Gene

KWMTBOMO05757

Pre Gene Modal

BGIBMGA006804

Annotation

PREDICTED:_tyrosine_decarboxylase_[Amyelois_transitella]

Location

Bomo_Chr10(-):9440417-9452554      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.065 PlasmaMembrane   Reliability : 1.412

CDS

ATGGATGTCGAAGAGTTTCGTGTGCGCGGTAAAGAGATGGTAGATTACATATGCACTTACATGAACACGTTGCGTACCCGGCGCGTTGTGCCCAGCGTGGAGCCAGGATACCTACGAACAGCACTTCCGGCCGAAGCTCCTCATCACCCCGAACCCTGGGACGATGTGATGAACGATGTCGAGCAAAAGATAATGCCAGGTGTAACACATTGGCAGCATCCACGTTTTCACGCATACTTTCCGGCAGGCAACGGGTACCCTTCGATACTCGGAGATATGTTGTCTGCTGGCATCGGATGCATTGGTTTTTCCTGGGCAGCAAGTCCCGCCTGTACTGAGCTAGAAATAATCATGTTGGATTGGATGGGAAAAGCGATTGGACTACCGCCTGCCTTTTTAGCGCTTGAAGAAGGTAGCAAAGGGGGCGGTGTTATCCAGGGATCTGCTAGTGAATGCGTTCTTGTATCTATGTTGGCTGCCAGAGCCAATGGAATTAAAAGATTAAAGCATCAATTTCCCAATGTTGACGAGGGACTTTTGCTATCAAAATTAATAGCATATTGTTCTAAGGAAGCCCATTCATGCGTCGAAAAGGCAGCCATGATTTGCTTTGTGAAACTTCGTATCTTACAGCCGGATGACAACGGTTCTCTTAGAGGTGAAACACTAAAGGAGGCTATGGAAGAAGATGAAGAGGCAGGGCGAGTACCGTTCTTTGTCGCTACGACATTGGGGACTACTTCATGTTGCTCCTTCGATAATTTGCCTGAAATAGGTCCCATGGTGCGGAAATTCCCTTGCGTCTGGCTTCACGTGGACGCCGCATATGCTGGAAGCTCATTCCTCTGCCCAGAACACAAGTATCACTTAGCTGGAGTTGAATATGCTGACTCCTTCAATACTAATCCTAATAAATTAATGCTTGCGAGTTTTGACTGTTCACTATTGTGGGTCACTAACCGCTATCTTCTAACATCTGCCCTCGTGGTTGATCCGTTGTATCTACAACATTGCTACGACCACACTGCTATCGATTATCGACACTGGGGTATATCGCTTAGTCGTCGTTTCCGTTCGCTTAAGCTATGGTTCATGTTGAGAAGTTACGGTATTAGCGGCTTGCAAAAATATGTCAGAAAGCATTGCGAACTGGCCAAATATTTTGAAAGGCTTGTCAAGAAAGACGATAGATTCCAAGTCTGCAATCAAGTAAGGTTGGGTTTGGTTTGCTTCCGCCTCGTTGGAGGTCCCGACGAGACTCCGGAGCAAATTGATGAGATGAACAAGAAACTCCTCACTAATATAAATGCATCTGGAAAACTGCATATGGTCCCGGCCTCTGTTCGGGAACGTTTTGTGATACGTTTCTGTGTGGTCGCTCAGCACGCTACACGTGAAGATATTGAAGTTGCTTGGGATATAATATCCGACTTTGCTACGGAGTTATTAGAGGGTCCGGATAAGGAAAGGGATCTAAACGAGGAACGTACTCGTCGCAATCGTGCCGCTCTAGCCCACAAACGTTCGTTCTTCGTACGTATGGTTAGCGATCCAAAGATCTATAATCCGGCTATCAACAAAACTCCACCACCGGTAGCTACATCTCCTCCTGGGTCACCACCCGCTGCTGCACCTTCCACGCCAGATACTCCATCCGACTCTGGCTCCATTCAACAGCCCACTACGCCGAAGCAATCGTCTTGGATAAGCTGGCCTCTTGGATTCTTTTTCCAGAGCGTTGATCACGACTCTAACGATTTGCCACTGAGATTTCGTCATCTCGACACGATGGTGAGGTTGAAGAGTCCCGGAGCAAGTCGTCGGGGCTCCACGCCGTGCGCCTCACCCGAACATCGGGCCTCGTCGCCCTCCAACAATCACTAA

