Gene

KWMTBOMO05784  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006932

Annotation

PREDICTED:_NECAP-like_protein_CG9132_[Bombyx_mori]

Location

Bomo_Chr10(+):9887336-9893389      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.914

CDS

ATGGATACTTATGAAAGTGTTATTTTAGTGAAGAACGAAGTATTCGTTTTTAAAATACCACCCAGAACATCTAACAGAGGATACAGGGCAGCAGATTGGAACTTGCAAGAGCCACAATGGACAGGTCGCATGAGGTTGGTGTCAAAAGGGAACGAGTTGGTCATGAAGTTAGAGGATAAAACAAGTGGCGAATTATTTGCGAAGTGCCCAATAGATAAATATCCAGGAGTTGCACTGGAAGCTGTAACTGATAGCTCACGATATTTTGTTGTGAAAATACAAGATGATAATGGTTGTGCTGCATATATCGGTCTTGGATTTGGTGATAGATCTGATTCGTTTGATCTAAATGTTGCACTTCAAGACCATTTCAAATGGTTGAAAAAAGAACAAGAGAGCGATCAAACACCACAGGGACAATTGGATCTTGGATTTAAAGATGGTGAAACAATTAAAATCAACATGAAAATTACTAAAAAAGATGGGAGTGAGGGCAGCAGGTCACGCCGTGGTGTGCCAGGTGCTAGTGGTGGTGGTTTGTTGCCACCACCTCCAGGCGGTTCTAAGTTACCACCTCCACCATCACCACAACATGCTGCTTCACCATCATCAATCCCACCTGCCAGCTCTAACACAGAGTGGGGTGAATTTAATTCAGCAAGTGCTCCAGAACCACAAGCAACAACCCCAGCCAATCAACAAAATTGGGTGCAGTTCTGA

Protein

MDTYESVILVKNEVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDDNGCAAYIGLGFGDRSDSFDLNVALQDHFKWLKKEQESDQTPQGQLDLGFKDGETIKINMKITKKDGSEGSRSRRGVPGASGGGLLPPPPGGSKLPPPPSPQHAASPSSIPPASSNTEWGEFNSASAPEPQATTPANQQNWVQF

Uniprot

A0A2A4JNP0   A0A2H1W7X8   A0A2W1BW55   A0A3S2MAM7   A0A194Q9X7   A0A194RGD6   + More
S4NPX1   A0A212ENZ0   A0A1Y1KPH9   D6X1A3   B0XD83   A0A1Q3EZA2   A0A1Q3EZF0   A0A1Q3EZB2   A0A182GPJ2   T1I3S8   A0A1B0CHK8   A0A0L7QNP9   A0A0V0G5K2   A0A224XRM0   A0A023F439   A0A069DR24   A0A1L8DAU9   A0A2A3EDW9   A0A088A7I9   A0A026WT72   A0A0A9WV73   U5EZQ1   A0A0K8TNX5   E2BXA6   A0A1B0DNM5   A0A182JFS4   A0A0P5E8W3   A0A146LY01   A0A084VJF4   A0A0P4XPH5   A0A0P5U6W0   A0A2M4BX58   A0A0P5J5P3   A0A0P5ZJR5   W5JNR6   A0A0T6AWX8   A0A182FB23   A0A0P6C4X2   A0A164WP81  

Pubmed

28756777    26354079    23622113    22118469    28004739    18362917    + More
19820115    26483478    25474469    26334808    24508170    30249741    25401762    26823975    26369729    20798317    24438588    20920257    23761445   

EMBL

NWSH01000905    PCG73591.1    ODYU01006887    SOQ49133.1    KZ149900    PZC78571.1    + More
RSAL01000003    RVE54872.1    KQ459302    KPJ01795.1    KQ460398    KPJ14996.1    GAIX01013411    JAA79149.1    AGBW02013613    OWR43171.1    GEZM01082507    JAV61346.1    KQ971372    EFA09517.2    DS232745    EDS45337.1    GFDL01014415    JAV20630.1    GFDL01014369    JAV20676.1    GFDL01014403    JAV20642.1    JXUM01015121    JXUM01015122    JXUM01015123    KQ560423    KXJ82483.1    ACPB03021980    AJWK01012445    AJWK01012446    AJWK01012447    KQ414851    KOC60194.1    GECL01002869    JAP03255.1    GFTR01003958    JAW12468.1    GBBI01002481    JAC16231.1    GBGD01002728    JAC86161.1    GFDF01010483    JAV03601.1    KZ288279    PBC29674.1    KK107109    QOIP01000008    EZA59138.1    RLU19797.1    GBHO01035659    GBHO01035658    GBHO01032005    GBHO01032000    GBHO01002971    GDHC01006408    GDHC01003137    GDHC01000216    JAG07945.1    JAG07946.1    JAG11599.1    JAG11604.1    JAG40633.1    JAQ12221.1    JAQ15492.1    JAQ18413.1    GANO01000374    JAB59497.1    GDAI01001767    JAI15836.1    GL451230    EFN79689.1    AJVK01001445    GDIP01145062    JAJ78340.1    GDHC01007122    JAQ11507.1    ATLV01013556    KE524867    KFB38098.1    GDIP01238252    JAI85149.1    GDIP01118764    JAL84950.1    GGFJ01008516    MBW57657.1    GDIQ01210666    GDIQ01121543    JAK41059.1    GDIP01042977    JAM60738.1    ADMH02000974    ETN64540.1    LJIG01022648    KRT79451.1    GDIP01009138    JAM94577.1    LRGB01001151    KZS13450.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    UP000007266    + More
UP000002320    UP000069940    UP000249989    UP000015103    UP000092461    UP000053825    UP000242457    UP000005203    UP000053097    UP000279307    UP000008237    UP000092462    UP000075880    UP000030765    UP000000673    UP000069272    UP000076858   

Pfam

PF07933   DUF1681

Interpro

IPR011993   PH-like_dom_sf        + More
IPR012466   NECAP_PHear       

Gene 3D

2.30.29.30    

CDD

cd13228  PHear_NECAP

ProteinModelPortal

A0A2A4JNP0   A0A2H1W7X8   A0A2W1BW55   A0A3S2MAM7   A0A194Q9X7   A0A194RGD6   + More
S4NPX1   A0A212ENZ0   A0A1Y1KPH9   D6X1A3   B0XD83   A0A1Q3EZA2   A0A1Q3EZF0   A0A1Q3EZB2   A0A182GPJ2   T1I3S8   A0A1B0CHK8   A0A0L7QNP9   A0A0V0G5K2   A0A224XRM0   A0A023F439   A0A069DR24   A0A1L8DAU9   A0A2A3EDW9   A0A088A7I9   A0A026WT72   A0A0A9WV73   U5EZQ1   A0A0K8TNX5   E2BXA6   A0A1B0DNM5   A0A182JFS4   A0A0P5E8W3   A0A146LY01   A0A084VJF4   A0A0P4XPH5   A0A0P5U6W0   A0A2M4BX58   A0A0P5J5P3   A0A0P5ZJR5   W5JNR6   A0A0T6AWX8   A0A182FB23   A0A0P6C4X2   A0A164WP81  

PDB

1TQZ     E-value=3.27844e-47,     Score=472

KEGG

101746833    K20069 adaptin ear-binding coat-associated protein 1/2 | (RefSeq) NECAP-like protein CG9132

GO

GO:0016020   GO:0006897   GO:0030125   GO:0016021   GO:0009190   GO:0016849   GO:0004568   GO:0006032   GO:0006541   GO:0016812   GO:0016597  

Length:

239

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.04163

outside

1  -  239

 

 

Pi

152.015608

Theta

145.683626

Tajima's D

0.469336

CLR

0.014617

CSRT

0.499225038748063

Interpretation

Uncertain