Gene

KWMTBOMO05763

Pre Gene Modal

BGIBMGA006800

Annotation

PREDICTED:_corepressor_interacting_with_RBPJ_1_[Amyelois_transitella]

Location

Bomo_Chr10(-):9532239-9535377      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.117

CDS

ATGGGAAAGGGATTCAATAACTATATGTGTAAAAAATTCTTCCATCCCGCTTCAAGAGACAATTTGAAAAGGGTATGGATGGCAGAACAGAAAACAGATGCATACAAGAAAAAACAAGAAGAATTGCGATTACAATATGAAAAAGAACAGGATCTACATGAGAACAAAGCATTACTAAGTAAAGAAAGTAAAGACAAATTGAGTTTAAACTTCATGTATGAGCCTCCTCCTGGTGTAAAGAAAGAAAGGGAAAGAGAAGACAATGAACCAGAATATAAATTTGAATGGCAAAGGAAATACAATGCTCCTAGAGAAAGCTATTGTAAAGGAGACAATGAAATCAGAGATCAGCCTTTTGGTATACTTGTCAGGAATGTAAGATGCATTAAGTGTCATAAGTGGGGACATATCAATACAGATAAGGAATGTACAATGTATACACTGTCCATGAGTGAGGCACGTGCATTACAAGCATCGACTTCAACTCCTGAAGAAAAGGAAGAAAAACCAGATGTACCAACTCTCATGCAACAGATGCGTGACACGGGCCTCATCATGAAACCGGGAGCACTGCCTCTGACTGCTGCTAAGGTTGAAGATAATGACTCTACTAATCTTACTGAGCATGACCTGATCAGTCAACTAAGCAAAAAACAAAAGAAAAAGTTATTGAAGAAATTGGAAAAATTGGAAAAGAAGAAGGAGAAGAAACTCAGGAATAAATCAAAACACTGA

Protein

MGKGFNNYMCKKFFHPASRDNLKRVWMAEQKTDAYKKKQEELRLQYEKEQDLHENKALLSKESKDKLSLNFMYEPPPGVKKEREREDNEPEYKFEWQRKYNAPRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTSTPEEKEEKPDVPTLMQQMRDTGLIMKPGALPLTAAKVEDNDSTNLTEHDLISQLSKKQKKKLLKKLEKLEKKKEKKLRNKSKH

Uniprot

H9JBA5   A0A2H1X2N5   A0A2H1WKI5   S4PY12   A0A1E1WIP8   A0A194RC11   + More
A0A1E1WI85   A0A212F673   I4DK85   A0A0L7LE56   A0A2A4JNQ4   A0A1L8DGB5   B4N4T1   A0A1I8MDD8   A0A1I8MDD1   A0A1W4UQW6   A0A0K8TSA8   A0A232F9P9   B3M854   B4KZ74   A0A0M4EZ05   Q29DK5   D6X1Z0   A0A1I8PWB5   A0A1A9ZDW5   A0A1B0GF74   A0A1Y1KP25   A0A3B0JZJ3   B4H6U8   K7IVI1   B4IYD4   Q4V5B9   B4LD48   A0A1A9UKQ2   Q4V5A0   Q9VVU4   Q4V5B3   A0A1A9WLM1   B3NDV2   A0A0L7QS45   A0A0C9RFE6   E2BI47   T1GE60   B4PH29   A0A2A3E3C6   A0A088A3I0   A0A1A9XJV8   A0A195DUI4   A0A154P0R5   B4PH21   A0A195CB29   A0A1B0C6P3   B4IFX3   W8AP55   A0A026WWQ3   A0A151WRX9   F4W872   A0A1L8DGE9   A0A158NQH8   B4QPY0   U4UZD2   U5EP24   A0A0K8WI74   A0A0K8VLA4   Q8MSD2   N6TD89   A0A182SU87   E2AKL4   A0A0L0C8H7   A0A182N1Z0   A0A182YR55   A0A182PTV3   A0A182TVP2   A0A182RE49   A0A182JVZ9   A0A084WE15   Q7Q7Y6   A0A182XEG7   A0A182KNQ0   A0A182HQL0   A0A182LT11   A0A182UT08   A0A182J6X8   A0A182WM18   A0A182QZ55   A0A336LPJ6   A0A1W4XKY2   A0A1J1IU49   W5JW56   J9JK92   A0A1B6DE28   A0A2M3ZC49   A0A2M4CIW8   A0A2M4CJ55   A0A2S2NGD7   A0A182FLB2   A0A2M4BUM6   A0A2W1C0U9   A0A2M4AVG7   A0A0A9XY63  

