAGTCACGTGAGCTTACGTGACAATAATATGAAAGCTTTTGTACCAGCCTCTTCGGTGGAGCGAGTGGGTAAAATTCGTTTTATCCCGAAGGAATGCAGTAACGCGGATTTATACCACAAACTAATGGCAGACTCTGAAATTGTTGGTGTTAGACGTTTTATGAAAAGAACTGGTGATGGTCTGGAACCCCTCACTACTATAAGCGTTACCTTTGTAGGAACTGTTCTCCCTCAGTATGTTTATTTAGACAACTGGCGTTACAGAGTTTTCACTTACATTCCTCCTCTGATGCAATGTTTTAAATGCATGGGATTTAGACACAGTGCCAAAGTATGTCGAAACGATCAGGTATGTTCAAAGTGTTCAGGTGGTCATTCCTATAAGGAATGCTCAGCTGAATTTTTGAAGTGTGTTAACTGTGGAGGAGACCACTTGGCAGTATCCAGGTTTTGTCCTCAAAAAGCGGCTCAGATTAAAAAACATGAGAATAATTATTCATCTAAAATGTATTCAACTGTATTATTGTCAAGTGATTTTCCTCCGTTGTTACCTAATGATAAATCAGTTGTAAAGTTAGCTCACAATAAATTAGCTCCATCTACTGTCCAACCTAAGAAACAAAAGTTATCACAAAATTCTTCACATAGCTCAACTGCAGTCCAGTCTGCTCCTTCTAATATTGGTTCTTATGATCAGCTCATTAAAGATGATCAGTTCTTGAGTAAAATTATCAAAACTTTAGTTATGTTAGGCAATTCTAATACAGCAAACACAACTGCTCACATTAAGGAGATCTTAATTCAAAACTTAACAAAATAA

Protein

MSSESDGDEDGSKKSPVDLKKRRLDTIKSNDVDKYKPYSKPDYKRSYPDNSNKEEFPVYVQGIKPEDKIGNKNPLQLSNIFKNVKGIKECRRINAAKIMLVFKQAAAANDFLSHVSLRDNNMKAFVPASSVERVGKIRFIPKECSNADLYHKLMADSEIVGVRRFMKRTGDGLEPLTTISVTFVGTVLPQYVYLDNWRYRVFTYIPPLMQCFKCMGFRHSAKVCRNDQVCSKCSGGHSYKECSAEFLKCVNCGGDHLAVSRFCPQKAAQIKKHENNYSSKMYSTVLLSSDFPPLLPNDKSVVKLAHNKLAPSTVQPKKQKLSQNSSHSSTAVQSAPSNIGSYDQLIKDDQFLSKIIKTLVMLGNSNTANTTAHIKEILIQNLTK

Uniprot

A0A3S2LWP0 A0A0N0PAN6 A0A151IS80 V5I8C7 A0A0L7L376 A0A147BAM1 + More

Pubmed

26354079 26227816 29652888

EMBL

RSAL01000152 RVE45705.1 KQ458678 KPJ05494.1 KQ981093 KYN09537.1 + More
GALX01004915 JAB63551.1 JTDY01003230 KOB69917.1 GEGO01007575 JAR87829.1

Proteomes

UP000283053 UP000053268 UP000078492 UP000037510

Pfam

PF00078 RVT_1 + More
PF00098 zf-CCHC

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf
IPR000477   RT_dom

SUPFAM

SSF57756 SSF57756

ProteinModelPortal

A0A3S2LWP0 A0A0N0PAN6 A0A151IS80 V5I8C7 A0A0L7L376 A0A147BAM1 + More

KEGG

105841580 no KO assigned | (RefSeq) uncharacterized LOC105841580

GO

GO:0016021 GO:0008270 GO:0003676 GO:0003964

Length:

384

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.10527

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06376

outside

1 - 384

Pi

305.652722

Theta

187.223576

Tajima's D

1.685417

CLR

34.841014

CSRT

0.825958702064897

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree