SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05810  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006945
Annotation
PREDICTED:_adenylate_kinase_9_isoform_X2_[Amyelois_transitella]
Location
Bomo_Chr10(+):10639231-10653244      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.954
 

Sequence

CDS
ATGCCTCCAAAAAAGGTTGAAGGGCCTGAAAAAAAACCTCTTATTGGAAGAGTGGGAACTAACTTAAAAGTGGGAATAGTAGGTGTTCCCAATGTTGGAAAATCTACATTCTTCAATGTTCTTACCAAGAGTCAAGCAGCAGCTGAAAACTTTCCTTTCTGCACCATCGACCCTAATGAGAATAATAAATATGATGTGTTGGACTCTAATGGTGTCAAAGACATTAAAATAGAGAAAAATGCTACATATAGAGGTCCAATTGATATTATTTATAAACTGGCGAGGCCCATAGAATTCAAACATGGTGTACCATTAGGTGCAACAACAGTAGGGATAAATAACACAGATGCGCCACTTCCAAGAGAAACGAAGTATTATACAGCATGGAATGATTTAGATGCACAAGAAATATACCTCAATACTAAACCAACTTGTTATCTTATAGTTGGTAAGCCTGGTTCCGGTGCCTATTCTCTTGGTGAAGCCTTAGCTAAAAGGTTAAAATGTATTCATTTGTCGCCCTTGACTATACTAAGAGATGAACTCGAACAACAAGGCCCAACTGGAATTTGCCTAGATTTTAATATGCGACATAATATGAAATGCATATTCAATATACTTCTGTTAATTTTAAAAAAGAAACTAGAATCTCCAGTTGTTCAACACAGAGGCTATATATTAACAGGCTTTCCATTAATTAGTAACAAAACTGATTCCCGATTAGTAATAACTTCACAACATGGTGAAGAAGCTCTTAATACATCTTCAGAAATTTGTAATTTTCTTGTAAATAATATAAAAAGAAAAGAAAAGAAAGGCTCTATTGTTCAAAAGACAAATACTTCATCATTCATTGAAATGGAAGAGGAAGAATTAACTGAAACACTTGAAGAGGAACATGAACATGAGGAAGCAATCGAAGAACAGGAAGAATTACCTAAAGAATTTCCAAAATCTATGTTAGAGTTTTGCTCAAACATAGTCTTCAATCAGAAAACCCATATTTGTGATAATGAGTCTACATTTCTAAAGCAATTTGAAGAAATATTTAATTTGGATTTATCACCAGATGTCATTATCAACATTACAAGTCCTGATTGTGATTTGATAACTAAGAAGTCTTCTAAATATTTCAACTATTTAAATAGTCAAATCGTAATGGAGCCATTCAATAATAATCCAGTTTCAGAATCCAGATGGCCATCTAAATACACAGTAAAAGACTTCATTAACCCTTTTGATAGTCATATTTTTAATCCAAAGTACATGTGCAGGCAGCCATACAACTTCAAACTGCATTCAACACAACAAATGTGTAATTATAAAAATACAATAAAATCGGCGATTGACAAAAAACTTGAAGAATATGGTTACAATGCTATAAAATTAGATTCAAGAATGTCTCTTCATGAAATGATTCATAACGCAATGGAAAGATTGATCTTAATACCTAATAACTCCGTTCTAATTCCAGAACCATTATATTTAGATGAGCCATCTGACAATATTGAAGATTTCACAAAATCAATTGAACAACTAAACATTATAAATAGTTGTGGAGTGAACTTTCATAGGTATATGTCGCCTTGGAATTTTAGATGTCCAGTTGAACTAAGAAAGAGGAAATCTATGAAAGGAAACTCTAAATTTGCTGTAACATTCTTTAAGCATGTTTACTGTTTATCCTCTTTTGATGCTATGCTACAGTTTTGTAAAAATCCACGCCCTTATTTAAAGTTAGAATATTTAGAACCTACTTGTAGAATAATAATAGTAGGAACAAAATCTTCAGGGAAAAGTATGATTGCTCAATGTCTTTCTTGGATATTCAACACGCCTATTATATGCTATAAAACTTTTTTAGAACAGCAAAAGTCCAAAAAGTACTTTGATTTTTCTAAATCTATCCTGTCAAGTATCAGTGCTAAAATAGAAGACGACCGTTTTTCTCAGTGGCAGAGCGCCGAAATAGAGAGATATCAAAAGATTGAAATGTGGTATGATACTACCGCAAGTATTATACAAGAATATTTATGGCTACAATCAAATATGGAACCAAGACAAAATGAAACGATTTCCCTCAATCAAACGGAGCAAAGAACAAACGCAATAGTTTCTGTAGAAAACACTGACCTAACAGATAATATAAAACGACTTGAATATCTTCAGTCGGAACTTTCTTTTCTGCCATTCGAAAATGATGAAGAGCAATTAAAACGTGCTCTTGATGACAAGCAATTTTTATGTCAATTCATTCCTGCAGAACTAAAAATATCTGCAAGAAAACCCGAGATGCCTATGATCGGCGATGAAGACGTTTCTAAAGCTGTGGCGGAATTCATTGTAGCAAATGATCTCCAAAATGAAGTTGAACCAACAAATGAGGAATTAATAAATGAAATTATTAACATCACATCTAGTGATAACGAAAGTAACAAAACTGATTTAGATTCTAAATATAGTAAATATATCATTGATGGGTTCACCACAAATCCTGAATGTTGGGAATATCTCATTACGGCGAAAAGTTTGCCAGATTATACTATAGCACTTGTGGAAAATAAAGAAATAGACTCCCAATTAGCAAAGTACTATTTTAACATCGAAAATAGTGTTAAAAACTACGTCGAAAAATTTTCACTAGCTCAAGATCCACTAATAACTCAAAAAATGATTTCCGGTGAAGTACCAGATAAAATAAACAGTTCTCTAAAAATTGCTCACGATAATGAACAAGTTGTACGAGATCAGACCGAAGATGAGACTACACAAATGAATACAATTTTTGATGAAACTGCTTTTACAACTGCCCTTAGTGAATCTATTGATAAATTTAAAGAAGAATGGGATGTTCTGAAGACGCGACTTGATGAATTTTACAAAGGTTATATTGAAGTGGAATTGGAAACGAAATCTGACGTGGAAATAATCGATGAAGTTTTATTAAAATTACGTAAATGTTACTTTGCACCATGCGAGCCTTGTTATGAAAATGAAAGTCGTGATAGTATTTCAGATACTTTCACTAAAGATGTGATGACAAATAAACCAAGCTTTGTCTCTGAAACTAACATTTATTGTCCTGTAACATACTACGATTATGGTGTGTTATGGGAGGGTAAGAAAGACTTTTCATTGCGGCTTAATAATCAAATTTACAGATTTTGTAACGAGGAATTTTCAGTTTTGTTTCAAAAAGATCCTGGTCGATATCAAGTCTTAAAGACTCCATATAAAAAATTGCCTCCTTTGAGAATTTGTGTAATAGGTTGTATCGGCTTGGGTAAAACAACATTGTCTAAATATATAGCAAAAGAATTAGGCCTAATACACATTGATTTCGTTGAAATACTAAATGAAGAATTGGTCCCTAAACATTTTAAAAAAGTTGGACGTAAATATGAAAATAGTTTTACTGATAACCCTATTGATGATGAAGGAGCTGTCGAATACCAGATGGACGAAGAGAATATGAATGCATCCCTAGTAAATGTTTTGTACAATGAAACTGAAATAAGGTCTATAATATATAACTATTTGGAGAAAGGTATATCTATACCTTCGACTCTAATGCATAAAATTCTCAAAAAGTTGTGGTTTGAGGAACCTTTCGTAAAAACAGGTTTCGTATTAGACGGGTATCCAAAGACTCCTAATGACGTTAATGACATGCTTACATTTTTATGCATTCCCGATTTAATTATTGAATTGGAAGGAACTTCAGTAAACACGATTGATCGTTTATCGCCAGAGATGATTAACACTTGGAAATTGCAGCTGAACGAAGCCAAAGCTAATGCTAGAGTAAAATTAGAAATTGAAAAAAAAGAATGGATGAACTTTATTACGAAGAATGTTGTAGGTAAATTAATACTTGAAGATTTACTAGATAATGTACCTCATGTAGATAATGTACTGGCTCCAACTATGAAACCTCTGAGTACATCTTCGATGGAGAGTGTTATAATAGACGCTCACCCATCTGGATCGTTTAACGTTGATGCCAATTTATTTACTATTTATAACCAGATCGTTGAAGAGTTTCCGGAACCTGAAGATCAAAATATTTGGGAAAAATCTGACGAAGCTCGCGAAAAAATAGATTCCAGGCTAGAAAGTGTATTTGAAACTGAATCTGAAAATATTCAAGCTCTTAAAGATTTATTATCGGAACAAAATATAAAACTAGAGACTGTTGATGCTACAAAGTCTTTTGAAAAAGTGATGCGTACAGCATTGTCTAAACTAAACGATTTAAGAAACAGAAACATTTCGTTTCTTGAAGAGACGTATGTAATCGATTTAGACGTAGCAGAAATATTGTTGGGGGCAGGATTTTATTTTCAAAGTAAATTTCATCGCATGTGTCCAGTGCAAATATACGACAGTCCGCATATTATATTAAATCCTTACAAATTAAGCAAGAAAAAAGGAACACTATATCCTGTAATTCACCGATCATATATCTATTTTGTTAGTAGCATAGATAACCTAATAAAATTTCGAAATAATCCTATCAAATACGCTGATAGTAACACGATCATTGAATATCGACATCATCCTTTAAAAATTGCTATTATTGGCCCTCCAAAGTCGGGTAAGAGTATGTTGGCAGAGAAAATATCCAAACAATATGGGTTACTTTGTATCTCGAGAGGAAAAGCAATACGTGATGTATTAAATAATCTTTCCTGGACCAAATTGGCCTCGAAGATGAATTCGGTTCTGATAAGAGGCGAAATATTAAATTATGACTTACTAATGAGTGCTGTACAAACGGAGGCCATTGATCATAGAATTGTTACACATGGCTTTGTTTTAGATGGTTTTCCTGAAACACCCTCGGAAGGCATTGAACTTTGCAAAAATAAATTGTATCCTAACATTATATTTGATATTTCTAGTACGAAAGCCAAAATAATTGAAAACTGTCGTTGTGAAAACTATTTAGATATCATCAAACAGAAACCACATTTCCCAGAAATTCTCATTGAAAAGCGTTACTCTATTTGGAAAGAAAATTGTAACAAAATTAGAGATTGGATTGACGAAGATTATCAGAATATTTATGTACTTGATGGAAACAGTACTCGATGGAAATGTTTACAAGATGCACTTAAAATAATTGCCAATTTTAGTAAGGAAATGCATTATGTTTTATCTGCAGGAAAATTGTCAGCTGTACCAGTTGAAGTTTTATGCATATCCAATGATGATTTTAGACAAAATATGTCTAATTATAAAAACATTTGCCCTATATGTTTCCATCAGAACATTTTCCGAAATGGCGGACCCTCTGTTAATAAAAAGGGTGTAGTTTTGTACGATAATACTTTTTTTTGGGTTTGCTCTGAACATATGAAAATGGCAATTGACCGCCCCCATATTTATCTTTGTAACAAAAAAGTTTATATTCCTGAGATTCCAGCTGTCATAAAAACTATTGATCCTATTTTAATATATGAAAATGGTATTTGCATAGTAACATATGCAGAAAACTTACCAGCCCAAAAGGTCAAGAAAGGTAGTGAAAAGATAGCCGTGAATTTTGAAGGAAAAATATATTTATTTTGCAGCGAAATATGCTTAGAAAAGTTTTTGAGAAAACCTTACCTTTACAAAGACGTTGTCGTATTCAAGGAAACTAAATTGTTTCCCAAGATAACAATAGATAAATTACCTGATCTAGAGATATCTAACCATGCTCTTTCGGTTTCAGCACGTAGGGTACCTGTACCTGATGAAAGGTATGACTACCTATGCGAATATCATAAACCAGCAAGCAAAGTGCCAGCTTTCCTCAACGTGGTAGACATAGCCGGTCTCGTGCGCGGCGCTGCTGAAGGCCAAGGATTGGGAAACGCCTTTCTGTCCCACATCAAAGCTTGTGATGCTATTTTTAACTTGTGTCGTGCATTCGATGATGAAGACGTCATCCATGTTGACGGTGACGTAAATCCGGTAAGAGACTTGGAGACAATTGCGGAAGAGCTACGCTTGAAGGACGAGGAGCAGCTTCTGCAGCATATCGAGAAACTGGACCGAGTGGTCAACAGAGGCGGCGAAAAGAAACTTAAACCTGAATACGATTCCCTGGCTAAAGTCAAGACTATTCTAGTTGATGAGAAGAAACACATTAGATTCGGCGATTGGAGCGCAGCTGATATTGAAGTTTTAAATAAATACCTGTTCCTAACTTCAAAACCCGCTCTATACCTCGTTAATTTATCTGAAAAGGACTACATTAGAAAAAAGAACAAATGGTTACCAAAGCTCAAAGAGTGGATCGACAAAAACGACCCCGGCTCTCCTCTGATTCCATTCTCTGGAGTGTTGGAATCTAAATTGCTGGACATGGATCCGACTGAACGTGTCTCTTACTTGAAGGAACACGGCATAACGAGTGCATTGGACAAGATCATTGTTCAAGGATATAAGGCTCTGCAATTGGAGTATTTCTTCACAGCTGGAGCAGATGAAGTCAAAGCCTGGACAATTCAGAAAGGCACAAAGGCTCCTCAAGCCGCAGGACGTATCCACACCGACTTCGAGAAGGGTTTCATCATGGCCGAAGTCATGCATTTCAAGGACTTCAAGGAAGAGGGTACCGAAGCTGCGTGTAAAGCCGCCGGAAAATACAGGCAACAAGGTCGTAATTACGTCGTCGAGGATGGCGACATCATCTTCTTCAAGTTCAACGCGGGCGCCGGTTTGAAGGACGCCAAAAAGAAATGA
Protein
MPPKKVEGPEKKPLIGRVGTNLKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNENNKYDVLDSNGVKDIKIEKNATYRGPIDIIYKLARPIEFKHGVPLGATTVGINNTDAPLPRETKYYTAWNDLDAQEIYLNTKPTCYLIVGKPGSGAYSLGEALAKRLKCIHLSPLTILRDELEQQGPTGICLDFNMRHNMKCIFNILLLILKKKLESPVVQHRGYILTGFPLISNKTDSRLVITSQHGEEALNTSSEICNFLVNNIKRKEKKGSIVQKTNTSSFIEMEEEELTETLEEEHEHEEAIEEQEELPKEFPKSMLEFCSNIVFNQKTHICDNESTFLKQFEEIFNLDLSPDVIINITSPDCDLITKKSSKYFNYLNSQIVMEPFNNNPVSESRWPSKYTVKDFINPFDSHIFNPKYMCRQPYNFKLHSTQQMCNYKNTIKSAIDKKLEEYGYNAIKLDSRMSLHEMIHNAMERLILIPNNSVLIPEPLYLDEPSDNIEDFTKSIEQLNIINSCGVNFHRYMSPWNFRCPVELRKRKSMKGNSKFAVTFFKHVYCLSSFDAMLQFCKNPRPYLKLEYLEPTCRIIIVGTKSSGKSMIAQCLSWIFNTPIICYKTFLEQQKSKKYFDFSKSILSSISAKIEDDRFSQWQSAEIERYQKIEMWYDTTASIIQEYLWLQSNMEPRQNETISLNQTEQRTNAIVSVENTDLTDNIKRLEYLQSELSFLPFENDEEQLKRALDDKQFLCQFIPAELKISARKPEMPMIGDEDVSKAVAEFIVANDLQNEVEPTNEELINEIINITSSDNESNKTDLDSKYSKYIIDGFTTNPECWEYLITAKSLPDYTIALVENKEIDSQLAKYYFNIENSVKNYVEKFSLAQDPLITQKMISGEVPDKINSSLKIAHDNEQVVRDQTEDETTQMNTIFDETAFTTALSESIDKFKEEWDVLKTRLDEFYKGYIEVELETKSDVEIIDEVLLKLRKCYFAPCEPCYENESRDSISDTFTKDVMTNKPSFVSETNIYCPVTYYDYGVLWEGKKDFSLRLNNQIYRFCNEEFSVLFQKDPGRYQVLKTPYKKLPPLRICVIGCIGLGKTTLSKYIAKELGLIHIDFVEILNEELVPKHFKKVGRKYENSFTDNPIDDEGAVEYQMDEENMNASLVNVLYNETEIRSIIYNYLEKGISIPSTLMHKILKKLWFEEPFVKTGFVLDGYPKTPNDVNDMLTFLCIPDLIIELEGTSVNTIDRLSPEMINTWKLQLNEAKANARVKLEIEKKEWMNFITKNVVGKLILEDLLDNVPHVDNVLAPTMKPLSTSSMESVIIDAHPSGSFNVDANLFTIYNQIVEEFPEPEDQNIWEKSDEAREKIDSRLESVFETESENIQALKDLLSEQNIKLETVDATKSFEKVMRTALSKLNDLRNRNISFLEETYVIDLDVAEILLGAGFYFQSKFHRMCPVQIYDSPHIILNPYKLSKKKGTLYPVIHRSYIYFVSSIDNLIKFRNNPIKYADSNTIIEYRHHPLKIAIIGPPKSGKSMLAEKISKQYGLLCISRGKAIRDVLNNLSWTKLASKMNSVLIRGEILNYDLLMSAVQTEAIDHRIVTHGFVLDGFPETPSEGIELCKNKLYPNIIFDISSTKAKIIENCRCENYLDIIKQKPHFPEILIEKRYSIWKENCNKIRDWIDEDYQNIYVLDGNSTRWKCLQDALKIIANFSKEMHYVLSAGKLSAVPVEVLCISNDDFRQNMSNYKNICPICFHQNIFRNGGPSVNKKGVVLYDNTFFWVCSEHMKMAIDRPHIYLCNKKVYIPEIPAVIKTIDPILIYENGICIVTYAENLPAQKVKKGSEKIAVNFEGKIYLFCSEICLEKFLRKPYLYKDVVVFKETKLFPKITIDKLPDLEISNHALSVSARRVPVPDERYDYLCEYHKPASKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKKHIRFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDKNDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGADEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGRNYVVEDGDIIFFKFNAGAGLKDAKKK

Summary

Uniprot
A0A0L7KYS6   A0A2A4JT26   A0A194QS86  
Pubmed
26227816    26354079   
EMBL
JTDY01004421    KOB68179.1    NWSH01000730    PCG74542.1    KQ461175    KPJ07845.1    + More
Proteomes
UP000037510    UP000218220    UP000053240   
Pfam
PF03669   UPF0139        + More
PF06071   YchF-GTPase_C
PF01926   MMR_HSR1
Interpro
IPR012675   Beta-grasp_dom_sf        + More
IPR012676   TGS-like       
IPR005351   UPF0139       
IPR027417   P-loop_NTPase       
IPR023192   TGS-like_dom_sf       
IPR013029   YchF_C       
IPR004396   ATPase_YchF/OLA1       
IPR006073   GTP_binding_domain       
IPR031167   G_OBG       
IPR041706   YchF_N       
SUPFAM
SSF52540   SSF52540        + More
SSF81271   SSF81271       
Gene 3D
1.10.150.300     3.10.20.30    
CDD
cd01900  YchF
 cd04867  TGS_YchF_C
ProteinModelPortal
A0A0L7KYS6   A0A2A4JT26   A0A194QS86  
PDB
2OHF     E-value=9.62674e-138,     Score=1263

Ontologies

KEGG
732871    K19788 obg-like ATPase 1 | (RefSeq) GTP binding protein
GO
GO:0005525   GO:0003676   GO:0003887   GO:0008408   GO:0003677   GO:0005216   GO:0006811   GO:0006541   GO:0016812   GO:0016597  

Topology

Length:
2244
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0647600000000001
Exp number, first 60 AAs:
0.05935
Total prob of N-in:
0.00299
outside
1  -  2244
 
 

Population Genetic Test Statistics

Pi
237.305435
Theta
164.217262
Tajima's D
0.772819
CLR
1.429227
CSRT
0.592720363981801
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 RFMDGKKACEQMIEALELDHNLYRVGQSKIFFRAGVLAHLEEERDYKITDLIVNFQAFCRGYLARRNYQKRLQQLNAIRIIQRNCAAYLKLRNWQWWRLYIKVSENLFIPIYLYIFMDT 100.00 2e-26
25044914 AFCNVVDPNR 100.00 4e-06
28556443 LKPEYDSLAK 100.00 4e-06
28556443 FGDWSAADIEVLNK 100.00 4e-05
28556443 FGDWSAADIEVLNK 100.00 4e-05
31250652 NALICTVLASAGQQR 100.00 0.003
28556443 DLETIAEELR 100.00 0.003
28556443 DLETIAEELR 100.00 0.003
28556443 LKDEEQLLQHIEK 100.00 0.004
28556443 VGIVGVPNVGK 100.00 0.004
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