Pubmed

19121390    23622113    26354079    22118469    22651552    26227816    + More
17994087    25315136    26369729    28648823    15632085    18362917    19820115    28004739    20075255    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    20798317    17550304    24495485    24508170    30249741    21719571    21347285    22936249    23537049    26108605    25244985    24438588    12364791    14747013    17210077    20966253    20920257    23761445    28756777    25401762   

EMBL

BABH01030970    ODYU01012939    SOQ59486.1    ODYU01009272    SOQ53569.1    GAIX01004093    + More
JAA88467.1    GDQN01004189    JAT86865.1    KQ460398    KPJ15014.1    GDQN01004437    JAT86617.1    AGBW02010077    OWR49209.1    AK401703    KQ459302    BAM18325.1    KPJ01809.1    JTDY01001572    KOB73491.1    NWSH01000887    PCG73677.1    GFDF01008591    JAV05493.1    CH964095    EDW79155.1    GDAI01000788    JAI16815.1    NNAY01000576    OXU27591.1    CH902618    EDV40993.1    CH933809    EDW18900.1    CP012525    ALC43837.1    CH379070    EAL30409.1    KQ971371    EFA10189.1    CCAG010012769    GEZM01083061    JAV61196.1    OUUW01000002    SPP76528.1    CH479215    EDW33536.1    CH916366    EDV97607.1    BT022737    AAY55153.1    CH940647    EDW69929.1    BT022756    AAY55172.1    AE014296    AAF49213.2    BT022743    AAY55159.1    CH954178    EDV52306.1    KQ414758    KOC61465.1    GBYB01011837    JAG81604.1    GL448450    EFN84618.1    CAQQ02001834    CAQQ02001835    CAQQ02001836    CAQQ02001837    CM000159    EDW95399.1    KZ288403    PBC26210.1    KQ980322    KYN16570.1    KQ434783    KZC04730.1    EDW95391.1    KQ978023    KYM98012.1    JXJN01026846    CH480834    EDW46560.1    GAMC01016002    GAMC01016000    JAB90555.1    KK107078    QOIP01000011    EZA60510.1    RLU16429.1    KQ982803    KYQ50551.1    GL887898    EGI69567.1    GFDF01008639    JAV05445.1    ADTU01023312    CM000363    CM002912    EDX11008.1    KMZ00466.1    KI207661    KI209954    ERL95715.1    ERL96116.1    GANO01003852    JAB56019.1    GDHF01001537    JAI50777.1    GDHF01012648    JAI39666.1    AY118894    AAM50754.1    APGK01042540    APGK01042541    KB741006    ENN75678.1    GL440304    EFN66024.1    JRES01000760    KNC28532.1    ATLV01023101    KE525340    KFB48459.1    AAAB01008948    EAA10368.2    APCN01004655    AXCM01003001    AXCN02000977    UFQT01000101    SSX19982.1    CVRI01000059    CRL03108.1    ADMH02000266    ETN67189.1    ABLF02040714    GEDC01013406    JAS23892.1    GGFM01005332    MBW26083.1    GGFL01001108    MBW65286.1    GGFL01001107    MBW65285.1    GGMR01003237    MBY15856.1    GGFJ01007572    MBW56713.1    KZ149900    PZC78586.1    GGFK01011287    MBW44608.1    GBHO01019801    GBHO01019800    GBRD01001713    GBRD01001711    JAG23803.1    JAG23804.1    JAG64108.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000037510    UP000218220    + More
UP000007798    UP000095301    UP000192221    UP000215335    UP000007801    UP000009192    UP000092553    UP000001819    UP000007266    UP000095300    UP000092445    UP000092444    UP000268350    UP000008744    UP000002358    UP000001070    UP000008792    UP000078200    UP000000803    UP000091820    UP000008711    UP000053825    UP000008237    UP000015102    UP000002282    UP000242457    UP000005203    UP000092443    UP000078492    UP000076502    UP000078542    UP000092460    UP000001292    UP000053097    UP000279307    UP000075809    UP000007755    UP000005205    UP000000304    UP000030742    UP000019118    UP000075901    UP000000311    UP000037069    UP000075884    UP000076408    UP000075885    UP000075902    UP000075900    UP000075881    UP000030765    UP000007062    UP000076407    UP000075882    UP000075840    UP000075883    UP000075903    UP000075880    UP000075920    UP000075886    UP000192223    UP000183832    UP000000673    UP000007819    UP000069272   

