SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05805
Annotation
hypothetical_protein_KGM_00009_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 2.045 PlasmaMembrane   Reliability : 2.741
 

Sequence

CDS
ATGCTGGGTAGGGCACAGATTAACGGTTTTTTCTTCAAAATGACCAAAAGTGCAACTATTTTCGTTTTTATAATCATCACTTCATTTCTAGAAGTGCTAAGCCTCGAGTGTTATGTTTGTGAAAATCAAGAAGATAATAATGGAAAGTGTGTGAACACCATAAAGCCCTGTGAACACAACCAAGATGTTTGTCTGACCGAAATCAGATGGGGTAGTACTCCATATTGGTCCCAAGGGGCAAAGAAACAATATTACATATCTAAAAGCTGTTCTAACAAAACTGAATGCCCTAAAACTAGACAACAAAACATGCCTTTATGCACGTACATTTGGTATCAAGACTGGAAGTGCTCAGATTGCTGTCTCGGCGACCGATGCAATTATTACATTATAAGTGGGAGCAGACAAAATATGCCATTTAACAGAATCATATTGGGATTGACATCTGTTTACCTGCTTTCTTTAACTAATTTTTACTAA
Protein
MLGRAQINGFFFKMTKSATIFVFIIITSFLEVLSLECYVCENQEDNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCSNKTECPKTRQQNMPLCTYIWYQDWKCSDCCLGDRCNYYIISGSRQNMPFNRIILGLTSVYLLSLTNFY

Summary

EMBL
GAIX01014230    JAA78330.1    KZ149900    PZC78554.1    NWSH01006085    PCG63678.1    + More
AGBW02012322    OWR45215.1    ODYU01003034    SOQ41302.1    KQ971370    KYB25614.1    GEZM01033219    JAV84343.1    GECZ01002158    JAS67611.1    ADTU01007040    PYGN01000169    PSN52230.1    GEDC01000477    JAS36821.1    GEBQ01024556    JAT15421.1    GECU01009410    JAS98296.1    AJWK01023153    UFQS01003306    UFQT01003306    SSX15467.1    SSX34835.1    GDHC01021319    GDHC01012557    GDHC01009853    JAP97309.1    JAQ06072.1    JAQ08776.1    PSN52231.1    ADMH02000949    ETN64591.1    CVRI01000020    CRK91104.1    AJVK01010475    GGFM01006115    MBW26866.1    GGFJ01010370    MBW59511.1    GFDF01005910    JAV08174.1    LJIJ01000210    ODN00390.1    LJIG01009267    KRT83421.1    GBHO01039635    GBHO01039633    GBHO01039628    GBHO01025455    GBHO01025423    GBHO01025322    GBHO01020092    GBHO01010058    GBRD01016449    GBRD01010818    GBRD01010817    JAG03969.1    JAG03971.1    JAG03976.1    JAG18149.1    JAG18181.1    JAG18282.1    JAG23512.1    JAG33546.1    JAG49377.1    ABLF02034685    GAPW01005593    JAC08005.1    APCN01004096    CH477244    EAT46264.1    GBXI01016757    GBXI01001147    JAC97534.1    JAD13145.1    GFDL01010261    JAV24784.1    AAAB01008846    EAU77360.3    AXCN02001385    GFDL01010252    JAV24793.1    JXUM01031464    JXUM01031465    JXUM01031466    JXUM01031467    JXUM01031468    KQ560923    KXJ80327.1    GGFK01010420    MBW43741.1    JXUM01071398    JXUM01071399    KQ562662    KXJ75374.1    KK854682    PTY17859.1    JRES01001034    KNC26050.1    GGMS01002388    MBY71591.1    ATLV01023287    KE525342    KFB48816.1    CCAG010011415    DS232174    EDS36766.1    GDHF01020121    JAI32193.1    CAQQ02168967    GAKP01006929    JAC52023.1    GDHF01025447    GDHF01018142    GDHF01008744    JAI26867.1    JAI34172.1    JAI43570.1    AXCM01006172    LNIX01000001    OXA63690.1    GAMC01002724    JAC03832.1    GFTR01002282    JAW14144.1    QCYY01001256    ROT79331.1    GL732530    EFX86104.1    CH954177    EDV57251.1    GDIQ01227671    GDIQ01088869    JAN05868.1    LRGB01000512    KZS18558.1    GDIQ01233718    JAK18007.1    JXLN01005560    KPM03633.1    GDIQ01134504    JAL17222.1    GDIQ01266739    JAJ84985.1    GDIP01061715    GDIQ01057132    JAM42000.1    JAN37605.1    CH902620    EDV30772.1    GDIP01246615    JAI76786.1   
Pfam
PF00021   UPAR_LY6
Interpro
IPR016054   LY6_UPA_recep-like       

Ontologies

Topology

SignalP
Position:   1 - 34,         Likelihood:  0.699695
 
 
Length:
159
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
28.98623
Exp number, first 60 AAs:
19.97574
Total prob of N-in:
0.38056
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  159
 
 

Population Genetic Test Statistics

Pi
163.903815
Theta
173.533825
Tajima's D
-0.396033
CLR
0.018253
CSRT
0.267736613169342
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号