SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05812  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006946
Annotation
caspase-1_[Bombyx_mori]
Full name
Caspase-1       + More
Caspase      
Alternative Name
drICE
Location in the cell
Extracellular   Reliability : 1.785 Nuclear   Reliability : 1.308
 

Sequence

CDS
ATGGCTGATGAAGAAAAGAAAAACAATGGCTCTGGAACAGAACAAAGGAAAAACGGCAACGAAGACGAAGGCGACGCATGGGGCAGTCATGGATCTTCACAAGGGCGACGTTATGCGAAAATGCCTGTCGAAAGATATGCTCATTACTATAACATGAACCACAATAATCGTGGTATGGCGATCATTTTCAATCATGAACATTTTGAAATTCATAATCTAAAATCTCGCACGGGCACCAATGTGGACAGTGACAGCTTATCTAAAGTCCTGAGAGGCTTAGGTTTCAGTGTTACTGTTCTTCATAACCTAAGAGCTGAAGATATCAACAGATATATACAACAGATATCTGAAATGGATCACACAGATAATGATTGTCTGCTGGTTGCTGTGTTGAGTCATGGAGAATTAGGTATGTTGTATGCCAAAGACACTCATTATAAACCAGATAATCTGTGGTATTACTTCACTGCTGATAAATGTCCAACTCTAGCTGGAAAACCAAAGCTGTTCTTTATTCAAGCTTGCCAAGGTGATAAGTTAGATGGTGGAATAACATTATCCAACACTGAAACAGATGGTTCTTCGTCTTCATCCTACAGAATCCCAATTCATGCTGACTTTTTGATTGTGTTCTCAACGGTACCAGGTTATTACTCTTGGAGAAACACAACTCGTGGCTCTTGGTTTATGCAATCTCTTTGTGAAGAATTGAGAAACTATGGTACTCAAAGAGATATTCTTACACTCTTGACATTTGTTTGTCAGAGAGTTGCTTTAGATTTTGAGTCAAATACACCAGATATCACACCGATGCATCAACAAAAACAGGTACCTTGCATAAATAGTATGCTGACACGCCTTCTCTTGTTTGGAAAAAAATAA
Protein
MADEEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDINRYIQQISEMDHTDNDCLLVAVLSHGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDKLDGGITLSNTETDGSSSSSYRIPIHADFLIVFSTVPGYYSWRNTTRGSWFMQSLCEELRNYGTQRDILTLLTFVCQRVALDFESNTPDITPMHQQKQVPCINSMLTRLLLFGKK

Summary

Description
Involved in the activation cascade of caspases responsible for apoptosis execution (By similarity). Inhibited by the baculovirus anti-apoptotic protein p35. Cleaves p35 and nuclear immunophilin FKBP46.
Subunit
Heterotetramer that consists of two anti-parallel arranged heterodimers, each one formed by a 19/18 kDa (p19/18) and a 12 kDa (p12) subunit.
Heterotetramer that consists of two anti-parallel arranged heterodimers, each one formed by a 21 kDa (p21) and a 12 kDa (p12) subunit. Inactive pro-form can homodimerize. Dronc and Drice can form a stable complex (PubMed:10675329). Interacts with Diap2 (via BIR3 domain) to form a stable complex (PubMed:18166655).
Similarity
Belongs to the peptidase C14A family.
Keywords
3D-structure   Apoptosis   Direct protein sequencing   Hydrolase   Protease   Thiol protease   Zymogen   Complete proteome   Reference proteome  
Feature
chain  Caspase-1 subunit p19/18
EC Number
3.4.22.-
EMBL
BABH01024476    AF448494    AAN86250.1    HM234675    AEF30493.1    GDQN01002016    + More
JAT89038.1    FJ266474    ACI43910.1    JQ864206    AFJ97219.1    AY159381    AAO17788.1    HM234680    AEF30498.1    EF688063    HQ645847    ABS18284.1    AEH16632.1    JN113041    AEK12771.1    EF190236    ABO93468.1    HQ328953    AEK20810.1    EF211965    ACU11588.1    HQ328952    AEK20809.1    JTDY01004421    KOB68178.1    AB755808    BAM62940.1    JN794535    AFA43940.1    AF548387    AAO16241.1    KQ461175    KPJ07838.1    NWSH01000730    PCG74557.1    KQ459302    KPJ01774.1    ODYU01003219    SOQ41673.1    U81510    HM204505    ADK24087.1    GAIX01004462    JAA88098.1    HQ328949    AEK20806.1    JF798683    AEQ18745.1    AGBW02012322    OWR45225.1    JN410830    AEP25406.1    HQ328950    AEK20807.1    AB755807    BAM62939.1    HQ328948    AEK20805.1    JF906728    AEH76885.1    HQ328951    AEK20808.1    GDAI01000733    JAI16870.1    NNAY01001601    OXU23463.1    KQ434878    KZC09894.1    Y12261    AE014297    AY058451    AJVK01028708    AJVK01035047    CH480819    EDW53408.1    UFQT01001457    SSX30638.1    CM000364    EDX14899.1    GBYB01009880    JAG79647.1    GFDL01014948    JAV20097.1    QOIP01000003    RLU24837.1    GL438128    EFN69540.1    CH964232    EDW81185.1    DS231818    EDS41304.1    CH933806    EDW16773.1    CM000160    EDW98249.1    KQ971328    EFA01345.2    CH940650    EDW67339.1    KYB28363.1    CCAG010010758    KF955542    KF955543    KZ288416    AIS23518.1    AIS23519.1    PBC26031.1    GL445671    EFN89257.1    EZ422185    ADD18379.1    NEVH01024980    PNF16221.1    JXJN01007738    GL888120    EGI66994.1    OUUW01000005    SPP81055.1    KX463639    ANQ91917.1    JXUM01003922    JXUM01003923    KQ560165    KXJ84059.1    CM000070    EAL28120.3    AXCM01000181    CP012526    ALC46917.1    CH902617    EDV43814.1    CH479179    EDW24202.1    KQ980159    KYN17427.1    ATLV01013118    KE524840    KFB37245.1    AXCN02001449    CVRI01000063    CRL04900.1    GL762102    EFZ22232.1    GAMD01001223    JAB00368.1    KQ976719    KYM76754.1    LBMM01009157    KMQ88345.1    EU854472    ACF71490.1    KQ983089    KYQ47566.1    CH916373    EDV94389.1    ADMH02001211    ETN63643.1    GGFM01007846    MBW28597.1    GGFK01011728    MBW45049.1    CH954179    EDV56828.1   
Interpro
IPR015917   Pept_C14A        + More
IPR016129   Caspase_his_AS       
IPR029030   Caspase-like_dom_sf       
IPR001309   Pept_C14_p20       
IPR002138   Pept_C14_p10       
IPR002398   Pept_C14       
IPR033139   Caspase_cys_AS       
SUPFAM
SSF52129   SSF52129       
PDB
2NN3     E-value=1.47847e-136,     Score=1244

Ontologies

Topology

Length:
293
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.505399999999999
Exp number, first 60 AAs:
0.00044
Total prob of N-in:
0.10255
outside
1  -  293
 
 

Population Genetic Test Statistics

Pi
235.723211
Theta
154.665156
Tajima's D
1.887408
CLR
1.517568
CSRT
0.861906904654767
Interpretation
Possibly Positive selection
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