SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05790
Pre Gene Modal
BGIBMGA006935
Annotation
PREDICTED:_transmembrane_protein_132B_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.407
 

Sequence

CDS
ATGGAACGGTGCCGGCTGGATGTTTCGGCTCATTTAGTCTTCCGAGAACTGCCCCGAGACTCGCCTGTACTACGTGTACTGTTTCACACAGGGGGGGAAGGTGCACGAAGAGCAGCATCTAGACCTCGACGTGTTTGCATAACATTGCATGCGAGTCTTGGATCGAAATCGTTAACGGCCACATGTGGTCCAGAAGGCGAAGAGGGGGCTTGCTTGGCTGAATTAACAGTTCCTGCAGCGTGGTGGCCAGCTGACGGTAAAGGAAAAAGACCACCAAGAACTGTTAGGTTAGCTTACAGTGCCACAGAAGCTGGCAATGGTGAATCCGGAGAGGATACGTGCGGTCGGGTCTCAGTACAACCAGCCTGGCCATTGGGATCCGTGATTCTTGCGGGTGCAAGAGCAGGTTATAGAGAAGCAAGAGCCGGCGATGCAGCCCTCCTTCTACCACGAGCACCTCTGTATCCGCATTCTAGAATACATTTACCTTTTGTTGTTCGTCGTGACAGTTCTCACAATATAGGACACGTTGCCATCAGAATGAAAGTCAAGTCGGGATTGAGGCTGCTAAGTGTTACGGCTGCCAACTCGCGCTGGGCTGTCACTTCAGAAGTAAAGATGCGCTCTGCGACTGTCACAGCTACAAGATTGGAGCAGCCACTGCGGGATGATGACGATATTGACTTTGATGAAGAAGAAACTATTGGAGCCGGAGGTCCTGGTTGGGAAGAAGTACTTACTTGGCTGGTGGAAGTTGGGCCTGAAGGTGAAGGTGACGCTGAGGGGTCCGAAGGCGAATCTGGAAGGGGTACAGCACGTTTGAGCTGGTCAGCCAAAGTTTCTCCAATAATATCTTCGTCTTCAACCACTGCTGAACCACCTCACGAACGGGTCAATACACGTTTGGATATTGAAAAAGATGATATACAAGCTGTTTTGCCGATCTCAAAGAACTGGGAGGTACTGAATACAGCCGTATTGACTGGACGTCAAGTGTCACAGTCAATGAAGGTACTCATAGTCTCTCAAGCGGGACAAGTGGCTGACGTCACATTACAGAGCTCCTGTCATTCGGAAGACGAGAGCGTTCTCAAGGTGTCATCGTCGTGCAGCTCCGTTTATGTAGATGGCTCCGAGATTCGTGGCTCATCGAACGCGTCCGTGATAGTGAAATACGGAACGTACACCGGCCTGGCAAGATTCACTGTTTGGATGCCTGAGAATCCTCTAGAAATTGATGTGGATGACAACAGATTATCCCAAATTAAAGGTTGGAAGGTGTCTGACGATGCAAGTTCAAAAGACAGACAGCGACGATCATTGTCGGCTCGAGGCTGGGGCGGATCTAGATCTGACGGCACTAACTCTTTGACGGATCAACGCTCTTGTCGATTGAGATATCAGCAGAGCAACGTAGAGGTGTACGCTCGTTTTCTTGCAAAAGATCACGACTCTGGAAGGGTGTCGTATTTCGTGTCTCGTCGAACTTGGCTTAAAGTTACCGAGCTCGTGATGTCGTTGATGCGTGTCGCCGACTTGCGCATCGCAACATTAAGAGGGAAACTTCTTCAGGGCCGGAGTACCGGCAGAACAGAGGTTCAAGTCTTATCCCCTATAACTGGTCGTGTTATCGGCGTCCGTGAAGTCCGTGTTGGTAACGACAAAGTATCGATCTCAAGGTTACTTGTTCGTGTGATATCTGGCCTTCAACTTAACATCTCTCCGGACTCGGCTATAGAAAATGGATATGTTTCCGAAACGACAGTCACGAGACGATTAACAGCACAATATCAGGAAGGTCTATTGGACATTGATATCGAGTATTCGGACGGAAGTCACACTCCGCTTCGCGATGTGGCCGTATCTGACTACTTTTTACTAGTCGAGAGCCTCGATCCCGAAGTTGTGGCTTTTGCGCCAATGTTGGCTTCCAAGCACCCACGTGTGATTGCTGTTGGTGAAGGCAGCGGTGAACTTCTTCGTGTGACTTTGTTAACGCCTGAACAATGTCGTTCCGGGCCAATACGACGCGTTGCGCTTCCCGGGAAAGGTGACGCAAAGACTCCGGCTAACATTAAAAACATTCCTGGGGCATTGGCCACGGCGGCTGCGAGCGTAGATGTCGACTTCAGCGGGGGAGATGCACCACAGAGACCGGATACGCCGCAGAACGATGATATTATGGCCAGAGGAGGACTTCGAAGTGGATTGTCGGACCTTAGCGACGTGTTGAAGGGTATATCGCCGTTCAAAGACGAAAACAACCATGAACCGACAGTGCAGGCGCAACATTACAATTCGATCTTCCGAAGCAACCCCGCGCAGCACCCCCGACAACATCAATCAACCGTCATGACGCCGGTTGAAATAGGAATGTACGTTCTCCTTGGTGCTTTCTGCTTCGCGATAGTAGTATTCGTCGTATCATGTGTGGTGTACGCTTCTCGTCTGAAGCCGGCCGGACCAGAAGGAGGCACGGGTATGTGCCGCAAGATACCGGCACTAGCTGAAGGGGGGCGGTTGCAGGTCGCAGGACTAGTGGGAACTACGCTCGGACTGGCCAGGGACAAGCCCACAAGGGAATCCACAACAAACGCTCATGATTGGGTTTGGCTAGGCAGGGCAACGATGGAGAGAAGCGGCAATCGTCATCAAGCCAATCGCAATTCCACACAAGTTCCGGACAACGGCAATCAAGAGATCAGGATCACGGCTAATCCTCTAAACTACAACTATGTTGATCCCGATGACGCGATACGAGATAACGGAAACGTTATGGTCACAAGTTTCGACAATCCAAACTCAATTGAGTTGCCATCGCAAAACGACACGAGAGTTATCGATTCCACGACTTACTGTAAGAAACCAGCTCGGCACACCCGTCAATCGTCTGGAGATGGACATTGGCAGTCGGAGCCCAACAATCCGGACGACTACCGACCGCCGGTGCCGCCACACCGACACTCCTCTACCATTCAACAGTCGCAGTTGCCCGTACCCCCACGAAATCCGAACAAAATTTTGCCCGAAGCGGTTATGCCACCAGCTAGACGAAGCCACTCAAGAAATCACAAAAAATACGAACGCGAACACGAACCCACGAAGAGATCCCCGGAAAACGCCCGCCGCTCAGACCGAATTATTGATCTAAACAAAACGGACGCACCATACGTAACGAGCAGAGATATAAGCCAGTATAAACGTGATTCGGATCCGATGCAAAACTTAAATGACTTTGATGATAACCCGGTTGAGAAACTCACGAACAAGGACGATTGCGCTCGCCTGTTTGAATTTGACAACGACGCTCCTCTGATCATGGAGAACAAGGACTACAGAGAGATAGTGGGACTGAACAGAGGTACCGACGATTCCCGACGAACATTCGCGAAGCCAGAAAGCCCTGATTACATGCACGACTCTGGAATAGGCCTACCGGACATGCAGATTCGTTATAAGAACAAAGCCAAGGAACCCAAAGGAGATTTTGTCGAGTCTGCAAACCAAAACAAACCAAGCAGCTCTCCCGAAGTGAAACGCGCCACTATAGTAGGCAACCCGATGTTCTCACGCGAGGAGCGCCGCGACCCCCCCGCGGAGGCCCTGGGACTCGACGACCTCCACATGGATTACGATCAGATCATGCACTATTTCCACAACCTCAAGGAATCGAACGCCTGA
Protein
MERCRLDVSAHLVFRELPRDSPVLRVLFHTGGEGARRAASRPRRVCITLHASLGSKSLTATCGPEGEEGACLAELTVPAAWWPADGKGKRPPRTVRLAYSATEAGNGESGEDTCGRVSVQPAWPLGSVILAGARAGYREARAGDAALLLPRAPLYPHSRIHLPFVVRRDSSHNIGHVAIRMKVKSGLRLLSVTAANSRWAVTSEVKMRSATVTATRLEQPLRDDDDIDFDEEETIGAGGPGWEEVLTWLVEVGPEGEGDAEGSEGESGRGTARLSWSAKVSPIISSSSTTAEPPHERVNTRLDIEKDDIQAVLPISKNWEVLNTAVLTGRQVSQSMKVLIVSQAGQVADVTLQSSCHSEDESVLKVSSSCSSVYVDGSEIRGSSNASVIVKYGTYTGLARFTVWMPENPLEIDVDDNRLSQIKGWKVSDDASSKDRQRRSLSARGWGGSRSDGTNSLTDQRSCRLRYQQSNVEVYARFLAKDHDSGRVSYFVSRRTWLKVTELVMSLMRVADLRIATLRGKLLQGRSTGRTEVQVLSPITGRVIGVREVRVGNDKVSISRLLVRVISGLQLNISPDSAIENGYVSETTVTRRLTAQYQEGLLDIDIEYSDGSHTPLRDVAVSDYFLLVESLDPEVVAFAPMLASKHPRVIAVGEGSGELLRVTLLTPEQCRSGPIRRVALPGKGDAKTPANIKNIPGALATAAASVDVDFSGGDAPQRPDTPQNDDIMARGGLRSGLSDLSDVLKGISPFKDENNHEPTVQAQHYNSIFRSNPAQHPRQHQSTVMTPVEIGMYVLLGAFCFAIVVFVVSCVVYASRLKPAGPEGGTGMCRKIPALAEGGRLQVAGLVGTTLGLARDKPTRESTTNAHDWVWLGRATMERSGNRHQANRNSTQVPDNGNQEIRITANPLNYNYVDPDDAIRDNGNVMVTSFDNPNSIELPSQNDTRVIDSTTYCKKPARHTRQSSGDGHWQSEPNNPDDYRPPVPPHRHSSTIQQSQLPVPPRNPNKILPEAVMPPARRSHSRNHKKYEREHEPTKRSPENARRSDRIIDLNKTDAPYVTSRDISQYKRDSDPMQNLNDFDDNPVEKLTNKDDCARLFEFDNDAPLIMENKDYREIVGLNRGTDDSRRTFAKPESPDYMHDSGIGLPDMQIRYKNKAKEPKGDFVESANQNKPSSSPEVKRATIVGNPMFSREERRDPPAEALGLDDLHMDYDQIMHYFHNLKESNA

Summary

EMBL
BABH01024436    BABH01024437    BABH01024438    ODYU01008616    SOQ52351.1    KQ459302    + More
KPJ01791.1    KZ149900    PZC78567.1    KQ461175    KPJ07825.1    GEZM01030278    JAV85653.1    GEZM01030274    JAV85657.1    GEZM01030276    JAV85655.1    GEZM01030275    JAV85656.1    GEZM01030273    JAV85658.1    GEZM01030277    JAV85654.1    JXUM01092324    JXUM01092325    KQ563979    KXJ72988.1    GEDC01016444    JAS20854.1    CH477318    EAT43715.1    GFDL01005461    JAV29584.1    GFDL01005426    JAV29619.1    GFDL01005454    JAV29591.1    GFDL01005502    JAV29543.1    GFDL01005462    JAV29583.1    GDUN01001047    JAN94872.1    CVRI01000040    CRK95087.1    GECZ01017216    JAS52553.1    ADMH02002005    ETN60007.1    GECZ01011051    JAS58718.1    DS231824    EDS27408.1    AAAB01008977    EAA13567.6    ATLV01018422    KE525233    KFB43112.1    KQ976639    KYM78825.1    KQ977279    KYN04024.1    NNAY01000452    OXU28292.1    GBXI01001899    JAD12393.1    KQ982398    KYQ56871.1    CH379064    EAL32149.3    KB631865    ERL86780.1    CH954180    EDV47347.2    OUUW01000011    SPP86332.1    SPP86333.1    AE014298    AHN59403.1    CCAG010007471    AHN59404.1    AAF46133.2    AFH07261.1    CM000366    EDX17236.1    CM000162    EDX00985.2    CH480819    EDW52970.1    KRK05864.1    GDHF01013389    JAI38925.1    CH964291    EDW86376.2    GAMC01003910    JAC02646.1    CH902621    EDV44484.2    CP012528    ALC48483.1    KQ435700    KOX80512.1    CH940655    EDW66252.2    CH933812    EDW05868.2    GDHF01011493    JAI40821.1    JRES01000520    KNC30454.1    GECU01000736    JAT06971.1    CH916371    EDV91764.1    CH479248    EDW37907.1    APCN01008384    GBBI01004218    JAC14494.1    JXJN01015633    JXJN01015634    JXJN01015635   
Pfam
PF15705   TMEM132D_N        + More
PF16070   TMEM132
PF15706   TMEM132D_C
PF05826   Phospholip_A2_2
Interpro
IPR031437   TMEM132_M        + More
IPR031435   TMEM132_N       
IPR026307   TMEM132       
IPR031436   TMEM132_C       
IPR036444   PLipase_A2_dom_sf       
IPR016090   PLipase_A2_dom       
SUPFAM
SSF48619   SSF48619       
Gene 3D

Ontologies

Topology

Length:
1226
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.66667
Exp number, first 60 AAs:
0.00051
Total prob of N-in:
0.02197
outside
1  -  789
TMhelix
790  -  812
inside
813  -  1226
 
 

Population Genetic Test Statistics

Pi
229.047313
Theta
184.716572
Tajima's D
0.191608
CLR
0.428229
CSRT
0.424128793560322
Interpretation
Uncertain
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