Protein

MDVEEFRVRGKEMVDYICTYMNTLRTRRVVPSVEPGYLRTALPAEAPHHPEPWDDVMNDVEQKIMPGVTHWQHPRFHAYFPAGNGYPSILGDMLSAGIGCIGFSWAASPACTELEIIMLDWMGKAIGLPPAFLALEEGSKGGGVIQGSASECVLVSMLAARANGIKRLKHQFPNVDEGLLLSKLIAYCSKEAHSCVEKAAMICFVKLRILQPDDNGSLRGETLKEAMEEDEEAGRVPFFVATTLGTTSCCSFDNLPEIGPMVRKFPCVWLHVDAAYAGSSFLCPEHKYHLAGVEYADSFNTNPNKLMLASFDCSLLWVTNRYLLTSALVVDPLYLQHCYDHTAIDYRHWGISLSRRFRSLKLWFMLRSYGISGLQKYVRKHCELAKYFERLVKKDDRFQVCNQVRLGLVCFRLVGGPDETPEQIDEMNKKLLTNINASGKLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELLEGPDKERDLNEERTRRNRAALAHKRSFFVRMVSDPKIYNPAINKTPPPVATSPPGSPPAAAPSTPDTPSDSGSIQQPTTPKQSSWISWPLGFFFQSVDHDSNDLPLRFRHLDTMVRLKSPGASRRGSTPCASPEHRASSPSNNH

Cofactor

pyridoxal 5'-phosphate

Similarity

Belongs to the group II decarboxylase family.

Uniprot

A0A2A4JQI7   A0A2W1BU38   A0A0G3VFZ2   A0A2H1WFA6   H9JBA9   A0A194RC18   + More
A0A194Q8T4   A0A212F653   A0A0L7LQ13   A0A3S2P4I8   D6X389   B0WT43   Q17F96   B4NMH2   A0A1S4G848   B4J6J2   B4KNI7   A0A0M4EAN4   B4LK06   A0A1W4VF47   A0A0J9R6G5   B4P0Z8   A1Z6N4   B3NB37   A0A084VQQ1   A0A3B0JNG0   B4HQA4   B4GC74   B3MIP9   Q292Z5   A0A0R3NKV6   A0A182PZH8   A0A182NKM3   A0A0R1DSU5   A0A182IWE7   A0A336MRT6   A0A182XYJ0   A0A182RU01   A0A182VJL2   A0A182WZ30   A0A182KQV6   Q7PTH4   A0A182WJK6   A0A182UH83   A0A182P203   A0A0A1WWU3   A0A1I8N2R7   A0A0L0C2L5   A0A182FG49   A0A1I8P932   W8VJW9   A0A034V1P5   T1I5A1   W8BSM1   X2KSD2   A0A1J1IUG8   A0A182I2X6   A0A1A9YC03   E0VK92   W8C9H5   U4UGN6   N6TFJ6   E2ALW7   A0A088AVR5   A0A2A3ERL5   A0A195BWL8   A0A158NCJ3   A0A182MSY0   E9IM88   A0A195CQE1   A0A158NCJ2   A0A336MRS6   A0A0M8ZRE3   A0A026WVU1   A0A3L8DI55   E2BHY3   A0A1A9ZUY7   A0A1B0FC75   A0A1B0GJF5   A0A1A9W101   J9M312   A0A1A9UU25   A0A195F967   A0A151X5T7   A0A0L7RJA9   A0A3R7PEH3   F4WX53   A0A067QQI2   A0A1D1VF32   A0A2P8ZK26   T1IJC5   A0A2J7QH10   A0A1Y1KDP2   A0A0T6BC19   A0A1W4XJ75   A0A1Y3BWD0   A0A1W0WSW7   A0A0P5BGP2   A0A0P6GS82   A0A0P6I7Q2  

