SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05796
Pre Gene Modal
BGIBMGA006915
Annotation
cytochrome_P450_CYP18B3_[Spodoptera_littoralis]
Full name
Cytochrome P450 18a1      
Alternative Name
CYPXVIIIA1
Location in the cell
Cytoplasmic   Reliability : 2.716
 

Sequence

CDS
ATGTACCTACCACCAGGACCATGGGGTGTACCGTTTCTTGGTTATCTTCCGTTCATGAAGAGCTCACCCCACGCCATGTATTCTAGAATGGCCGATAAATACGGTGAAATTTCTTCTATAAAACTTGGAAACCATTTAGTCGTCTGTCTCAATTCGCCGAAACTTGTGAAGGAACTCTTCAGTCGATCGGATTCTATCGCGAGACCAAGAACTCCGCTGAACGAAATCATGGAAGGACGAGGTATAGTACTGAGTGAAGGTATACTTTGGCAGAAACAGCGTCAATTTCTACATGAAAAATTCAGGGCTCTTGGAGTCAAGGTTTGGCCGAAACAGCGATTCGAGAAATTTATTATTATGGAAATCGAAGAATTTATAACTGACCTAATTAAATTGAATGGAGCTCCTGTTGATCCAACGCTTTTGCTCGGAAGACACGTACACAATATAATATGCCAATTGATGATGAGTTTCCGATTTGAAGAGGACGATCAAGAATTCGGTATATTTAATGAAAAAATCAGTCGTGGGATGAAGCTGTACGGATCGATACACGCTAGCGAATACGTGCGGCAGTACTTGAAACTGCCCGGAAAGAAAACAATTTTAGACGAAATGAAACGTAGCTTGGCCGACATCAGCGAATTTCATGCAAACAAGATCAGAGAACGTATTGATTATCGAGCAACCCATCCGTATGATGAACCTGCCGACCTTTTGGATTATTACTTGGACAATATTGAAGCTAGGAAATCAAGAAAACGTTTCCCTGATATATTCCCGGGAGTCGATCCAGAGAAACAAGTAGTACAAGTGATGAACGATCTCTTCTCCGCCGGAATGGAGACGTCGCGCACGACTCTCTCCTGGACCTTACTGATGATGATCCACGAGCCTGACGTGGCTGCGAAGGTCCGGGCCCAGCTCACAGAAACGGTCCATCCAGGAGAGCTCGTAACCCTCGATCATCGCCCCGAGCTGCCGTACCTCGAGGCTGTGCTGTTCGAGACATTACGATGCGTTTCACTCGTACCCTTAGGAACCACACATGTCAATACAACCGAATGGAAAGTGGACAAGTACGTCATCCCGAAAGGAGCACACATTATTCCCTTAATCGGCAAGATGAATAACGACCCCAAAGTATACCCGGAACCGGATAAATTCAAACCGGAACGTTTCTTGCGCGACGGCCAGTTTCACATCCCGGATAGCTACATGGCTTTCGGAGTTGGACAACGCTTGTGTCTGGGAATCCAATTGGCCAGGATGCAGCTATTTCTCTTCTTCGCCAACATTATGAATAGATTCGAGTTTTCGCTGCCCGAGGGCGCTGAGATGCCGCCTTTAGAGGGCTTCATGGCCGCAACACACACTCCATTACCTTATTCTTTGTGTTTCCACAAAATCGATAACTAA
Protein
MYLPPGPWGVPFLGYLPFMKSSPHAMYSRMADKYGEISSIKLGNHLVVCLNSPKLVKELFSRSDSIARPRTPLNEIMEGRGIVLSEGILWQKQRQFLHEKFRALGVKVWPKQRFEKFIIMEIEEFITDLIKLNGAPVDPTLLLGRHVHNIICQLMMSFRFEEDDQEFGIFNEKISRGMKLYGSIHASEYVRQYLKLPGKKTILDEMKRSLADISEFHANKIRERIDYRATHPYDEPADLLDYYLDNIEARKSRKRFPDIFPGVDPEKQVVQVMNDLFSAGMETSRTTLSWTLLMMIHEPDVAAKVRAQLTETVHPGELVTLDHRPELPYLEAVLFETLRCVSLVPLGTTHVNTTEWKVDKYVIPKGAHIIPLIGKMNNDPKVYPEPDKFKPERFLRDGQFHIPDSYMAFGVGQRLCLGIQLARMQLFLFFANIMNRFEFSLPEGAEMPPLEGFMAATHTPLPYSLCFHKIDN

