SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05795
Pre Gene Modal
BGIBMGA006916
Annotation
cytochrome_P450_18a1_[Bombyx_mori]
Full name
Cytochrome P450 18a1      
Alternative Name
CYPXVIIIA1
Location in the cell
Cytoplasmic   Reliability : 1.446 Mitochondrial   Reliability : 1.266
 

Sequence

CDS
ATGCTGATCATTGTAACCTGCACGGCGTTGTTGTTGACTCAATTCCTGAAGCTAGTACGTGACATTCGCAAGTTGCCCCCGGGACCGTGGGGACCACCCGTCGTCGGCTACCTACCTTTTCTCGGAGTCCGGCACAAGACGTTCCTTCAATTGGCCAGAAACTATGGAGCTCTCTTCTCTGCGCGACTCGGAAACCAATTGACCATCGTTATGAGTGACTACAAAATTATCAGAGAAGCCTTCCGACGCGAAGAATTCACCGGTCGTCCCAGCACTCCCTTAATGCATACTTTAGATGGTCTTGGCATCATCAATAGCGAGGGCCGCCTCTGGAAAAATCAACGACGGTTCTTGCACGAAAAACTACGGGAGTTCGGCATGACTTACATGGGAAACGGCAAAAAACTAATGGAGGATAGAATCAAGAATGAAATCCACGAGCTGATTGTAAGCCTGCATCGAGCGCAAGGCGCACCTATTGACGTAAATCCTCTCCTTGCGCTGTGCGTGTCCAACGTTATCTGCGGTATCACGATGTCGGTCCGTTTTAGTAACGGCGATGTACGCTTCGAGAGACTCAATCATCTTATCGAAGAAGGAATGAGACTTTTCGGAGAAGTTCACTACGGAGAATACATTCCTCTGTATAATTATCTACCTGGAAAAGCTCTAGCTCAAGAAAAGGTCGCAAAAAATCGCGATGAAATGTTCGCGTTCTATCAAACATTGATAGACGAGCACCGCGAAACTCTGGACATCAATAATGCCAGAGACCTTATCGATGTCTACTTAATTGAAATCGAGAAGGCGAAGAGCGAGGGCAGGGCCGGCGAACTCTTCGAAGGAAGAGATCATGAATTACAATTAAAACAAATACTTGGAGATCTTTTCTCTGCTGGTATGGAAACCATAAAGTCGTCGCTTCTGTGGATGATAGTATTCATGTTGCGAAACCCAGACGTGAAAAGGCGTGTACAAGAAGAACTCGATGCGGTCATTGGCCGAGAACGTCTCCCTTCTATTGACGACATATCTAGTCTTCCATACACCGAAACTACAATTTTGGAAACGCTAAGATTATCAAGCATTGTTCCTTTGGCAACCACACATTCTCCGACTAGGGATGTGCAAATCAACGGCTATAAGATTCCGGCGGGTTCTCAGGTTATACCACTTATTAACTGCGTGCACATGGATCCGAATCTCTGGGATGAACCAAACAAATTCAATCCTAGTAGATTCATCGACGCGACCGGCAAGATAAGACGTCCGGAATATTTCATGCCATTCGGGGTCGGCCGAAGAATGTGTTTGGGCGACGTATTGGCCCGCAAAGAGATGTTCATGTTCTTTTCGTGTATGATGCACCAATTCGACTTGGAAATGGCTGAAGGTGACGCATTACCTTCGCTGGAGGGCATAGTAGGTGCTACAATTGCACCGAAAGCTTTTCGTGTGAAATTTTTGGCTCGTTCACCAGTACCCTTAGTACCGACTACGCTCTCTGCAGATAGCTCTCATCTTCGTCATGTCGGCTCACATTAA
Protein
MLIIVTCTALLLTQFLKLVRDIRKLPPGPWGPPVVGYLPFLGVRHKTFLQLARNYGALFSARLGNQLTIVMSDYKIIREAFRREEFTGRPSTPLMHTLDGLGIINSEGRLWKNQRRFLHEKLREFGMTYMGNGKKLMEDRIKNEIHELIVSLHRAQGAPIDVNPLLALCVSNVICGITMSVRFSNGDVRFERLNHLIEEGMRLFGEVHYGEYIPLYNYLPGKALAQEKVAKNRDEMFAFYQTLIDEHRETLDINNARDLIDVYLIEIEKAKSEGRAGELFEGRDHELQLKQILGDLFSAGMETIKSSLLWMIVFMLRNPDVKRRVQEELDAVIGRERLPSIDDISSLPYTETTILETLRLSSIVPLATTHSPTRDVQINGYKIPAGSQVIPLINCVHMDPNLWDEPNKFNPSRFIDATGKIRRPEYFMPFGVGRRMCLGDVLARKEMFMFFSCMMHQFDLEMAEGDALPSLEGIVGATIAPKAFRVKFLARSPVPLVPTTLSADSSHLRHVGSH

