Gene

KWMTBOMO05768

Annotation

reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr10(-):9631559-9634107      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.368 Nuclear   Reliability : 1.508

CDS

ATGAAGCTCGGTCGCGCTCCCGATTCCGTTCTCGTCACGAGGACTGTAGTGGATTGGCACACGCTGGGCATCAGCCTGGCTGAATCTGATCCACCATCGCTCCCGTTTAGCCCGGACTCTACCCCGTCTCCTCAAGACACCGTTGAAGCCATAGACATCTTAACGTCACACATCACCTCGACATTAGATAGGTCATCGAAACAAGTTGTAGCGGAGGACTTCCTTTACCGCTTCAAATTGCCCGACGATATTAGGGAACTCCTTAGAGCTAAGAATGCCTCGATACGCGCCTACGATAGGTATCCTACCGTGGATAATCGTATTCGAATGCGTGCCTTACTACGCGACGTAAAGTCTCGCATCGCCGAAGTCCGAGATGCCAGATGGTCTGATTTCTTAGAAGGACTCGCGCCCTCCCAAAGGTCTTACTACCGCTTAGCTCGCCCCTCAGGCCGACTCGCGGCGTTCGATGATGACGAAAAAGCAGAGCTGCTGGCTGATACATTGCAAGCCCAGTGCACGCCCAGCACTCAATCCGTGGACCCTGTTCATGTAGAATTAGTAGACAGTGAGGTAGAACGCAGAGTCTCCTTGCCACCCTCGGATGCGTTACCACCCGTCACCCCGATGGAAGTTAAAGACTTGATCAAAGACCTACGTCCTCGCAAGGCTCCCGGTTCCGACGGTATATCCAACCGCGTTATTAAACTCCTACCCGTCCAACTCATCGTGATGTTGGCATCTATTTTCAATGCCGCTATGGCGAACTGTATCTTTCCCGCAGTGTGGAAAGAAGCGGACGTTATCGGCATACATAAACCCGGTAAACCAAAAAATCATCCGACGAGCTACCGCCCGATTAGCCTCCTCATGTCTCTAGGCAAACTGTATGAGCGTCTGCTCTACAAACGCCTCAGAGACTTCGTCTCATCCAAGGGTATTCTCATCGATGAACAATTCGGATTCCGTACAAATCACTCATGCGTTCAACAGGTGCACCGCCTCACGGAGCACATTTTTGTGGGGCTAAATCGACCAAAACCGTTATACACGGGAGCTCTCTTCTTCGACGTCGCAAAAGCGTTCGACAAAGTCTGGCACAACGGTTTCATTTTCAAACTATTCAACATGGGCGTGCCGGATAGTCTCGTGCTCATCATACGGGACTTCTTGTCGAACCGCTCTTTTCGATATCGAGTCGAGGGAACCCGCTCCTCCCCACGACCTCTCACAGCTGGAGTCCCGCAAGGCTCTGTTCTTTCACCCCGCCTGTTTAGCTTATTCGTCAACGATATTCCCCGGTCGCCGCCGACCCAGTTAGCTTTATTCGCCGACGACACGACTGTTTACTATTCCAGTAGAAACAAGTCCCTAATCACGAAGAAGCTTCAGAGCGCAGCCATAGCCCTAGGACAGTGGTTAGCCGTCGGAGCTCCGTGGTTCGTGAGGAACGTTGACCTGCACGACGACCTGGGCCTCGAGTCTATCCAGAAATACATGAAATCAGCGTCGGAACGGTACTTCGCTAAGGCTATGCGTCATGATAATCGCCTTATCGTTGCCGCCGTTGACTACTCCCCGAATCCTGATCACGCAGCAGCCAGTCACCGTCGACGCCTTAAACACGTCCTTACGGATCCATCAGATCCAATAACCTTTGCATTAGACGCCTTCAGCTCTAACACTAGGAGCAGGCTTAGGGACCCCGGTAACCGTACTCGTCGAACTCGACAAAGAGTTCGCCATGCAACCTAA

