SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05802
Annotation
PREDICTED:_BMP-binding_endothelial_regulator_protein-like_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 2.793
 

Sequence

CDS
ATGCGGGCACCGTGCCGCACCGCATACGCCGCATGTCTCCTACTGCTCGCCGGAATCATCTCCAACAGCCCTGTAGACGCTTCTTCCGCTGTTATTAAAGGGGTCCGCATTCCGTGTTCGAACGAGGGCGAGCCCGTCCGGTTGCAAGACACGAGACTAGAACAAGATTGGAGCAGTTGTTTCCGCTGCATTTGTAAGTAA
Protein
MRAPCRTAYAACLLLLAGIISNSPVDASSAVIKGVRIPCSNEGEPVRLQDTRLEQDWSSCFRCICK

Summary

Pfam
PF08742   C8        + More
PF00093   VWC
PF00094   VWD
Interpro
IPR001007   VWF_dom        + More
IPR001846   VWF_type-D       
IPR014853   Unchr_dom_Cys-rich       

Ontologies

Topology

SignalP
Position:   1 - 27,         Likelihood:  0.998300
 
 
Length:
66
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.78586
Exp number, first 60 AAs:
3.78586
Total prob of N-in:
0.77573
inside
1  -  66
 
 

Population Genetic Test Statistics

Pi
188.633714
Theta
167.344357
Tajima's D
0.208491
CLR
0.291086
CSRT
0.428378581070946
Interpretation
Uncertain
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