SGID The Silkworm Genome Information Database
Gene
KWMTBOMO05758
Pre Gene Modal
BGIBMGA006803
Annotation
PREDICTED:_integrin_beta-8-like_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.308
 

Sequence

CDS
ATGGCAGCGAAAAGACCGTTCGTTATGGATGAGCGCTGGGTATGTGCTGTTAAGGTCTCATGTTTTGATTGTTTGAAATTATCCCAATGCTCGTGGTGTGTAAAAGAAAACAAATGTTTCTCAAACGAGTTGTGGGGTAACAAAGGCCTCTGCGTAAACGATACTATCGAATTTACTGATTTTGGACTTAGTATCGTAGAGAACGCACAATGTTCATGTCAGAGCAAAGAAAATGAAGATAATTGCTTCTCTCCAGAGGTCACGAAGGGATTGAAATGCTCTGGACGGGGAACCTGTGTTTGCGGTCATTGTGTTTGTGATACTGATGCCGCTAATCCTTCTAAGATGATCATGGGGGAATACTGCGAGTATGATAATTTCTCCTGCGATGGGCCAAAATGCACCGAAGGCCCATATCACATCAGCCAGGTGTACGAAAACGACGGGTCATTTAAAGTATACAGAGACGACAGTTTAGTTGAAAAAGACTACTCTTCATAA
Protein
MAAKRPFVMDERWVCAVKVSCFDCLKLSQCSWCVKENKCFSNELWGNKGLCVNDTIEFTDFGLSIVENAQCSCQSKENEDNCFSPEVTKGLKCSGRGTCVCGHCVCDTDAANPSKMIMGEYCEYDNFSCDGPKCTEGPYHISQVYENDGSFKVYRDDSLVEKDYSS

Summary

Pfam
PF07974   EGF_2
Interpro
IPR013111   EGF_extracell        + More
IPR015812   Integrin_bsu       
PDB
5ES4     E-value=2.36017e-05,     Score=109

Ontologies

Topology

Length:
166
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0.0002
Total prob of N-in:
0.14332
outside
1  -  166
 
 

Population Genetic Test Statistics

Pi
206.737769
Theta
165.089884
Tajima's D
0.673059
CLR
0.632507
CSRT
0.56137193140343
Interpretation
Uncertain
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