Summary

Description
Probably involved in steroid hormones biosynthesis.
Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
Keywords
Complete proteome   Developmental protein   Endoplasmic reticulum   Heme   Iron   Membrane   Metal-binding   Microsome   Monooxygenase   Oxidoreductase   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Cytochrome P450 18a1
EC Number
1.14.-.-
EMBL
BABH01024452    KZ149900    PZC78549.1    KX443452    ASO98027.1    JQ979045    + More
AGU36299.1    NWSH01002327    PCG68522.1    KY212059    ARA91623.1    KQ459302    KPJ01782.1    KQ461175    KPJ07832.1    MH138180    AXP17121.1    KX609518    ARN17925.1    KK107260    QOIP01000001    EZA54128.1    RLU27313.1    KQ434890    KZC10452.1    KQ774645    OAD52306.1    GFDF01000635    JAV13449.1    KPJ07831.1    GFDF01000678    JAV13406.1    AGBW02008863    OWR52347.1    KR058859    ALG65076.1    KY212058    ARA91622.1    KM217007    AIW79970.1    GL446201    EFN88284.1    NEVH01016967    PNF24798.1    KK854379    PTY15275.1    KZ288312    PBC28377.1    GBBI01002060    JAC16652.1    GFTR01006918    JAW09508.1    U44753    AM411848    AM411849    AM411850    AM411851    AM411852    AM411853    AM411854    AM411855    AM411856    AM411857    AM411858    AM411859    AM411860    AE014298    S66112    OUUW01000003    SPP77899.1    CH933814    EDW05714.1    CH916370    EDV99814.1    UFQT01000959    SSX28189.1    CH480823    EDW56057.1    CH940651    EDW65982.1    CH964239    EDW82806.1    CH984138    EDX16681.1    JRES01000348    KNC32028.1    CCAG010001311    CM000162    EDX02757.1    CH954180    EDV46625.1    CH379065    EAL31437.1    CH902625    EDV35052.1    GBXI01016278    JAC98013.1    KC701467    AGI92302.1    GAMC01019403    JAB87152.1    DS231824    EDS27409.1    KK852530    KDR21921.1    JXJN01008607    CH477318    EAT43716.1    GDHF01021694    JAI30620.1    GBHO01005737    GDHC01007258    JAG37867.1    JAQ11371.1    GBYB01000511    JAG70278.1    GANO01001300    JAB58571.1    KQ435936    KOX68309.1    LJIJ01000032    ODN04952.1    ADTU01012323    KQ976438    KYM86820.1    AXCN02002216    ADMH02002005    ETN60006.1    KPJ01783.1    DS235327    EEB14713.1    CP012528    ALC49375.1    AXCM01000572    GL434776    EFN74585.1    KP001118    AJN91163.1    ATLV01018418    KE525233    KFB43110.1    KQ978496    KYM93624.1    KQ981744    KYN36452.1    GL888828    EGI57772.1    ODYU01005660    SOQ46746.1    JTDY01001692    KOB73146.1    RSAL01000003    RVE54859.1    BABH01024447    EF421988    AK343215    AK343216    AK343217    ABO07438.1    BAM73898.1    BAM73899.1    BAM73900.1    KP058448    AKP80583.1    KQ414646    KOC66607.1    PCG68521.1    PZC78548.1    AM086639    CAJ31114.1    EU334832    ABY53102.1    KX443451    ASO98026.1    KF701122    AHW57292.1    KF044259    AGT57831.1    KP859375    AKZ17685.1    GEZM01051744    JAV74723.1    GL732532    EFX85356.1   
Pfam
PF00067   p450        + More
PF00069   Pkinase
Interpro
IPR002401   Cyt_P450_E_grp-I        + More
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR036396   Cyt_P450_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR000719   Prot_kinase_dom       
IPR016024   ARM-type_fold       
IPR008069   Cyt_P450_E_grp-I_CYP2D-like       
SUPFAM
SSF48264   SSF48264        + More
SSF56112   SSF56112       
SSF48371   SSF48371       
Gene 3D
PDB
6CSD     E-value=3.26557e-48,     Score=485

Ontologies

Topology

Subcellular location
Endoplasmic reticulum membrane  
Microsome membrane  
Length:
472
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16253
Exp number, first 60 AAs:
0.0305
Total prob of N-in:
0.00170
outside
1  -  472
 
 

Population Genetic Test Statistics

Pi
196.465249
Theta
181.320179
Tajima's D
-1.208699
CLR
1517.596663
CSRT
0.0998450077496125
Interpretation
Uncertain
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