Pubmed

28756777    19121390    26354079    22118469    26227816    18362917    + More
19820115    17510324    17994087    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24438588    15632085    23185243    25244985    20966253    12364791    14747013    17210077    25830018    25315136    26108605    25348373    24495485    24646461    20566863    23537049    20798317    21347285    21282665    24508170    30249741    21719571    24845553    27649274    29403074    28004739   

EMBL

NWSH01000887    PCG73682.1    KZ149900    PZC78592.1    KP657629    AKL78854.1    + More
ODYU01008299    SOQ51765.1    BABH01030961    BABH01030962    KQ460398    KPJ15019.1    KQ459302    KPJ01814.1    AGBW02010077    OWR49204.1    JTDY01000364    KOB77527.1    RSAL01000493    RVE41539.1    KQ971372    EFA10348.1    DS232080    EDS34186.1    CH477272    EAT45251.1    CH964282    EDW85561.1    CH916367    EDW01993.1    CH933808    EDW08946.2    CP012524    ALC42171.1    CH940648    EDW61660.1    CM002911    KMY91772.1    CM000157    EDW89072.1    AE013599    BT083414    AAM70812.1    ACQ89823.1    CH954177    EDV59802.1    ATLV01015292    KE525006    KFB40295.1    OUUW01000001    SPP74181.1    CH480816    EDW46643.1    CH479181    EDW31392.1    CH902619    EDV38125.1    CM000071    EAL24715.2    KRT01490.1    KRT01491.1    KRT01492.1    AXCN02000551    KRJ98161.1    UFQT01001786    SSX31809.1    AAAB01008807    EAA03914.4    GBXI01011171    JAD03121.1    JRES01000975    KNC26593.1    AB897807    BAO52000.1    GAKP01023480    JAC35478.1    ACPB03016005    GAMC01006647    JAB99908.1    KJ152556    AHN85839.1    CVRI01000059    CRL03346.1    APCN01000188    DS235239    EEB13798.1    GAMC01006646    JAB99909.1    KB632136    ERL89055.1    APGK01029452    APGK01029453    APGK01029454    APGK01029455    APGK01029456    APGK01029457    KB740735    ENN79134.1    GL440682    EFN65559.1    KZ288198    PBC33681.1    KQ976396    KYM92977.1    ADTU01011942    AXCM01001173    GL764129    EFZ18462.1    KQ977408    KYN02931.1    UFQT01002012    SSX32405.1    KQ435922    KOX68436.1    KK107088    EZA59791.1    QOIP01000008    RLU19843.1    GL448390    EFN84699.1    CCAG010011030    AJWK01020251    ABLF02041125    ABLF02041147    KQ981727    KYN36983.1    KQ982490    KYQ55775.1    KQ414582    KOC70868.1    QCYY01003481    ROT63152.1    GL888417    EGI61296.1    KK853042    KDR12158.1    BDGG01000004    GAU97503.1    PYGN01000033    PSN56849.1    JH430253    NEVH01014358    PNF27872.1    GEZM01089377    JAV57516.1    LJIG01002050    KRT84890.1    MUJZ01000708    OTF84103.1    MTYJ01000051    OQV18280.1    GDIP01190175    JAJ33227.1    GDIQ01029522    JAN65215.1    GDIQ01010107    JAN84630.1   

Proteomes

UP000218220    UP000005204    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000283053    UP000007266    UP000002320    UP000008820    UP000007798    UP000001070    UP000009192    UP000092553    UP000008792    UP000192221    UP000002282    UP000000803    UP000008711    UP000030765    UP000268350    UP000001292    UP000008744    UP000007801    UP000001819    UP000075886    UP000075884    UP000075880    UP000076408    UP000075900    UP000075903    UP000076407    UP000075882    UP000007062    UP000075920    UP000075902    UP000075885    UP000095301    UP000037069    UP000069272    UP000095300    UP000015103    UP000183832    UP000075840    UP000092443    UP000009046    UP000030742    UP000019118    UP000000311    UP000005203    UP000242457    UP000078540    UP000005205    UP000075883    UP000078542    UP000053105    UP000053097    UP000279307    UP000008237    UP000092445    UP000092444    UP000092461    UP000091820    UP000007819    UP000078200    UP000078541    UP000075809    UP000053825    UP000283509    UP000007755    UP000027135    UP000186922    UP000245037    UP000235965    UP000192223   