PRIDE

H9JBA5    Q4V5B9    Q4V5A0    Q9VVU4    Q4V5B3    Q8MSD2    + More

Pfam

PF10197   Cir_N

Interpro

IPR019339   CIR_N_dom        + More
IPR040014   CIR1       
IPR009056   Cyt_c-like_dom       

ProteinModelPortal

H9JBA5   A0A2H1X2N5   A0A2H1WKI5   S4PY12   A0A1E1WIP8   A0A194RC11   + More
A0A1E1WI85   A0A212F673   I4DK85   A0A0L7LE56   A0A2A4JNQ4   A0A1L8DGB5   B4N4T1   A0A1I8MDD8   A0A1I8MDD1   A0A1W4UQW6   A0A0K8TSA8   A0A232F9P9   B3M854   B4KZ74   A0A0M4EZ05   Q29DK5   D6X1Z0   A0A1I8PWB5   A0A1A9ZDW5   A0A1B0GF74   A0A1Y1KP25   A0A3B0JZJ3   B4H6U8   K7IVI1   B4IYD4   Q4V5B9   B4LD48   A0A1A9UKQ2   Q4V5A0   Q9VVU4   Q4V5B3   A0A1A9WLM1   B3NDV2   A0A0L7QS45   A0A0C9RFE6   E2BI47   T1GE60   B4PH29   A0A2A3E3C6   A0A088A3I0   A0A1A9XJV8   A0A195DUI4   A0A154P0R5   B4PH21   A0A195CB29   A0A1B0C6P3   B4IFX3   W8AP55   A0A026WWQ3   A0A151WRX9   F4W872   A0A1L8DGE9   A0A158NQH8   B4QPY0   U4UZD2   U5EP24   A0A0K8WI74   A0A0K8VLA4   Q8MSD2   N6TD89   A0A182SU87   E2AKL4   A0A0L0C8H7   A0A182N1Z0   A0A182YR55   A0A182PTV3   A0A182TVP2   A0A182RE49   A0A182JVZ9   A0A084WE15   Q7Q7Y6   A0A182XEG7   A0A182KNQ0   A0A182HQL0   A0A182LT11   A0A182UT08   A0A182J6X8   A0A182WM18   A0A182QZ55   A0A336LPJ6   A0A1W4XKY2   A0A1J1IU49   W5JW56   J9JK92   A0A1B6DE28   A0A2M3ZC49   A0A2M4CIW8   A0A2M4CJ55   A0A2S2NGD7   A0A182FLB2   A0A2M4BUM6   A0A2W1C0U9   A0A2M4AVG7   A0A0A9XY63  

KEGG

101746037    K06066 CBF1 interacting corepressor | (RefSeq) corepressor interacting with RBPJ 1

PATHWAY

04330    Notch signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0003714   GO:0009055   GO:0046872   GO:0020037   GO:0005634   GO:0045892   GO:0016021  

PANTHER

PTHR13151  

Length:

244

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.12306

outside

1  -  244

 

 

Pi

117.849375

Theta

190.999618

Tajima's D

-1.222137

CLR

1235.447427

CSRT

0.100994950252487

Interpretation

Uncertain