Protein

MKLGRAPDSVLVTRTVVDWHTLGISLAESDPPSLPFSPDSTPSPQDTVEAIDILTSHITSTLDRSSKQVVAEDFLYRFKLPDDIRELLRAKNASIRAYDRYPTVDNRIRMRALLRDVKSRIAEVRDARWSDFLEGLAPSQRSYYRLARPSGRLAAFDDDEKAELLADTLQAQCTPSTQSVDPVHVELVDSEVERRVSLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSLGKLYERLLYKRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIFVGLNRPKPLYTGALFFDVAKAFDKVWHNGFIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSVLSPRLFSLFVNDIPRSPPTQLALFADDTTVYYSSRNKSLITKKLQSAAIALGQWLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFAKAMRHDNRLIVAAVDYSPNPDHAAASHRRRLKHVLTDPSDPITFALDAFSSNTRSRLRDPGNRTRRTRQRVRHAT

Uniprot

Q93137   Q9BPQ0   Q9XXW0   A0A0N1PFV1   O96546   A0A1Y1NA23   + More
A0A2S2PR14   V5GNJ2   A0A2S2Q352   J9KKL3   K7IN67   A0A2S2QEE0   A0A2H8U0H5   V5GNF3   A0A023EYS8   A0A2S2PWA8   A0A2S2PPK8   X1WXE6   A0A224XF24   J9LC21   A0A2J7R7D0   A0A023F6S4   A0A224X7Z3   J9JS95   A0A069DZC5   X1WN18   A0A069DW01   J9KLB1   X1WZH0   J9KCZ4   A0A2S2PA10  

Pubmed

10333566    26354079    10380107    28004739    20075255    25474469    + More
26334808   

EMBL

U07847    AAA17752.1    AB055391    BAB21761.1    AB018558    BAA76304.1    + More
KQ459265    KPJ02064.1    AF081103    AAC72921.1    GEZM01008457    JAV94772.1    GGMR01019198    MBY31817.1    GALX01005299    JAB63167.1    GGMS01002955    MBY72158.1    ABLF02029306    ABLF02029314    ABLF02060138    GGMS01006359    MBY75562.1    GFXV01007093    MBW18898.1    GALX01005359    JAB63107.1    GBBI01004395    JAC14317.1    GGMS01000625    MBY69828.1    GGMR01018716    MBY31335.1    ABLF02016634    GFTR01008038    JAW08388.1    ABLF02036316    ABLF02036319    ABLF02048663    ABLF02066977    NEVH01006736    PNF36716.1    GBBI01001646    JAC17066.1    GFTR01007929    JAW08497.1    ABLF02028535    ABLF02028545    GBGD01000880    JAC88009.1    ABLF02021177    ABLF02027367    ABLF02066338    GBGD01000799    JAC88090.1    ABLF02040174    ABLF02040183    ABLF02055266    ABLF02034467    ABLF02008463    GGMR01013409    MBY26028.1   

Proteomes

UP000053268    UP000007819    UP000002358    UP000235965   

PRIDE

Q93137    Q9BPQ0    Q9XXW0   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF07530   PRE_C2HC
PF03372   Exo_endo_phos
PF10551   MULE

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR006579   Pre_C2HC_dom       
IPR013083   Znf_RING/FYVE/PHD       
IPR018289   MULE_transposase_dom       

SUPFAM

SSF56219   SSF56219       

Gene 3D

3.60.10.10     3.30.40.10    

ProteinModelPortal

Q93137   Q9BPQ0   Q9XXW0   A0A0N1PFV1   O96546   A0A1Y1NA23   + More
A0A2S2PR14   V5GNJ2   A0A2S2Q352   J9KKL3   K7IN67   A0A2S2QEE0   A0A2H8U0H5   V5GNF3   A0A023EYS8   A0A2S2PWA8   A0A2S2PPK8   X1WXE6   A0A224XF24   J9LC21   A0A2J7R7D0   A0A023F6S4   A0A224X7Z3   J9JS95   A0A069DZC5   X1WN18   A0A069DW01   J9KLB1   X1WZH0   J9KCZ4   A0A2S2PA10  

KEGG

101737297    no KO assigned | (RefSeq) esterase FE4-like

GO

GO:0003964   GO:0004519  

Length:

584

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.65353999999999

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.05100

outside

1  -  584

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain