SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05782
Annotation
NA
Location in the cell
PlasmaMembrane   Reliability : 4.831
 

Sequence

CDS
ATGTCATTTCGTTCACTGCACAATTCGTATTGCAAGACTTCGGAAAAATTTCTTAATGCATCAAAGGTATTGATCGAATCGTTGCTAAGAAAGCCATTGGCAATGACTTTAATAGCAGCCTGGTTATTAAATTTACTGCTTATATCTACGTTTTTTTCTGTAACTGTTATTTTGATGACCTCAACTATATTTCTAGTAATTGTATTTTTAGAAGGTGTTTTGTTCTTTTGGATTTTTTACATGTGCTGCGTAATTATCACTTTACTGGCCTTATTAATAATATCTACGATAGGATTTTTACAGCATGTTTATGAAACTTTATATGGAACAGAACCAAGAATAGTAAATATATCAGTTTTATAA
Protein
MSFRSLHNSYCKTSEKFLNASKVLIESLLRKPLAMTLIAAWLLNLLLISTFFSVTVILMTSTIFLVIVFLEGVLFFWIFYMCCVIITLLALLIISTIGFLQHVYETLYGTEPRIVNISVL

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
120
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
52.56845
Exp number, first 60 AAs:
21.39056
Total prob of N-in:
0.39879
POSSIBLE N-term signal
sequence
inside
1  -  44
TMhelix
45  -  67
outside
68  -  76
TMhelix
77  -  99
inside
100  -  120
 
 

Population Genetic Test Statistics

Pi
259.243641
Theta
195.973712
Tajima's D
0.930405
CLR
0
CSRT
0.64206789660517
Interpretation
Uncertain
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