Summary

Description
Probably involved in steroid hormones biosynthesis.
Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
Keywords
Complete proteome   Developmental protein   Endoplasmic reticulum   Heme   Iron   Membrane   Metal-binding   Microsome   Monooxygenase   Oxidoreductase   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Cytochrome P450 18a1
EC Number
1.14.-.-
EMBL
BABH01024447    EF421988    AK343215    AK343216    AK343217    ABO07438.1    + More
BAM73898.1    BAM73899.1    BAM73900.1    EU334832    ABY53102.1    KX443451    ASO98026.1    KP058448    AKP80583.1    ODYU01005660    SOQ46746.1    KZ149900    PZC78548.1    NWSH01002327    PCG68521.1    JTDY01001692    KOB73146.1    AM086639    CAJ31114.1    AGBW02008863    OWR52347.1    KY212058    ARA91622.1    KP001118    AJN91163.1    KQ459302    KPJ01783.1    RSAL01000003    RVE54859.1    KF701122    AHW57292.1    KQ461175    KPJ07831.1    JRES01000348    KNC32028.1    GAMC01019403    JAB87152.1    GDHF01021694    JAI30620.1    GBXI01016278    JAC98013.1    CH933814    EDW05714.1    CH964239    EDW82806.1    CH379065    EAL31437.1    CCAG010001311    CH480823    EDW56057.1    CH984138    EDX16681.1    CH902625    EDV35052.1    GFDF01000678    JAV13406.1    CH954180    EDV46625.1    GFDF01000635    JAV13449.1    U44753    AM411848    AM411849    AM411850    AM411851    AM411852    AM411853    AM411854    AM411855    AM411856    AM411857    AM411858    AM411859    AM411860    AE014298    S66112    JXJN01008607    CH940651    EDW65982.1    CM000162    EDX02757.1    CH916370    EDV99814.1    DS231824    EDS27409.1    OUUW01000003    SPP77899.1    AXCN02002216    AXCM01000572    CH477318    EAT43716.1    CP012528    ALC49375.1    ATLV01018418    KE525233    KFB43110.1    MF684347    ASX93981.1    JF835057    AFH54193.1    ADMH02002005    ETN60006.1    GANO01001300    JAB58571.1    UFQT01000959    SSX28189.1    KJ702226    AID61380.1    GBYB01000511    JAG70278.1    NEVH01016967    PNF24798.1    KK107260    QOIP01000001    EZA54128.1    RLU27313.1    KQ774645    OAD52306.1    KR058859    ALG65076.1    GEZM01051744    JAV74723.1    KP859375    AKZ17685.1    KK852530    KDR21921.1    KZ288312    PBC28377.1    LJIG01009597    KRT82761.1    KQ971368    KYB25634.1    GBBI01002060    JAC16652.1    CVRI01000066    CRL05883.1    DS235327    EEB14713.1    KX609518    ARN17925.1    KQ434890    KZC10452.1    KQ435936    KOX68309.1    KM217007    AIW79970.1    KR012853    ALD15928.1    GFTR01006918    JAW09508.1    KC701467    AGI92302.1    GFDF01000647    JAV13437.1    GBHO01005737    GDHC01007258    JAG37867.1    JAQ11371.1    KQ978496    KYM93624.1    GL446201    EFN88284.1    KK854379    PTY15275.1    GECU01021999    JAS85707.1    GL434776    EFN74585.1    KQ414646    KOC66607.1    KQ976438    KYM86820.1    ADTU01012323   
Pfam
PF00067   p450        + More
PF00089   Trypsin
Interpro
IPR036396   Cyt_P450_sf        + More
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR002401   Cyt_P450_E_grp-I       
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       
IPR008067   Cyt_P450_E_grp-I_CYP2A-like       
IPR008069   Cyt_P450_E_grp-I_CYP2D-like       
SUPFAM
SSF48264   SSF48264        + More
SSF50494   SSF50494       
Gene 3D
PDB
5E58     E-value=3.52594e-73,     Score=700

Ontologies

Topology

Subcellular location
Endoplasmic reticulum membrane  
Microsome membrane  
Length:
514
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.4632
Exp number, first 60 AAs:
0.12625
Total prob of N-in:
0.01562
outside
1  -  514
 
 

Population Genetic Test Statistics

Pi
185.639059
Theta
171.104208
Tajima's D
0.30313
CLR
0.377874
CSRT
0.452177391130443
Interpretation
Uncertain
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