PRIDE

H9JBA9    A1Z6N4   

Pfam

PF00282   Pyridoxal_deC        + More
PF13358   DDE_3
PF01498   HTH_Tnp_Tc3_2

Interpro

IPR015424   PyrdxlP-dep_Trfase        + More
IPR002129   PyrdxlP-dep_de-COase       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR015422   PyrdxlP-dep_Trfase_dom1       
IPR010977   Aromatic_deC       
IPR002492   Transposase_Tc1-like       
IPR038717   Tc1-like_DDE_dom       
IPR009057   Homeobox-like_sf       
IPR021115   Pyridoxal-P_BS       

SUPFAM

SSF53383   SSF53383        + More
SSF46689   SSF46689       

Gene 3D

3.40.640.10     3.90.1150.10    

ProteinModelPortal

A0A2A4JQI7   A0A2W1BU38   A0A0G3VFZ2   A0A2H1WFA6   H9JBA9   A0A194RC18   + More
A0A194Q8T4   A0A212F653   A0A0L7LQ13   A0A3S2P4I8   D6X389   B0WT43   Q17F96   B4NMH2   A0A1S4G848   B4J6J2   B4KNI7   A0A0M4EAN4   B4LK06   A0A1W4VF47   A0A0J9R6G5   B4P0Z8   A1Z6N4   B3NB37   A0A084VQQ1   A0A3B0JNG0   B4HQA4   B4GC74   B3MIP9   Q292Z5   A0A0R3NKV6   A0A182PZH8   A0A182NKM3   A0A0R1DSU5   A0A182IWE7   A0A336MRT6   A0A182XYJ0   A0A182RU01   A0A182VJL2   A0A182WZ30   A0A182KQV6   Q7PTH4   A0A182WJK6   A0A182UH83   A0A182P203   A0A0A1WWU3   A0A1I8N2R7   A0A0L0C2L5   A0A182FG49   A0A1I8P932   W8VJW9   A0A034V1P5   T1I5A1   W8BSM1   X2KSD2   A0A1J1IUG8   A0A182I2X6   A0A1A9YC03   E0VK92   W8C9H5   U4UGN6   N6TFJ6   E2ALW7   A0A088AVR5   A0A2A3ERL5   A0A195BWL8   A0A158NCJ3   A0A182MSY0   E9IM88   A0A195CQE1   A0A158NCJ2   A0A336MRS6   A0A0M8ZRE3   A0A026WVU1   A0A3L8DI55   E2BHY3   A0A1A9ZUY7   A0A1B0FC75   A0A1B0GJF5   A0A1A9W101   J9M312   A0A1A9UU25   A0A195F967   A0A151X5T7   A0A0L7RJA9   A0A3R7PEH3   F4WX53   A0A067QQI2   A0A1D1VF32   A0A2P8ZK26   T1IJC5   A0A2J7QH10   A0A1Y1KDP2   A0A0T6BC19   A0A1W4XJ75   A0A1Y3BWD0   A0A1W0WSW7   A0A0P5BGP2   A0A0P6GS82   A0A0P6I7Q2  

PDB

3RCH     E-value=2.28233e-153,     Score=1393

KEGG

101745224    K22329 tyrosine decarboxylase [EC:4.1.1.25] | (RefSeq) aromatic-L-amino-acid decarboxylase

PATHWAY

00350    Tyrosine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016831   GO:0030170   GO:0006520   GO:0004837   GO:0045475   GO:0048148   GO:0018991   GO:0007626   GO:0004058   GO:0016021   GO:0003824   GO:0019752   GO:0004568   GO:0006032   GO:0006541   GO:0016812   GO:0016597  

Length:

627

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.341990000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01523

outside

1  -  627

 

 

Pi

297.010825

Theta

195.034378

Tajima's D

1.712947

CLR

0.165922

CSRT

0.831158442077896

Interpretation

Uncertain